Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02153

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,249,281	+		MPMX19_02152	0.26	-1.4
2,249,281	+		MPMX19_02152	0.26	-0.8
2,249,281	+		MPMX19_02152	0.26	-0.2
2,249,281	+		MPMX19_02152	0.26	-0.1
2,249,281	+		MPMX19_02152	0.26	-0.8
2,249,282	-		MPMX19_02152	0.27	-0.6
2,249,282	-		MPMX19_02152	0.27	+1.2
2,249,282	-		MPMX19_02152	0.27	+1.0
2,249,282	-		MPMX19_02152	0.27	-0.4
2,249,282	-		MPMX19_02152	0.27	+1.0
2,249,282	-		MPMX19_02152	0.27	-0.6
2,249,282	-		MPMX19_02152	0.27	+0.4
2,249,282	-		MPMX19_02152	0.27	+0.8
2,249,282	-		MPMX19_02152	0.27	-0.5
2,249,282	-		MPMX19_02152	0.27	-1.7
2,249,282	-		MPMX19_02152	0.27	+1.6
2,249,282	-		MPMX19_02152	0.27	+0.4
2,249,282	-		MPMX19_02152	0.27	-1.1
2,249,282	-		MPMX19_02152	0.27	-1.1
2,249,282	-		MPMX19_02152	0.27	-0.4
2,249,282	-		MPMX19_02152	0.27	+1.6
2,249,282	-		MPMX19_02152	0.27	-1.4
2,249,365	+		MPMX19_02152	0.34	-0.3
2,249,365	+		MPMX19_02152	0.34	-1.0
2,249,365	+		MPMX19_02152	0.34	-1.2
2,249,365	+		MPMX19_02152	0.34	+0.2
2,249,365	+		MPMX19_02152	0.34	-1.0
2,249,365	+		MPMX19_02152	0.34	-1.0
2,249,365	+		MPMX19_02152	0.34	+0.2
2,249,365	+		MPMX19_02152	0.34	+0.8
2,249,365	+		MPMX19_02152	0.34	-0.8
2,249,365	+		MPMX19_02152	0.34	+0.4
2,249,365	+		MPMX19_02152	0.34	-0.9
2,249,365	+		MPMX19_02152	0.34	-0.8
2,249,365	+		MPMX19_02152	0.34	-0.6
2,249,365	+		MPMX19_02152	0.34	-0.3
2,249,366	-		MPMX19_02152	0.34	+0.2
2,249,366	-		MPMX19_02152	0.34	-0.8
2,249,366	-		MPMX19_02152	0.34	-0.4
2,249,366	-		MPMX19_02152	0.34	-0.8
2,249,366	-		MPMX19_02152	0.34	-0.5
2,249,366	-		MPMX19_02152	0.34	-1.3
2,249,366	-		MPMX19_02152	0.34	-0.3
2,249,366	-		MPMX19_02152	0.34	-0.4
2,249,366	-		MPMX19_02152	0.34	-0.6
2,249,366	-		MPMX19_02152	0.34	+0.6
2,249,366	-		MPMX19_02152	0.34	-0.7
2,249,366	-		MPMX19_02152	0.34	-0.8
2,249,548	+		MPMX19_02152	0.51	+0.6
2,249,548	+		MPMX19_02152	0.51	+0.3
2,249,548	+		MPMX19_02152	0.51	-0.2
2,249,548	+		MPMX19_02152	0.51	-1.2
2,249,549	-		MPMX19_02152	0.51	-2.0
2,249,549	-		MPMX19_02152	0.51	-0.5
2,249,549	-		MPMX19_02152	0.51	+0.3
2,249,549	-		MPMX19_02152	0.51	-0.9
2,249,549	-		MPMX19_02152	0.51	-0.2
2,249,563	+		MPMX19_02152	0.52	-1.4
2,249,564	-		MPMX19_02152	0.52	+0.7
2,249,659	+		MPMX19_02152	0.61	-0.0
2,249,659	+		MPMX19_02152	0.61	-1.1
2,249,660	-		MPMX19_02152	0.61	-0.4
2,249,660	-		MPMX19_02152	0.61	-1.4
2,249,677	+		MPMX19_02152	0.63	-1.2
2,249,677	+		MPMX19_02152	0.63	+0.0
2,249,677	+		MPMX19_02152	0.63	+1.3
2,249,677	+		MPMX19_02152	0.63	-0.4
2,249,678	-		MPMX19_02152	0.63	-0.2
2,249,842	+		MPMX19_02152	0.78	-0.7
2,249,842	+		MPMX19_02152	0.78	+1.1
