Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02356

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,478,625	+		MPMX19_02355	0.15	-0.4
2,478,625	+		MPMX19_02355	0.15	+0.1
2,478,672	+		MPMX19_02355	0.20	+0.0
2,478,672	+		MPMX19_02355	0.20	-0.3
2,478,672	+		MPMX19_02355	0.20	-0.2
2,478,711	+		MPMX19_02355	0.25	+0.1
2,478,711	+		MPMX19_02355	0.25	-0.7
2,478,711	+		MPMX19_02355	0.25	+0.8
2,478,810	+		MPMX19_02355	0.36	-2.2
2,478,810	+		MPMX19_02355	0.36	-0.9
2,478,810	+		MPMX19_02355	0.36	-0.9
2,478,810	+		MPMX19_02355	0.36	-0.3
2,478,810	+		MPMX19_02355	0.36	-0.3
2,478,810	+		MPMX19_02355	0.36	+0.2
2,478,934	+		MPMX19_02355	0.50	+0.4
2,478,934	+		MPMX19_02355	0.50	+1.4
2,478,941	+		MPMX19_02355	0.51	+0.4
2,478,941	+		MPMX19_02355	0.51	-0.6
2,478,952	+		MPMX19_02355	0.52	-1.5
2,478,952	+		MPMX19_02355	0.52	+0.3
2,478,952	+		MPMX19_02355	0.52	-0.2
2,478,952	+		MPMX19_02355	0.52	-2.1
2,478,952	+		MPMX19_02355	0.52	+0.7
2,478,952	+		MPMX19_02355	0.52	-0.0
2,478,952	+		MPMX19_02355	0.52	+0.3
2,478,952	+		MPMX19_02355	0.52	-0.2
2,478,952	+		MPMX19_02355	0.52	-0.1
2,478,952	+		MPMX19_02355	0.52	+0.9
2,478,952	+		MPMX19_02355	0.52	+0.1
2,478,952	+		MPMX19_02355	0.52	+1.3
2,478,952	+		MPMX19_02355	0.52	-0.0
2,478,952	+		MPMX19_02355	0.52	+0.7
2,478,952	+		MPMX19_02355	0.52	+0.7
2,478,952	+		MPMX19_02355	0.52	+1.4
2,478,952	+		MPMX19_02355	0.52	-1.2
2,478,952	+		MPMX19_02355	0.52	+0.4
2,478,952	+		MPMX19_02355	0.52	-0.1
2,478,954	+		MPMX19_02355	0.53	+0.3
2,479,010	+		MPMX19_02355	0.59	-0.9
2,479,010	+		MPMX19_02355	0.59	+0.1
2,479,092	+		MPMX19_02355	0.69	+0.3
2,479,210	+		MPMX19_02355	0.82	+0.7
2,479,210	+		MPMX19_02355	0.82	-0.7
2,479,210	+		MPMX19_02355	0.82	-0.0
2,479,251	+		MPMX19_02355	0.87	+0.9
2,479,251	+		MPMX19_02355	0.87	-0.7
2,479,251	+		MPMX19_02355	0.87	-0.3
2,479,251	+		MPMX19_02355	0.87	-1.0
2,479,251	+		MPMX19_02355	0.87	-1.9
2,479,251	+		MPMX19_02355	0.87	+0.1
2,479,251	+		MPMX19_02355	0.87	+0.0
2,479,251	+		MPMX19_02355	0.87	+0.3
2,479,251	+		MPMX19_02355	0.87	+0.7
2,479,271	+		MPMX19_02355	0.90	+0.9
2,479,271	+		MPMX19_02355	0.90	+0.7
2,479,520	+		MPMX19_02356	0.12	+0.1
2,479,520	+		MPMX19_02356	0.12	+0.3
2,479,520	+		MPMX19_02356	0.12	+0.1
2,479,520	+		MPMX19_02356	0.12	-0.9
2,479,520	+		MPMX19_02356	0.12	-0.9
2,479,520	+		MPMX19_02356	0.12	+0.4
