Strain Fitness in Escherichia coli ECRC62 around BNILDI_15165

Experiment: MPec2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MPec2
3,054,264	+	yedE	BNILDI_15155	0.72	-1.0
3,054,293	-	yedE	BNILDI_15155	0.74	+0.1
3,054,293	-	yedE	BNILDI_15155	0.74	+0.3
3,054,343	-	yedE	BNILDI_15155	0.79	+0.1
3,054,374	-	yedE	BNILDI_15155	0.81	+1.4
3,054,397	-	yedE	BNILDI_15155	0.83	-0.3
3,054,397	-	yedE	BNILDI_15155	0.83	-0.3
3,054,509	+				+1.7
3,054,516	+				-0.9
3,054,565	-				+0.3
3,054,606	+				+0.3
3,054,607	-				+0.1
3,054,649	+				+0.9
3,054,649	+				+1.4
3,054,699	-				+0.8
3,054,748	-				+1.0
3,054,850	+	yedD	BNILDI_15160	0.15	-0.6
3,055,061	+	yedD	BNILDI_15160	0.66	-1.3
3,055,076	-	yedD	BNILDI_15160	0.70	+0.7
3,055,108	+	yedD	BNILDI_15160	0.78	+2.1
3,055,116	+	yedD	BNILDI_15160	0.79	+1.1
3,055,312	+				+1.7
3,055,315	+				-1.5
3,055,356	+				+1.4
3,055,363	+				+0.0
3,055,380	+				-0.6
3,055,487	-	amyA	BNILDI_15165	0.17	+0.5
3,055,487	-	amyA	BNILDI_15165	0.17	-1.3
3,055,495	+	amyA	BNILDI_15165	0.18	-1.6
3,055,528	+	amyA	BNILDI_15165	0.20	+0.1
3,055,558	-	amyA	BNILDI_15165	0.22	-1.4
3,055,558	-	amyA	BNILDI_15165	0.22	+1.4
3,055,667	+	amyA	BNILDI_15165	0.29	-1.8
3,055,775	-	amyA	BNILDI_15165	0.36	+0.1
3,055,805	+	amyA	BNILDI_15165	0.38	-1.2
3,055,891	-	amyA	BNILDI_15165	0.44	-0.3
3,055,892	+	amyA	BNILDI_15165	0.44	+0.3
3,055,892	+	amyA	BNILDI_15165	0.44	+2.2
3,055,893	-	amyA	BNILDI_15165	0.44	+0.1
3,055,893	-	amyA	BNILDI_15165	0.44	-0.2
3,055,893	-	amyA	BNILDI_15165	0.44	+0.1
3,055,893	-	amyA	BNILDI_15165	0.44	+0.4
3,055,967	-	amyA	BNILDI_15165	0.49	+0.7
3,056,137	-	amyA	BNILDI_15165	0.61	-0.5
3,056,242	-	amyA	BNILDI_15165	0.68	+0.2
3,056,274	-	amyA	BNILDI_15165	0.70	+0.1
3,056,363	-	amyA	BNILDI_15165	0.76	+0.4
3,056,492	+	amyA	BNILDI_15165	0.85	-0.0
3,056,493	-	amyA	BNILDI_15165	0.85	-0.3
3,056,539	+	amyA	BNILDI_15165	0.88	-1.0
3,056,540	-	amyA	BNILDI_15165	0.88	+1.7
3,056,547	-	amyA	BNILDI_15165	0.88	-1.9
3,056,586	+				-0.7
3,056,586	+				+0.0
3,056,589	-				-0.7
3,056,622	+				+2.7
3,056,628	+				+0.8
3,056,702	-				-0.1
3,056,748	+				+0.7
3,056,748	+				-0.3
3,056,786	-				+0.5
3,056,856	+	fliT	BNILDI_15170	0.16	+1.0
3,056,856	+	fliT	BNILDI_15170	0.16	-0.8
3,056,857	-	fliT	BNILDI_15170	0.16	-0.3
3,056,919	+	fliT	BNILDI_15170	0.33	+0.9
3,056,919	+	fliT	BNILDI_15170	0.33	-0.3
3,056,931	+	fliT	BNILDI_15170	0.36	-0.7
3,056,932	-	fliT	BNILDI_15170	0.36	+1.7
3,057,046	+	fliT	BNILDI_15170	0.67	+0.1
3,057,198	-				+0.4
3,057,301	+	fliS	BNILDI_15175	0.33	-1.6
3,057,302	-	fliS	BNILDI_15175	0.34	-1.2
3,057,303	+	fliS	BNILDI_15175	0.34	+0.1
3,057,303	+	fliS	BNILDI_15175	0.34	-0.2
3,057,303	+	fliS	BNILDI_15175	0.34	-0.2
3,057,304	-	fliS	BNILDI_15175	0.34	-0.0
3,057,304	-	fliS	BNILDI_15175	0.34	-0.4
3,057,304	-	fliS	BNILDI_15175	0.34	-0.3
3,057,304	-	fliS	BNILDI_15175	0.34	+1.3
3,057,307	+	fliS	BNILDI_15175	0.35	+1.4
3,057,308	-	fliS	BNILDI_15175	0.35	-0.3
3,057,310	-	fliS	BNILDI_15175	0.36	-1.1
3,057,440	-	fliS	BNILDI_15175	0.67	+2.4
3,057,440	-	fliS	BNILDI_15175	0.67	-0.9
3,057,482	+	fliS	BNILDI_15175	0.77	+0.3
3,057,570	+				-0.0
3,057,593	+				+1.0
3,057,594	-				-0.1
3,057,600	+				-1.0
3,057,601	-				-0.3
3,057,610	+				-1.8