Experiment: Fructose-6-phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS17160 and ABI39_RS17165 are separated by 9 nucleotides ABI39_RS17165 and ABI39_RS17170 are separated by 39 nucleotides ABI39_RS17170 and ABI39_RS17175 are separated by 19 nucleotides ABI39_RS17175 and ABI39_RS17180 are separated by 10 nucleotides
ABI39_RS17160: ABI39_RS17160 - VWA domain-containing protein, at 4,340,836 to 4,341,858
_RS17160
ABI39_RS17165: ABI39_RS17165 - tetratricopeptide repeat protein, at 4,341,868 to 4,342,575
_RS17165
ABI39_RS17170: ABI39_RS17170 - protein BatD, at 4,342,615 to 4,344,450
_RS17170
ABI39_RS17175: ABI39_RS17175 - tetratricopeptide repeat protein, at 4,344,470 to 4,345,288
_RS17175
ABI39_RS17180: ABI39_RS17180 - phosphatase PAP2 family protein, at 4,345,299 to 4,346,006
_RS17180
Position (kb) 4342
4343
4344
4345 Strain fitness (log2 ratio) -1
0
1
2 at 4341.646 kb on + strand, within ABI39_RS17160 at 4341.646 kb on + strand, within ABI39_RS17160 at 4341.646 kb on + strand, within ABI39_RS17160 at 4341.657 kb on - strand, within ABI39_RS17160 at 4341.664 kb on - strand, within ABI39_RS17160 at 4341.736 kb on + strand, within ABI39_RS17160 at 4341.808 kb on - strand at 4341.903 kb on - strand at 4341.970 kb on + strand, within ABI39_RS17165 at 4342.643 kb on + strand at 4343.156 kb on - strand, within ABI39_RS17170 at 4343.555 kb on + strand, within ABI39_RS17170 at 4343.595 kb on + strand, within ABI39_RS17170 at 4343.739 kb on - strand, within ABI39_RS17170 at 4343.821 kb on - strand, within ABI39_RS17170 at 4344.010 kb on + strand, within ABI39_RS17170 at 4344.070 kb on - strand, within ABI39_RS17170 at 4344.190 kb on + strand, within ABI39_RS17170 at 4344.191 kb on - strand, within ABI39_RS17170 at 4344.268 kb on - strand at 4344.335 kb on + strand at 4344.336 kb on - strand at 4344.385 kb on - strand at 4344.395 kb on + strand at 4344.397 kb on + strand at 4344.626 kb on + strand, within ABI39_RS17175 at 4344.626 kb on + strand, within ABI39_RS17175 at 4344.628 kb on + strand, within ABI39_RS17175 at 4344.660 kb on + strand, within ABI39_RS17175 at 4344.661 kb on - strand, within ABI39_RS17175 at 4344.661 kb on - strand, within ABI39_RS17175 at 4344.662 kb on + strand, within ABI39_RS17175 at 4344.662 kb on + strand, within ABI39_RS17175 at 4344.663 kb on - strand, within ABI39_RS17175 at 4344.671 kb on - strand, within ABI39_RS17175 at 4344.739 kb on + strand, within ABI39_RS17175 at 4344.841 kb on - strand, within ABI39_RS17175 at 4344.928 kb on + strand, within ABI39_RS17175 at 4344.929 kb on - strand, within ABI39_RS17175 at 4345.105 kb on + strand, within ABI39_RS17175 at 4345.109 kb on - strand, within ABI39_RS17175 at 4345.109 kb on - strand, within ABI39_RS17175 at 4345.110 kb on + strand, within ABI39_RS17175 at 4345.306 kb on + strand at 4345.408 kb on + strand, within ABI39_RS17180 at 4345.435 kb on + strand, within ABI39_RS17180 at 4345.435 kb on + strand, within ABI39_RS17180 at 4345.438 kb on - strand, within ABI39_RS17180 at 4345.438 kb on - strand, within ABI39_RS17180
Per-strain Table
Position Strand Gene LocusTag Fraction Fructose-6-phosphate (C) remove 4,341,646 + ABI39_RS17160 0.79 +0.3 4,341,646 + ABI39_RS17160 0.79 +0.5 4,341,646 + ABI39_RS17160 0.79 +0.8 4,341,657 - ABI39_RS17160 0.80 +0.5 4,341,664 - ABI39_RS17160 0.81 -0.4 4,341,736 + ABI39_RS17160 0.88 +1.0 4,341,808 - +1.0 4,341,903 - -0.4 4,341,970 + ABI39_RS17165 0.14 +0.5 4,342,643 + +0.3 4,343,156 - ABI39_RS17170 0.29 +0.8 4,343,555 + ABI39_RS17170 0.51 +0.3 4,343,595 + ABI39_RS17170 0.53 -0.8 4,343,739 - ABI39_RS17170 0.61 +0.3 4,343,821 - ABI39_RS17170 0.66 +0.1 4,344,010 + ABI39_RS17170 0.76 +0.3 4,344,070 - ABI39_RS17170 0.79 +1.5 4,344,190 + ABI39_RS17170 0.86 -0.3 4,344,191 - ABI39_RS17170 0.86 +0.1 4,344,268 - -0.1 4,344,335 + +0.3 4,344,336 - +1.3 4,344,385 - +1.8 4,344,395 + +0.5 4,344,397 + +0.8 4,344,626 + ABI39_RS17175 0.19 +0.3 4,344,626 + ABI39_RS17175 0.19 +0.7 4,344,628 + ABI39_RS17175 0.19 -0.6 4,344,660 + ABI39_RS17175 0.23 -0.7 4,344,661 - ABI39_RS17175 0.23 +2.0 4,344,661 - ABI39_RS17175 0.23 -0.7 4,344,662 + ABI39_RS17175 0.23 -0.1 4,344,662 + ABI39_RS17175 0.23 +0.1 4,344,663 - ABI39_RS17175 0.24 +0.6 4,344,671 - ABI39_RS17175 0.25 +1.7 4,344,739 + ABI39_RS17175 0.33 -0.2 4,344,841 - ABI39_RS17175 0.45 +0.3 4,344,928 + ABI39_RS17175 0.56 -1.2 4,344,929 - ABI39_RS17175 0.56 +0.8 4,345,105 + ABI39_RS17175 0.78 +1.0 4,345,109 - ABI39_RS17175 0.78 +1.0 4,345,109 - ABI39_RS17175 0.78 +0.9 4,345,110 + ABI39_RS17175 0.78 +0.6 4,345,306 + +0.6 4,345,408 + ABI39_RS17180 0.15 -1.1 4,345,435 + ABI39_RS17180 0.19 -0.8 4,345,435 + ABI39_RS17180 0.19 -1.0 4,345,438 - ABI39_RS17180 0.20 -0.2 4,345,438 - ABI39_RS17180 0.20 -0.7
Or see this region's nucleotide sequence