2,249,842	+		MPMX19_02152	0.78	+0.2
2,249,842	+		MPMX19_02152	0.78	-0.1
2,249,842	+		MPMX19_02152	0.78	-0.3
2,249,843	-		MPMX19_02152	0.78	-1.1
2,249,888	+		MPMX19_02152	0.82	-1.4
2,249,888	+		MPMX19_02152	0.82	-0.5
2,249,889	-		MPMX19_02152	0.82	+0.2
2,249,889	-		MPMX19_02152	0.82	-1.2
2,249,889	-		MPMX19_02152	0.82	-0.8
2,249,889	-		MPMX19_02152	0.82	-0.7
2,249,889	-		MPMX19_02152	0.82	-1.2
2,249,889	-		MPMX19_02152	0.82	-2.1
2,249,889	-		MPMX19_02152	0.82	+1.0
2,250,077	+				+0.8
2,250,077	+				-2.2
2,250,077	+				-0.8
2,250,077	+				-0.1
2,250,077	+				+0.4
2,250,078	-				-0.7
2,250,127	+				+0.9
2,250,127	+				-0.7
2,250,127	+				+0.0
2,250,127	+				+0.0
2,250,127	+				+1.3
2,250,127	+				+0.0
2,250,127	+				-1.1
2,250,127	+				+0.0
2,250,127	+				+1.2
2,250,127	+				-0.2
2,250,127	+				+0.0
2,250,127	+				+0.7
2,250,127	+				-0.5
2,250,127	+				+0.2
2,250,127	+				+1.0
2,250,127	+				-0.1
2,250,127	+				-0.1
2,250,127	+				+0.6
2,250,127	+				-0.7
2,250,127	+				+0.0
2,250,127	+				+1.2
2,250,127	+				+1.9
2,250,127	+				+0.8
2,250,127	+				+0.2
2,250,127	+				-1.6
2,250,127	+				-0.7
2,250,127	+				+1.0
2,250,128	-				-1.0
2,250,128	-				+0.1
2,250,128	-				-1.3
2,250,128	-				-2.2
2,250,128	-				-0.7
2,250,128	-				-2.9
2,250,128	-				+0.6
2,250,128	-				-2.1
2,250,128	-				+0.9
2,250,128	-				+0.8
2,250,128	-				-0.1
2,250,128	-				-1.2
2,250,128	-				-1.6
2,250,128	-				+1.2
2,250,128	-				-0.5
2,250,128	-				-0.2
2,250,128	-				-0.2
2,250,128	-				+1.0
2,250,128	-				-1.6
2,250,169	+				+0.9
2,250,170	-				+0.3
2,250,197	-				-0.7
2,250,202	+				+1.3
2,250,202	+				-0.7
2,250,202	+				+0.5
2,250,202	+				-0.3
2,250,203	-				-0.3
2,250,203	-				+0.3
2,250,203	-				+0.9
2,250,203	-				-0.7
2,250,235	+				-0.7
2,250,235	+				-0.7
2,250,235	+				+0.0
2,250,235	+				-1.0
2,250,235	+				-0.1
2,250,235	+				+1.0
2,250,235	+				-0.5
2,250,235	+				-0.8
2,250,235	+				-1.2
2,250,236	-				-0.9
2,250,236	-				-0.4
2,250,236	-				+0.2
2,250,236	-				-1.3
2,250,236	-				-0.8
2,250,236	-				-2.6
2,250,236	-				-0.5
2,250,236	-				-0.2
2,250,236	-				+0.7
2,250,236	-				-0.0
2,250,236	-				-0.3
2,250,236	-				-0.6
2,250,236	-				+1.8
2,250,236	-				-0.4
2,250,236	-				-0.4
2,250,236	-				-0.7
2,250,236	-				-0.4
2,250,300	+				-1.0
2,250,300	+				+0.4
2,250,301	-				-1.1
2,250,301	-				-1.7
2,250,301	-				+1.4
2,250,478	+		MPMX19_02153	0.24	-0.4
2,250,478	+		MPMX19_02153	0.24	+0.5
2,250,478	+		MPMX19_02153	0.24	-0.4
2,250,479	-		MPMX19_02153	0.24	-0.8
2,250,479	-		MPMX19_02153	0.24	+1.0
2,250,479	-		MPMX19_02153	0.24	-0.1
2,250,479	-		MPMX19_02153	0.24	-0.4
