Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02698

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,823,521	+		MPMX19_02697	0.35	-0.3
2,823,521	+		MPMX19_02697	0.35	+0.6
2,823,521	+		MPMX19_02697	0.35	-0.7
2,823,521	+		MPMX19_02697	0.35	+0.7
2,823,521	+		MPMX19_02697	0.35	-0.6
2,823,521	+		MPMX19_02697	0.35	-0.3
2,823,521	+		MPMX19_02697	0.35	-1.3
2,823,521	+		MPMX19_02697	0.35	+0.2
2,823,521	+		MPMX19_02697	0.35	+0.3
2,823,522	-		MPMX19_02697	0.35	-1.3
2,823,548	+		MPMX19_02697	0.37	+0.7
2,823,549	-		MPMX19_02697	0.37	+1.0
2,823,549	-		MPMX19_02697	0.37	-1.0
2,823,549	-		MPMX19_02697	0.37	+0.4
2,823,668	+		MPMX19_02697	0.46	-0.6
2,823,696	+		MPMX19_02697	0.48	-0.5
2,823,696	+		MPMX19_02697	0.48	-0.9
2,823,696	+		MPMX19_02697	0.48	-0.4
2,823,696	+		MPMX19_02697	0.48	-0.9
2,823,696	+		MPMX19_02697	0.48	-0.2
2,823,696	+		MPMX19_02697	0.48	-1.6
2,823,696	+		MPMX19_02697	0.48	-1.8
2,823,696	+		MPMX19_02697	0.48	-0.2
2,823,696	+		MPMX19_02697	0.48	-0.3
2,823,696	+		MPMX19_02697	0.48	+0.2
2,823,696	+		MPMX19_02697	0.48	-0.9
2,823,696	+		MPMX19_02697	0.48	-0.8
2,823,697	-		MPMX19_02697	0.48	-1.1
2,823,697	-		MPMX19_02697	0.48	-1.3
2,823,697	-		MPMX19_02697	0.48	-1.0
2,823,697	-		MPMX19_02697	0.48	-0.1
2,823,697	-		MPMX19_02697	0.48	-1.3
2,823,697	-		MPMX19_02697	0.48	-1.3
2,823,697	-		MPMX19_02697	0.48	+0.1
2,823,697	-		MPMX19_02697	0.48	-1.9
2,823,697	-		MPMX19_02697	0.48	-0.3
2,823,710	+		MPMX19_02697	0.49	+0.8
2,823,765	+		MPMX19_02697	0.52	+0.8
2,823,765	+		MPMX19_02697	0.52	-0.6
2,823,765	+		MPMX19_02697	0.52	-0.7
2,823,766	-		MPMX19_02697	0.52	-0.9
2,823,766	-		MPMX19_02697	0.52	-1.0
2,823,770	+		MPMX19_02697	0.53	-1.5
2,823,770	+		MPMX19_02697	0.53	-0.6
2,823,770	+		MPMX19_02697	0.53	+0.8
2,823,770	+		MPMX19_02697	0.53	+0.2
2,823,770	+		MPMX19_02697	0.53	+0.7
2,823,771	-		MPMX19_02697	0.53	-0.2
2,823,771	-		MPMX19_02697	0.53	+0.7
2,823,771	-		MPMX19_02697	0.53	-2.0
2,823,771	-		MPMX19_02697	0.53	+0.2
2,823,771	-		MPMX19_02697	0.53	-2.0
2,823,771	-		MPMX19_02697	0.53	+0.3
2,823,780	+		MPMX19_02697	0.53	-0.3
2,823,780	+		MPMX19_02697	0.53	+0.1
2,823,780	+		MPMX19_02697	0.53	-0.7
2,823,780	+		MPMX19_02697	0.53	+0.1
2,823,780	+		MPMX19_02697	0.53	-1.7
2,823,780	+		MPMX19_02697	0.53	+0.1