2,479,520	+		MPMX19_02356	0.12	-0.2
2,479,520	+		MPMX19_02356	0.12	+0.2
2,479,520	+		MPMX19_02356	0.12	-1.5
2,479,520	+		MPMX19_02356	0.12	-0.1
2,479,520	+		MPMX19_02356	0.12	-0.6
2,479,520	+		MPMX19_02356	0.12	+0.8
2,479,520	+		MPMX19_02356	0.12	+0.7
2,479,521	-		MPMX19_02356	0.12	-0.7
2,479,521	-		MPMX19_02356	0.12	-1.9
2,479,571	+		MPMX19_02356	0.15	-1.6
2,479,571	+		MPMX19_02356	0.15	+0.2
2,479,571	+		MPMX19_02356	0.15	-0.4
2,479,571	+		MPMX19_02356	0.15	-3.1
2,479,571	+		MPMX19_02356	0.15	-0.3
2,479,571	+		MPMX19_02356	0.15	-1.7
2,479,572	-		MPMX19_02356	0.15	-0.5
2,479,572	-		MPMX19_02356	0.15	-0.1
2,479,572	-		MPMX19_02356	0.15	-0.7
2,479,572	-		MPMX19_02356	0.15	+0.8
2,479,572	-		MPMX19_02356	0.15	-0.8
2,479,572	-		MPMX19_02356	0.15	-1.1
2,479,572	-		MPMX19_02356	0.15	-0.3
2,479,574	+		MPMX19_02356	0.15	-0.8
2,479,574	+		MPMX19_02356	0.15	-0.3
2,479,574	+		MPMX19_02356	0.15	+2.1
2,479,574	+		MPMX19_02356	0.15	+1.0
2,479,574	+		MPMX19_02356	0.15	+0.7
2,479,574	+		MPMX19_02356	0.15	-0.8
2,479,574	+		MPMX19_02356	0.15	-0.4
2,479,574	+		MPMX19_02356	0.15	-0.7
2,479,575	-		MPMX19_02356	0.15	+2.0
2,479,575	-		MPMX19_02356	0.15	+1.4
2,479,575	-		MPMX19_02356	0.15	-0.8
2,479,575	-		MPMX19_02356	0.15	-0.1
2,479,575	-		MPMX19_02356	0.15	-0.3
2,479,575	-		MPMX19_02356	0.15	+0.1
2,479,575	-		MPMX19_02356	0.15	-1.0
2,479,589	-		MPMX19_02356	0.16	+0.4
2,479,589	-		MPMX19_02356	0.16	+1.0
2,479,591	+		MPMX19_02356	0.17	-0.8
2,479,591	+		MPMX19_02356	0.17	+0.7
2,479,591	+		MPMX19_02356	0.17	+0.2
2,479,591	+		MPMX19_02356	0.17	+0.9
2,479,591	+		MPMX19_02356	0.17	+0.1
2,479,592	-		MPMX19_02356	0.17	+0.7
2,479,592	-		MPMX19_02356	0.17	-1.5
2,479,811	+		MPMX19_02356	0.32	+0.0
2,479,811	+		MPMX19_02356	0.32	-1.7
2,479,942	+		MPMX19_02356	0.41	+0.8
2,479,942	+		MPMX19_02356	0.41	+0.5
2,479,942	+		MPMX19_02356	0.41	+0.6
2,479,942	+		MPMX19_02356	0.41	-0.5
2,479,942	+		MPMX19_02356	0.41	-1.1
2,479,942	+		MPMX19_02356	0.41	-1.2
2,479,943	-		MPMX19_02356	0.41	-0.3
2,479,943	-		MPMX19_02356	0.41	+0.7
2,479,943	-		MPMX19_02356	0.41	+1.3
2,480,167	+		MPMX19_02356	0.57	-1.3
2,480,167	+		MPMX19_02356	0.57	-0.5
2,480,167	+		MPMX19_02356	0.57	-0.9
2,480,167	+		MPMX19_02356	0.57	-0.1
2,480,167	+		MPMX19_02356	0.57	-1.2
2,480,167	+		MPMX19_02356	0.57	+1.1
2,480,167	+		MPMX19_02356	0.57	+0.3
2,480,167	+		MPMX19_02356	0.57	-0.7
