Experiment: Fructose-6-phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS06005 and ABI39_RS06010 are separated by 23 nucleotides ABI39_RS06010 and ABI39_RS06015 are separated by 70 nucleotides
ABI39_RS06005: ABI39_RS06005 - beta-glucosidase, at 1,668,551 to 1,669,908
_RS06005
ABI39_RS06010: ABI39_RS06010 - polysaccharide deacetylase family protein, at 1,669,932 to 1,670,543
_RS06010
ABI39_RS06015: ABI39_RS06015 - DUF2723 domain-containing protein, at 1,670,614 to 1,674,018
_RS06015
Position (kb)
1669
1670
1671 Strain fitness (log2 ratio)
-2
-1
0
1 at 1668.941 kb on - strand, within ABI39_RS06005 at 1668.996 kb on + strand, within ABI39_RS06005 at 1669.065 kb on - strand, within ABI39_RS06005 at 1669.065 kb on - strand, within ABI39_RS06005 at 1669.065 kb on - strand, within ABI39_RS06005 at 1669.231 kb on - strand, within ABI39_RS06005 at 1669.236 kb on + strand, within ABI39_RS06005 at 1669.237 kb on + strand, within ABI39_RS06005 at 1669.237 kb on - strand, within ABI39_RS06005 at 1669.242 kb on + strand, within ABI39_RS06005 at 1669.523 kb on - strand, within ABI39_RS06005 at 1669.680 kb on - strand, within ABI39_RS06005 at 1669.800 kb on - strand at 1669.848 kb on + strand at 1669.898 kb on - strand at 1669.900 kb on - strand at 1669.942 kb on - strand at 1669.997 kb on - strand, within ABI39_RS06010 at 1670.060 kb on - strand, within ABI39_RS06010 at 1670.068 kb on - strand, within ABI39_RS06010 at 1670.164 kb on + strand, within ABI39_RS06010 at 1670.165 kb on - strand, within ABI39_RS06010 at 1670.249 kb on - strand, within ABI39_RS06010 at 1670.286 kb on - strand, within ABI39_RS06010 at 1670.384 kb on + strand, within ABI39_RS06010 at 1670.387 kb on + strand, within ABI39_RS06010 at 1670.388 kb on - strand, within ABI39_RS06010 at 1670.388 kb on - strand, within ABI39_RS06010 at 1670.568 kb on + strand at 1670.574 kb on + strand at 1670.577 kb on - strand at 1670.639 kb on - strand at 1670.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fructose-6-phosphate (C) remove 1,668,941 - ABI39_RS06005 0.29 +0.5 1,668,996 + ABI39_RS06005 0.33 -0.8 1,669,065 - ABI39_RS06005 0.38 -0.2 1,669,065 - ABI39_RS06005 0.38 -0.2 1,669,065 - ABI39_RS06005 0.38 -0.3 1,669,231 - ABI39_RS06005 0.50 +0.4 1,669,236 + ABI39_RS06005 0.50 -0.3 1,669,237 + ABI39_RS06005 0.51 -0.3 1,669,237 - ABI39_RS06005 0.51 -0.6 1,669,242 + ABI39_RS06005 0.51 -0.6 1,669,523 - ABI39_RS06005 0.72 -1.1 1,669,680 - ABI39_RS06005 0.83 +0.5 1,669,800 - -0.2 1,669,848 + -0.3 1,669,898 - -0.4 1,669,900 - +0.2 1,669,942 - -1.1 1,669,997 - ABI39_RS06010 0.11 -1.7 1,670,060 - ABI39_RS06010 0.21 -0.2 1,670,068 - ABI39_RS06010 0.22 -0.7 1,670,164 + ABI39_RS06010 0.38 -1.5 1,670,165 - ABI39_RS06010 0.38 -1.1 1,670,249 - ABI39_RS06010 0.52 -1.0 1,670,286 - ABI39_RS06010 0.58 -2.0 1,670,384 + ABI39_RS06010 0.74 -0.7 1,670,387 + ABI39_RS06010 0.74 -1.3 1,670,388 - ABI39_RS06010 0.75 -2.0 1,670,388 - ABI39_RS06010 0.75 -1.2 1,670,568 + +0.0 1,670,574 + -0.7 1,670,577 - -1.3 1,670,639 - +0.4 1,670,859 - +0.3
Or see this region's nucleotide sequence