2,823,781	-		MPMX19_02697	0.54	-2.0
2,823,781	-		MPMX19_02697	0.54	+0.7
2,823,781	-		MPMX19_02697	0.54	-0.4
2,823,781	-		MPMX19_02697	0.54	-0.4
2,823,781	-		MPMX19_02697	0.54	-0.4
2,823,781	-		MPMX19_02697	0.54	-1.7
2,823,781	-		MPMX19_02697	0.54	-1.8
2,823,781	-		MPMX19_02697	0.54	+0.4
2,823,781	-		MPMX19_02697	0.54	-0.5
2,823,781	-		MPMX19_02697	0.54	-0.0
2,823,816	+		MPMX19_02697	0.56	-1.5
2,823,816	+		MPMX19_02697	0.56	+0.8
2,823,816	+		MPMX19_02697	0.56	-1.1
2,823,816	+		MPMX19_02697	0.56	-1.3
2,823,816	+		MPMX19_02697	0.56	-0.3
2,823,816	+		MPMX19_02697	0.56	+0.5
2,823,816	+		MPMX19_02697	0.56	+0.7
2,823,816	+		MPMX19_02697	0.56	-1.0
2,823,817	-		MPMX19_02697	0.56	-0.2
2,823,817	-		MPMX19_02697	0.56	+0.3
2,823,817	-		MPMX19_02697	0.56	-0.6
2,823,817	-		MPMX19_02697	0.56	-0.5
2,823,880	+		MPMX19_02697	0.60	+0.5
2,823,880	+		MPMX19_02697	0.60	+1.3
2,823,880	+		MPMX19_02697	0.60	-1.1
2,823,880	+		MPMX19_02697	0.60	-1.3
2,823,881	-		MPMX19_02697	0.60	+0.4
2,823,881	-		MPMX19_02697	0.60	+1.2
2,823,881	-		MPMX19_02697	0.60	+0.3
2,823,881	-		MPMX19_02697	0.60	+0.3
2,823,881	-		MPMX19_02697	0.60	-0.9
2,823,881	-		MPMX19_02697	0.60	+0.1
2,823,881	-		MPMX19_02697	0.60	-1.1
2,823,881	-		MPMX19_02697	0.60	-1.5
2,823,895	+		MPMX19_02697	0.61	+0.4
2,823,895	+		MPMX19_02697	0.61	-0.6
2,823,895	+		MPMX19_02697	0.61	-0.4
2,823,895	+		MPMX19_02697	0.61	-1.1
2,823,895	+		MPMX19_02697	0.61	+0.1
2,823,895	+		MPMX19_02697	0.61	-1.9
2,823,895	+		MPMX19_02697	0.61	-0.7
2,823,895	+		MPMX19_02697	0.61	-0.1
2,823,895	+		MPMX19_02697	0.61	+0.7
2,823,895	+		MPMX19_02697	0.61	-0.7
2,823,896	-		MPMX19_02697	0.62	+0.5
2,823,896	-		MPMX19_02697	0.62	-1.9
2,823,896	-		MPMX19_02697	0.62	-0.3
2,823,896	-		MPMX19_02697	0.62	-0.6
2,823,896	-		MPMX19_02697	0.62	-0.2
2,823,950	+		MPMX19_02697	0.65	+1.3
2,823,950	+		MPMX19_02697	0.65	-0.3
2,823,950	+		MPMX19_02697	0.65	-1.0
2,823,950	+		MPMX19_02697	0.65	+1.3
2,823,950	+		MPMX19_02697	0.65	+1.2
2,823,950	+		MPMX19_02697	0.65	-2.3
2,823,951	-		MPMX19_02697	0.65	-0.6
2,823,951	-		MPMX19_02697	0.65	-0.2
2,823,951	-		MPMX19_02697	0.65	+0.9
2,824,043	+		MPMX19_02697	0.72	-0.9
2,824,043	+		MPMX19_02697	0.72	-0.7
2,824,043	+		MPMX19_02697	0.72	+0.4
2,824,044	-		MPMX19_02697	0.72	-0.1
2,824,069	+		MPMX19_02697	0.74	-1.8