2,250,479	-		MPMX19_02153	0.24	-1.1
2,250,494	-		MPMX19_02153	0.26	-0.8
2,250,787	+		MPMX19_02153	0.60	-1.0
2,250,787	+		MPMX19_02153	0.60	-0.2
2,250,788	-		MPMX19_02153	0.60	-1.3
2,250,788	-		MPMX19_02153	0.60	-1.3
2,251,335	-		MPMX19_02154	0.19	+0.5
2,251,335	-		MPMX19_02154	0.19	-0.7
2,251,394	+		MPMX19_02154	0.25	+0.9
2,251,394	+		MPMX19_02154	0.25	-0.5
2,251,394	+		MPMX19_02154	0.25	+0.3
2,251,394	+		MPMX19_02154	0.25	+0.4
2,251,394	+		MPMX19_02154	0.25	-1.0
2,251,394	+		MPMX19_02154	0.25	+0.1
2,251,394	+		MPMX19_02154	0.25	-0.6
2,251,394	+		MPMX19_02154	0.25	+2.4
2,251,394	+		MPMX19_02154	0.25	-1.0
2,251,395	-		MPMX19_02154	0.26	+0.1
2,251,395	-		MPMX19_02154	0.26	+1.1
2,251,395	-		MPMX19_02154	0.26	-2.0
2,251,395	-		MPMX19_02154	0.26	-1.0
2,251,395	-		MPMX19_02154	0.26	-0.2
2,251,395	-		MPMX19_02154	0.26	-1.0
2,251,395	-		MPMX19_02154	0.26	-0.3
2,251,395	-		MPMX19_02154	0.26	+1.1
2,251,395	-		MPMX19_02154	0.26	+1.2
2,251,400	+		MPMX19_02154	0.26	+0.4
2,251,400	+		MPMX19_02154	0.26	-0.4
2,251,400	+		MPMX19_02154	0.26	-2.9
2,251,400	+		MPMX19_02154	0.26	-0.6
2,251,400	+		MPMX19_02154	0.26	-0.4
2,251,400	+		MPMX19_02154	0.26	+0.9
2,251,400	+		MPMX19_02154	0.26	-0.4
2,251,400	+		MPMX19_02154	0.26	-0.4
2,251,400	+		MPMX19_02154	0.26	+1.7
2,251,400	+		MPMX19_02154	0.26	-0.5
2,251,400	+		MPMX19_02154	0.26	-2.6
2,251,401	-		MPMX19_02154	0.26	-2.5
2,251,401	-		MPMX19_02154	0.26	+0.3
2,251,401	-		MPMX19_02154	0.26	+0.6
2,251,401	-		MPMX19_02154	0.26	-1.4
2,251,401	-		MPMX19_02154	0.26	-1.4
2,251,401	-		MPMX19_02154	0.26	-0.0
2,251,401	-		MPMX19_02154	0.26	-0.4
2,251,401	-		MPMX19_02154	0.26	-1.4
2,251,401	-		MPMX19_02154	0.26	-0.4
2,251,409	+		MPMX19_02154	0.27	-1.8
2,251,409	+		MPMX19_02154	0.27	+0.2
2,251,409	+		MPMX19_02154	0.27	+1.5
2,251,409	+		MPMX19_02154	0.27	+0.0
2,251,409	+		MPMX19_02154	0.27	-0.4
2,251,409	+		MPMX19_02154	0.27	-1.7
2,251,409	+		MPMX19_02154	0.27	+1.1
2,251,409	+		MPMX19_02154	0.27	-0.2
2,251,410	-		MPMX19_02154	0.27	-0.4
2,251,410	-		MPMX19_02154	0.27	-0.9
2,251,410	-		MPMX19_02154	0.27	-1.0
2,251,410	-		MPMX19_02154	0.27	-0.7
2,251,410	-		MPMX19_02154	0.27	-0.9
2,251,410	-		MPMX19_02154	0.27	-1.8
2,251,410	-		MPMX19_02154	0.27	-1.3
2,251,410	-		MPMX19_02154	0.27	-0.4
2,251,410	-		MPMX19_02154	0.27	-1.0
2,251,410	-		MPMX19_02154	0.27	-0.7
2,251,410	-		MPMX19_02154	0.27	-1.9
2,251,410	-		MPMX19_02154	0.27	-0.2
2,251,410	-		MPMX19_02154	0.27	-0.2
2,251,472	+		MPMX19_02154	0.34	-0.3
2,251,472	+		MPMX19_02154	0.34	-0.6
2,251,472	+		MPMX19_02154	0.34	-0.4
2,251,472	+		MPMX19_02154	0.34	+1.6
2,251,472	+		MPMX19_02154	0.34	-1.2
2,251,472	+		MPMX19_02154	0.34	+0.3