2,480,167	+		MPMX19_02356	0.57	-0.3
2,480,168	-		MPMX19_02356	0.57	-0.6
2,480,387	+		MPMX19_02356	0.73	+0.2
2,480,387	+		MPMX19_02356	0.73	-0.7
2,480,387	+		MPMX19_02356	0.73	-0.2
2,480,388	-		MPMX19_02356	0.73	-0.0
2,480,462	+		MPMX19_02356	0.78	-1.8
2,480,462	+		MPMX19_02356	0.78	+0.4
2,480,462	+		MPMX19_02356	0.78	-0.3
2,480,513	+		MPMX19_02356	0.82	-0.7
2,480,514	-		MPMX19_02356	0.82	-0.7
2,480,514	-		MPMX19_02356	0.82	-0.9
2,480,514	-		MPMX19_02356	0.82	+0.3
2,480,514	-		MPMX19_02356	0.82	+0.3
2,480,716	+				-0.7
2,480,716	+				-1.3
2,480,716	+				+1.0
2,480,717	-				+1.3
2,480,739	+				+0.3
2,480,739	+				-0.1
2,480,739	+				-0.6
2,480,739	+				-0.0
2,480,740	-				-0.5
2,480,740	-				+0.0
2,480,740	-				+0.7
2,480,740	-				-0.4
2,481,020	+				-0.7
2,481,020	+				-1.8
2,481,020	+				-1.1
2,481,020	+				-0.9
2,481,020	+				-0.7
2,481,075	+				-0.5
2,481,075	+				-1.0
2,481,075	+				-1.5
2,481,075	+				-1.1
2,481,075	+				+0.7
2,481,075	+				-0.2
2,481,075	+				+0.3
2,481,076	-				+1.1
2,481,125	-				+0.9
2,481,125	-				-0.0
2,481,125	-				-2.1
2,481,125	-				-0.7
2,481,166	+				-1.8
2,481,166	+				+0.7
2,481,166	+				-1.5
2,481,166	+				-0.0
2,481,166	+				-0.1
2,481,166	+				+1.3
2,481,166	+				+0.3
2,481,166	+				+0.8
2,481,166	+				-1.3
2,481,166	+				-1.7
2,481,166	+				-1.5
2,481,166	+				-1.8
2,481,166	+				+0.2
2,481,166	+				+0.7
2,481,166	+				-0.3
2,481,166	+				-1.1
2,481,167	-				-1.1
2,481,190	+		MPMX19_02358	0.20	-0.0
2,481,190	+		MPMX19_02358	0.20	-0.3
2,481,190	+		MPMX19_02358	0.20	+0.7
2,481,190	+		MPMX19_02358	0.20	-1.1
2,481,190	+		MPMX19_02358	0.20	-0.5
2,481,190	+		MPMX19_02358	0.20	-2.1
2,481,190	+		MPMX19_02358	0.20	-1.5
2,481,190	+		MPMX19_02358	0.20	-0.2
2,481,190	+		MPMX19_02358	0.20	-0.0
2,481,190	+		MPMX19_02358	0.20	+2.0
2,481,190	+		MPMX19_02358	0.20	-0.1
2,481,190	+		MPMX19_02358	0.20	+0.3
2,481,191	-		MPMX19_02358	0.20	+0.8
2,481,191	-		MPMX19_02358	0.20	+0.1
2,481,191	-		MPMX19_02358	0.20	+1.3
2,481,191	-		MPMX19_02358	0.20	-0.3
2,481,191	-		MPMX19_02358	0.20	+0.1
2,481,269	+		MPMX19_02358	0.59	-1.1
2,481,269	+		MPMX19_02358	0.59	-0.0
2,481,269	+		MPMX19_02358	0.59	-1.1
2,481,269	+		MPMX19_02358	0.59	+0.5
2,481,269	+		MPMX19_02358	0.59	+0.2
2,481,269	+		MPMX19_02358	0.59	+0.4
2,481,269	+		MPMX19_02358	0.59	+0.9
2,481,269	+		MPMX19_02358	0.59	-1.5