2,824,069	+		MPMX19_02697	0.74	+0.1
2,824,069	+		MPMX19_02697	0.74	-0.2
2,824,069	+		MPMX19_02697	0.74	-0.1
2,824,069	+		MPMX19_02697	0.74	-0.8
2,824,069	+		MPMX19_02697	0.74	-0.7
2,824,069	+		MPMX19_02697	0.74	-0.2
2,824,069	+		MPMX19_02697	0.74	-1.1
2,824,070	-		MPMX19_02697	0.74	-1.1
2,824,070	-		MPMX19_02697	0.74	+0.1
2,824,070	-		MPMX19_02697	0.74	+0.2
2,824,070	-		MPMX19_02697	0.74	-0.2
2,824,070	-		MPMX19_02697	0.74	-0.2
2,824,173	+		MPMX19_02697	0.81	+0.1
2,824,173	+		MPMX19_02697	0.81	+0.3
2,824,173	+		MPMX19_02697	0.81	-1.6
2,824,173	+		MPMX19_02697	0.81	+0.7
2,824,173	+		MPMX19_02697	0.81	+2.1
2,824,173	+		MPMX19_02697	0.81	-0.3
2,824,173	+		MPMX19_02697	0.81	+1.2
2,824,173	+		MPMX19_02697	0.81	+0.7
2,824,173	+		MPMX19_02697	0.81	-0.0
2,824,174	-		MPMX19_02697	0.81	-1.6
2,824,174	-		MPMX19_02697	0.81	-0.9
2,824,174	-		MPMX19_02697	0.81	-1.9
2,824,174	-		MPMX19_02697	0.81	-1.0
2,824,174	-		MPMX19_02697	0.81	-0.2
2,824,174	-		MPMX19_02697	0.81	-0.8
2,824,174	-		MPMX19_02697	0.81	-2.8
2,824,174	-		MPMX19_02697	0.81	-1.2
2,824,379	+				-1.0
2,824,379	+				-0.9
2,824,379	+				-0.9
2,824,379	+				+0.7
2,824,379	+				-0.4
2,824,379	+				-0.3
2,824,379	+				+0.4
2,824,379	+				+0.7
2,824,379	+				+0.4
2,824,379	+				-0.1
2,824,379	+				-0.2
2,824,379	+				+1.9
2,824,380	-				-0.9
2,824,380	-				+1.0
2,824,380	-				-1.1
2,824,380	-				-0.6
2,824,380	-				-0.5
2,824,380	-				+0.1
2,824,380	-				-2.4
2,824,380	-				-1.4
2,824,380	-				-0.1
2,824,380	-				-0.2
2,824,380	-				-0.2
2,824,381	+				-2.0
2,824,381	+				-0.3
2,824,381	+				-2.6
2,824,381	+				+0.2
2,824,381	+				-0.6
2,824,381	+				-0.2
2,824,381	+				+0.2
2,824,381	+				-0.5
2,824,381	+				+1.4
2,824,381	+				-0.6
2,824,381	+				+0.5
2,824,381	+				-1.0
2,824,381	+				+0.2
2,824,381	+				+0.2
2,824,382	-				+0.9
2,824,382	-				-0.8
2,824,382	-				+0.1
2,824,382	-				-0.9
2,824,382	-				+0.9
2,824,382	-				+0.3
2,824,382	-				-1.2
2,824,382	-				-1.6
2,824,382	-				-1.2
2,824,613	+				-0.2
2,824,613	+				+0.3
2,824,613	+				-1.3
2,824,613	+				+0.9
2,824,613	+				+0.3
2,824,613	+				-0.0
2,824,613	+				-0.1
2,824,613	+				-0.1
2,824,613	+				+1.2
2,824,613	+				-0.7
2,824,613	+				+1.3
2,824,613	+				-0.2
2,824,613	+				+0.4
