Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02555

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02554 and MPMX19_02555 are separated by 381 nucleotidesMPMX19_02555 and MPMX19_02556 are separated by 68 nucleotides MPMX19_02554: MPMX19_02554 - Transcription termination factor Rho, at 2,669,812 to 2,671,068 _02554 MPMX19_02555: MPMX19_02555 - hypothetical protein, at 2,671,450 to 2,671,878 _02555 MPMX19_02556: MPMX19_02556 - Ferrochelatase, at 2,671,947 to 2,673,101 _02556 Position (kb) 2671 2672Strain fitness (log2 ratio) -1 0 1at 2671.901 kb on - strandat 2671.901 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
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2,671,901 - -0.3
2,671,901 - -0.1

Or see this region's nucleotide sequence