Strain Fitness in Escherichia coli ECRC62 around BNILDI_06730

Experiment: MPec2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MPec2
1,345,617	+				+2.1
1,345,632	-				+0.5
1,345,632	-				-0.7
1,345,764	+				-0.0
1,345,764	+				+0.8
1,345,767	-				-0.2
1,345,768	+				-0.2
1,345,769	-				-0.5
1,345,769	-				+3.0
1,345,769	-				+0.5
1,345,808	-				-0.3
1,345,831	-				+0.3
1,345,831	-				-0.4
1,345,844	+				-0.5
1,345,967	-	yjdI	BNILDI_06720	0.44	-0.7
1,345,988	+	yjdI	BNILDI_06720	0.53	-0.4
1,346,058	-	yjdI	BNILDI_06720	0.83	-0.8
1,346,082	+				-2.7
1,346,219	-	yjdJ	BNILDI_06725	0.41	+1.0
1,346,312	-	yjdJ	BNILDI_06725	0.75	+0.3
1,346,319	+	yjdJ	BNILDI_06725	0.77	+2.0
1,346,319	+	yjdJ	BNILDI_06725	0.77	+1.0
1,346,360	+				-0.5
1,346,361	-				-0.6
1,346,535	-				-0.7
1,346,603	+				-0.6
1,346,700	+	ghoS	BNILDI_06730	0.31	-1.6
1,346,701	-	ghoS	BNILDI_06730	0.32	-0.7
1,346,701	-	ghoS	BNILDI_06730	0.32	+1.3
1,346,822	+	ghoS	BNILDI_06730	0.72	-0.4
1,346,865	-	ghoS	BNILDI_06730	0.87	-0.1
1,346,980	+	ghoT	BNILDI_06735	0.28	+2.0
1,346,981	-	ghoT	BNILDI_06735	0.29	-0.4
1,346,994	-	ghoT	BNILDI_06735	0.36	-0.3
1,347,023	+	ghoT	BNILDI_06735	0.53	+0.1
1,347,111	+				+0.1
1,347,111	+				+0.4
1,347,112	-				-0.3
1,347,213	-				-0.6
1,347,256	-				+1.0
1,347,256	-				+1.0
1,347,268	-				+1.3
1,347,271	-				-0.1
1,347,271	-				-0.0
1,347,271	-				-0.1
1,347,271	-				-1.1
1,347,292	-				-0.4
1,347,313	-				-0.8
1,347,359	+				-0.5
1,347,359	+				-0.2
1,347,372	-				+0.3
1,347,573	+	lysS	BNILDI_06740	0.23	+0.0
1,347,630	+	lysS	BNILDI_06740	0.27	-0.8
1,347,631	-	lysS	BNILDI_06740	0.27	+1.4
1,347,631	-	lysS	BNILDI_06740	0.27	+0.4
1,347,631	-	lysS	BNILDI_06740	0.27	+1.1
1,347,631	-	lysS	BNILDI_06740	0.27	+0.3
1,347,660	+	lysS	BNILDI_06740	0.29	-0.4
1,347,680	-	lysS	BNILDI_06740	0.30	+1.0
1,347,734	+	lysS	BNILDI_06740	0.34	-0.2
1,347,813	+	lysS	BNILDI_06740	0.39	+0.8
1,347,890	+	lysS	BNILDI_06740	0.44	+0.7
1,347,900	-	lysS	BNILDI_06740	0.45	+1.4