2,824,613	+				-1.4
2,824,613	+				-1.3
2,824,614	-				+0.4
2,824,614	-				-0.6
2,824,614	-				+0.7
2,824,614	-				-0.9
2,824,614	-				-0.3
2,824,614	-				+0.7
2,824,614	-				-0.9
2,824,614	-				-1.5
2,824,614	-				-0.1
2,824,614	-				-0.6
2,824,614	-				+0.3
2,824,614	-				+1.7
2,824,614	-				-0.4
2,824,614	-				+0.3
2,824,614	-				-0.1
2,824,614	-				+0.6
2,824,675	-		MPMX19_02698	0.14	+1.1
2,824,675	-		MPMX19_02698	0.14	-2.3
2,824,727	+		MPMX19_02698	0.19	-1.8
2,824,727	+		MPMX19_02698	0.19	-1.4
2,824,727	+		MPMX19_02698	0.19	-0.8
2,824,727	+		MPMX19_02698	0.19	-0.7
2,824,728	-		MPMX19_02698	0.19	-0.8
2,824,728	-		MPMX19_02698	0.19	-0.4
2,824,887	+		MPMX19_02698	0.32	-2.6
2,824,887	+		MPMX19_02698	0.32	+1.7
2,824,887	+		MPMX19_02698	0.32	-0.7
2,824,887	+		MPMX19_02698	0.32	+0.7
2,824,887	+		MPMX19_02698	0.32	-1.8
2,824,887	+		MPMX19_02698	0.32	-0.5
2,824,887	+		MPMX19_02698	0.32	+0.1
2,824,887	+		MPMX19_02698	0.32	+0.8
2,824,887	+		MPMX19_02698	0.32	+1.9
2,824,887	+		MPMX19_02698	0.32	-0.6
2,824,887	+		MPMX19_02698	0.32	+0.4
2,824,887	+		MPMX19_02698	0.32	+0.6
2,824,887	+		MPMX19_02698	0.32	+0.4
2,824,888	-		MPMX19_02698	0.32	+1.2
2,824,888	-		MPMX19_02698	0.32	-0.3
2,824,888	-		MPMX19_02698	0.32	+0.3
2,824,888	-		MPMX19_02698	0.32	-0.9
2,824,888	-		MPMX19_02698	0.32	-0.3
2,824,888	-		MPMX19_02698	0.32	-2.4
2,824,888	-		MPMX19_02698	0.32	+0.7
2,824,888	-		MPMX19_02698	0.32	+1.2
2,824,888	-		MPMX19_02698	0.32	-0.9
2,824,951	+		MPMX19_02698	0.38	-1.5
2,824,951	+		MPMX19_02698	0.38	-1.9
2,824,951	+		MPMX19_02698	0.38	+0.7
2,824,952	-		MPMX19_02698	0.38	-0.3
2,824,952	-		MPMX19_02698	0.38	+0.2
2,824,952	-		MPMX19_02698	0.38	+0.0
2,825,173	+		MPMX19_02698	0.56	+1.2
2,825,173	+		MPMX19_02698	0.56	-0.8
2,825,174	-		MPMX19_02698	0.56	-1.1
2,825,537	+		MPMX19_02698	0.87	-0.7
2,825,537	+		MPMX19_02698	0.87	-0.9
2,825,537	+		MPMX19_02698	0.87	+1.4
2,825,537	+		MPMX19_02698	0.87	-0.2
2,825,538	-		MPMX19_02698	0.87	+0.7
2,825,538	-		MPMX19_02698	0.87	+0.1
2,825,538	-		MPMX19_02698	0.87	-0.6
2,825,538	-		MPMX19_02698	0.87	-0.6
2,825,538	-		MPMX19_02698	0.87	-0.0
2,825,884	+		MPMX19_02699	0.14	+0.0
2,825,884	+		MPMX19_02699	0.14	-0.1
2,825,884	+		MPMX19_02699	0.14	+1.4
2,825,884	+		MPMX19_02699	0.14	-1.1
2,825,884	+		MPMX19_02699	0.14	-0.2
