Strain Fitness in Escherichia coli ECRC62 around BNILDI_14615

Experiment: MPec2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MPec2
2,950,824	-	manC	BNILDI_14605	0.54	-0.2
2,950,982	+	manC	BNILDI_14605	0.65	+0.4
2,950,982	+	manC	BNILDI_14605	0.65	-0.4
2,950,988	+	manC	BNILDI_14605	0.65	-0.6
2,951,174	+	manC	BNILDI_14605	0.78	-0.0
2,951,174	+	manC	BNILDI_14605	0.78	-0.0
2,951,174	+	manC	BNILDI_14605	0.78	-0.6
2,951,175	-	manC	BNILDI_14605	0.78	-0.0
2,951,182	+	manC	BNILDI_14605	0.79	-0.3
2,951,351	+				-0.7
2,951,352	-				-1.6
2,951,352	-				-0.1
2,951,353	+				+1.4
2,951,354	-				+0.4
2,951,354	-				-0.1
2,951,409	+				-2.0
2,951,410	-				+0.4
2,951,483	+				-1.6
2,951,484	-				+2.1
2,951,538	+				-0.0
2,951,539	-				+1.4
2,951,562	+				-0.9
2,951,562	+				-1.5
2,951,651	-				+0.6
2,951,698	-				-0.2
2,951,698	-				-0.9
2,951,794	-				+0.7
2,951,859	+				+0.6
2,952,075	+	cpsG	BNILDI_14615	0.23	-0.0
2,952,083	+	cpsG	BNILDI_14615	0.23	+0.6
2,952,212	+	cpsG	BNILDI_14615	0.33	+0.4
2,952,212	+	cpsG	BNILDI_14615	0.33	+0.1
2,952,251	+	cpsG	BNILDI_14615	0.35	+0.7
2,952,251	+	cpsG	BNILDI_14615	0.35	-0.1
2,952,251	+	cpsG	BNILDI_14615	0.35	-1.5
2,952,251	+	cpsG	BNILDI_14615	0.35	-0.6
2,952,252	-	cpsG	BNILDI_14615	0.35	-0.9
2,952,555	+	cpsG	BNILDI_14615	0.58	-0.1
2,952,555	+	cpsG	BNILDI_14615	0.58	+1.7
2,952,556	-	cpsG	BNILDI_14615	0.58	+0.3
2,952,558	+	cpsG	BNILDI_14615	0.58	+0.1
2,952,559	-	cpsG	BNILDI_14615	0.58	-0.3
2,952,559	-	cpsG	BNILDI_14615	0.58	-0.2
2,952,559	-	cpsG	BNILDI_14615	0.58	+0.0
2,952,559	-	cpsG	BNILDI_14615	0.58	+0.1
2,952,559	-	cpsG	BNILDI_14615	0.58	+0.7
2,952,708	-	cpsG	BNILDI_14615	0.69	-0.4
2,952,716	+	cpsG	BNILDI_14615	0.69	-0.2
2,952,716	+	cpsG	BNILDI_14615	0.69	+1.1
2,952,717	-	cpsG	BNILDI_14615	0.69	+1.0
2,952,717	-	cpsG	BNILDI_14615	0.69	+1.3
2,952,738	+	cpsG	BNILDI_14615	0.71	-1.5
2,952,738	+	cpsG	BNILDI_14615	0.71	+0.0
2,952,739	-	cpsG	BNILDI_14615	0.71	+2.1
2,952,739	-	cpsG	BNILDI_14615	0.71	+0.1
2,952,765	+	cpsG	BNILDI_14615	0.73	-0.9
2,953,134	+				+1.7
2,953,177	+				+0.5
2,953,245	-				-0.3
2,953,245	-				-0.6
2,953,289	-				+0.9
2,953,326	+				-0.4
2,953,360	+	wcaJ	BNILDI_14620	0.12	+1.0
2,953,459	+	wcaJ	BNILDI_14620	0.19	+0.6
2,953,578	-	wcaJ	BNILDI_14620	0.28	+0.2
2,953,614	+	wcaJ	BNILDI_14620	0.30	-1.4
2,953,616	+	wcaJ	BNILDI_14620	0.30	+2.7
2,953,815	+	wcaJ	BNILDI_14620	0.45	-0.4
2,953,816	-	wcaJ	BNILDI_14620	0.45	+0.3
2,953,914	-	wcaJ	BNILDI_14620	0.52	-0.1
2,954,009	-	wcaJ	BNILDI_14620	0.59	-0.5
2,954,009	-	wcaJ	BNILDI_14620	0.59	-1.0
2,954,043	-	wcaJ	BNILDI_14620	0.61	-0.8
2,954,043	-	wcaJ	BNILDI_14620	0.61	-0.4
2,954,075	+	wcaJ	BNILDI_14620	0.63	-0.6