2,481,269	+		MPMX19_02358	0.59	-1.3
2,481,269	+		MPMX19_02358	0.59	-0.9
2,481,270	-		MPMX19_02358	0.60	-0.6
2,481,270	-		MPMX19_02358	0.60	-0.1
2,481,270	-		MPMX19_02358	0.60	+0.7
2,481,270	-		MPMX19_02358	0.60	-0.1
2,481,270	-		MPMX19_02358	0.60	+0.3
2,481,270	-		MPMX19_02358	0.60	+0.7
2,481,270	-		MPMX19_02358	0.60	+0.5
2,481,270	-		MPMX19_02358	0.60	-0.0
2,481,270	-		MPMX19_02358	0.60	-0.5
2,481,270	-		MPMX19_02358	0.60	+0.3
2,481,270	-		MPMX19_02358	0.60	-1.3
2,481,271	+		MPMX19_02358	0.60	+0.5
2,481,271	+		MPMX19_02358	0.60	-0.1
2,481,271	+		MPMX19_02358	0.60	-0.6
2,481,271	+		MPMX19_02358	0.60	-2.3
2,481,271	+		MPMX19_02358	0.60	-0.7
2,481,271	+		MPMX19_02358	0.60	+0.2
2,481,271	+		MPMX19_02358	0.60	+0.7
2,481,271	+		MPMX19_02358	0.60	-0.8
2,481,271	+		MPMX19_02358	0.60	+0.1
2,481,271	+		MPMX19_02358	0.60	-1.5
2,481,271	+		MPMX19_02358	0.60	-0.8
2,481,271	+		MPMX19_02358	0.60	+0.5
2,481,271	+		MPMX19_02358	0.60	-1.9
2,481,271	+		MPMX19_02358	0.60	-0.5
2,481,272	-		MPMX19_02358	0.61	+1.7
2,481,272	-		MPMX19_02358	0.61	-0.6
2,481,272	-		MPMX19_02358	0.61	-0.0
2,481,272	-		MPMX19_02358	0.61	+0.8
2,481,272	-		MPMX19_02358	0.61	-0.2
2,481,272	-		MPMX19_02358	0.61	+0.3
2,481,272	-		MPMX19_02358	0.61	+1.1
2,481,272	-		MPMX19_02358	0.61	+1.3
2,481,438	+				-1.2
2,481,438	+				+0.6
2,481,439	-				-0.1
2,481,439	-				+0.3
2,481,439	-				-0.3
2,481,451	+				-0.3
2,481,452	-				-1.3
2,481,452	-				+1.1
2,481,463	-				+0.1
2,481,463	-				+0.9
2,481,463	-				+0.7
2,481,463	-				-1.0
2,481,659	+		MPMX19_02359	0.14	-0.9
2,481,659	+		MPMX19_02359	0.14	-0.7
2,481,659	+		MPMX19_02359	0.14	-1.1
2,481,659	+		MPMX19_02359	0.14	+0.9
2,481,659	+		MPMX19_02359	0.14	+1.0
2,481,659	+		MPMX19_02359	0.14	+0.4
2,481,659	+		MPMX19_02359	0.14	-0.2
2,481,659	+		MPMX19_02359	0.14	+3.0
2,481,659	+		MPMX19_02359	0.14	-0.3
2,481,659	+		MPMX19_02359	0.14	-0.4
2,481,660	-		MPMX19_02359	0.14	+0.3
2,481,660	-		MPMX19_02359	0.14	+0.4
2,481,660	-		MPMX19_02359	0.14	-1.5
2,481,660	-		MPMX19_02359	0.14	+0.7
2,481,660	-		MPMX19_02359	0.14	-1.7
2,481,660	-		MPMX19_02359	0.14	-0.9
2,481,660	-		MPMX19_02359	0.14	-0.3
2,481,660	-		MPMX19_02359	0.14	-1.8
2,481,660	-		MPMX19_02359	0.14	+0.3
2,481,660	-		MPMX19_02359	0.14	-0.8
2,481,660	-		MPMX19_02359	0.14	+0.1
2,481,674	-		MPMX19_02359	0.15	-0.9
2,481,674	-		MPMX19_02359	0.15	-0.7