2,825,884	+		MPMX19_02699	0.14	-0.9
2,825,884	+		MPMX19_02699	0.14	-1.1
2,825,884	+		MPMX19_02699	0.14	-1.0
2,825,884	+		MPMX19_02699	0.14	+0.6
2,825,884	+		MPMX19_02699	0.14	+1.1
2,825,885	-		MPMX19_02699	0.14	-0.9
2,825,885	-		MPMX19_02699	0.14	-0.8
2,825,885	-		MPMX19_02699	0.14	+0.4
2,825,885	-		MPMX19_02699	0.14	-0.7
2,825,885	-		MPMX19_02699	0.14	-2.6
2,826,011	+		MPMX19_02699	0.23	-1.5
2,826,011	+		MPMX19_02699	0.23	-1.3
2,826,011	+		MPMX19_02699	0.23	+1.1
2,826,011	+		MPMX19_02699	0.23	-1.6
2,826,011	+		MPMX19_02699	0.23	-1.8
2,826,011	+		MPMX19_02699	0.23	-1.5
2,826,011	+		MPMX19_02699	0.23	-1.1
2,826,012	-		MPMX19_02699	0.23	-2.1
2,826,012	-		MPMX19_02699	0.23	-0.3
2,826,012	-		MPMX19_02699	0.23	-0.9
2,826,012	-		MPMX19_02699	0.23	-0.1
2,826,012	-		MPMX19_02699	0.23	-0.8
2,826,012	-		MPMX19_02699	0.23	+0.5
2,826,012	-		MPMX19_02699	0.23	-0.4
2,826,012	-		MPMX19_02699	0.23	-0.1
2,826,012	-		MPMX19_02699	0.23	-1.9
2,826,012	-		MPMX19_02699	0.23	-0.5
2,826,012	-		MPMX19_02699	0.23	-0.5
2,826,012	-		MPMX19_02699	0.23	-0.3
2,826,012	-		MPMX19_02699	0.23	+0.1
2,826,012	-		MPMX19_02699	0.23	-0.1
2,826,012	-		MPMX19_02699	0.23	+0.2
2,826,012	-		MPMX19_02699	0.23	+0.2
2,826,012	-		MPMX19_02699	0.23	-1.5
2,826,012	-		MPMX19_02699	0.23	-1.7
2,826,012	-		MPMX19_02699	0.23	+1.4
2,826,012	-		MPMX19_02699	0.23	-0.8
2,826,012	-		MPMX19_02699	0.23	-0.6
2,826,062	+		MPMX19_02699	0.26	+1.7
2,826,063	-		MPMX19_02699	0.27	-0.6
2,826,063	-		MPMX19_02699	0.27	+0.7
2,826,215	+		MPMX19_02699	0.38	-0.1
2,826,215	+		MPMX19_02699	0.38	-0.9
2,826,215	+		MPMX19_02699	0.38	-1.3
2,826,216	-		MPMX19_02699	0.38	-1.0
2,826,216	-		MPMX19_02699	0.38	-0.3
2,826,229	+		MPMX19_02699	0.39	-0.2
2,826,229	+		MPMX19_02699	0.39	-0.6
2,826,229	+		MPMX19_02699	0.39	-0.4
2,826,229	+		MPMX19_02699	0.39	-0.3
2,826,579	+		MPMX19_02699	0.64	-0.4
2,826,579	+		MPMX19_02699	0.64	-0.9
2,826,579	+		MPMX19_02699	0.64	+0.3
2,826,579	+		MPMX19_02699	0.64	-1.1
2,826,580	-		MPMX19_02699	0.64	-0.2
2,826,580	-		MPMX19_02699	0.64	+0.3
2,826,580	-		MPMX19_02699	0.64	-0.9
2,826,580	-		MPMX19_02699	0.64	-0.8
2,826,587	+		MPMX19_02699	0.65	+1.2
2,826,587	+		MPMX19_02699	0.65	+0.1
2,826,587	+		MPMX19_02699	0.65	+0.3
2,826,588	-		MPMX19_02699	0.65	+0.1