Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03356

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 nt MPMX19_03356: MPMX19_03356 - tRNA-Asp, at 726,294 to 726,392 _03356 Position (kb) 726 727Strain fitness (log2 ratio) -2 -1 0 1at 725.320 kb on + strandat 725.320 kb on + strandat 725.321 kb on - strandat 726.891 kb on + strandat 726.891 kb on + strandat 726.891 kb on + strandat 726.891 kb on + strandat 726.891 kb on + strandat 726.891 kb on + strandat 726.891 kb on + strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 726.892 kb on - strandat 727.113 kb on + strandat 727.113 kb on + strandat 727.114 kb on - strandat 727.392 kb on + strandat 727.392 kb on + strandat 727.392 kb on + strandat 727.392 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
remove
725,320 + -0.6
725,320 + -0.1
725,321 - +0.5
726,891 + +1.3
726,891 + -0.1
726,891 + +0.2
726,891 + +1.5
726,891 + -0.5
726,891 + +0.2
726,891 + -0.7
726,892 - -0.9
726,892 - -0.2
726,892 - -0.6
726,892 - -0.7
726,892 - -1.4
726,892 - +0.2
726,892 - +0.3
726,892 - -0.7
726,892 - -0.4
726,892 - -1.1
726,892 - +0.2
726,892 - -1.8
726,892 - -0.0
726,892 - -0.4
726,892 - -0.4
726,892 - +0.9
727,113 + +0.3
727,113 + -1.1
727,114 - +0.2
727,392 + +0.3
727,392 + -0.5
727,392 + +0.3
727,392 + +0.9

Or see this region's nucleotide sequence