2,251,472	+		MPMX19_02154	0.34	+0.2
2,251,472	+		MPMX19_02154	0.34	+1.4
2,251,472	+		MPMX19_02154	0.34	+0.9
2,251,472	+		MPMX19_02154	0.34	-1.6
2,251,472	+		MPMX19_02154	0.34	+1.0
2,251,472	+		MPMX19_02154	0.34	+0.6
2,251,472	+		MPMX19_02154	0.34	-0.1
2,251,472	+		MPMX19_02154	0.34	-1.7
2,251,473	-		MPMX19_02154	0.34	-1.2
2,251,473	-		MPMX19_02154	0.34	-0.6
2,251,473	-		MPMX19_02154	0.34	-0.4
2,251,473	-		MPMX19_02154	0.34	-0.7
2,251,473	-		MPMX19_02154	0.34	-0.9
2,251,473	-		MPMX19_02154	0.34	-1.3
2,251,473	-		MPMX19_02154	0.34	+0.2
2,251,473	-		MPMX19_02154	0.34	-0.2
2,251,473	-		MPMX19_02154	0.34	-2.0
2,251,473	-		MPMX19_02154	0.34	-1.3
2,251,473	-		MPMX19_02154	0.34	-1.2
2,251,473	-		MPMX19_02154	0.34	+0.6
2,251,473	-		MPMX19_02154	0.34	-0.1
2,251,473	-		MPMX19_02154	0.34	-0.4
2,251,473	-		MPMX19_02154	0.34	-0.3
2,251,473	-		MPMX19_02154	0.34	-1.0
2,251,473	-		MPMX19_02154	0.34	-0.3
2,251,473	-		MPMX19_02154	0.34	+1.3
2,251,473	-		MPMX19_02154	0.34	+0.2
2,251,473	-		MPMX19_02154	0.34	+0.9
2,251,473	-		MPMX19_02154	0.34	+0.6
2,251,473	-		MPMX19_02154	0.34	-0.2
2,251,473	-		MPMX19_02154	0.34	+0.3
2,251,473	-		MPMX19_02154	0.34	+0.2
2,251,473	-		MPMX19_02154	0.34	+0.2
2,251,473	-		MPMX19_02154	0.34	-1.2
2,251,934	+		MPMX19_02154	0.86	-0.8
2,251,934	+		MPMX19_02154	0.86	-0.1
2,251,935	-		MPMX19_02154	0.86	+0.2
2,251,943	+		MPMX19_02154	0.87	-0.3
2,251,943	+		MPMX19_02154	0.87	-0.4
2,251,943	+		MPMX19_02154	0.87	+0.4
2,251,943	+		MPMX19_02154	0.87	-0.2
2,251,943	+		MPMX19_02154	0.87	+0.6
2,251,943	+		MPMX19_02154	0.87	+0.8
2,251,943	+		MPMX19_02154	0.87	-2.0
2,251,943	+		MPMX19_02154	0.87	-0.7
2,251,943	+		MPMX19_02154	0.87	-0.8
2,251,943	+		MPMX19_02154	0.87	-0.3
2,251,943	+		MPMX19_02154	0.87	-0.1
2,251,943	+		MPMX19_02154	0.87	+0.0
2,251,943	+		MPMX19_02154	0.87	-0.6
2,251,943	+		MPMX19_02154	0.87	-0.3
2,251,943	+		MPMX19_02154	0.87	-0.7
2,251,943	+		MPMX19_02154	0.87	+0.5
2,251,943	+		MPMX19_02154	0.87	-2.5
2,251,943	+		MPMX19_02154	0.87	-0.2
2,251,943	+		MPMX19_02154	0.87	-0.3
2,251,943	+		MPMX19_02154	0.87	+0.0
2,251,943	+		MPMX19_02154	0.87	+0.8
2,251,943	+		MPMX19_02154	0.87	-1.5
2,251,943	+		MPMX19_02154	0.87	-0.3
2,251,944	-		MPMX19_02154	0.87	-0.5
2,251,944	-		MPMX19_02154	0.87	-1.1
2,251,944	-		MPMX19_02154	0.87	-0.2
2,251,944	-		MPMX19_02154	0.87	-2.0
2,251,944	-		MPMX19_02154	0.87	+0.2
2,251,944	-		MPMX19_02154	0.87	-1.4
2,251,944	-		MPMX19_02154	0.87	-1.0
2,251,944	-		MPMX19_02154	0.87	-1.5
2,251,944	-		MPMX19_02154	0.87	+0.0
2,251,944	-		MPMX19_02154	0.87	+0.5
2,251,944	-		MPMX19_02154	0.87	+0.6
2,251,944	-		MPMX19_02154	0.87	+0.0
2,251,944	-		MPMX19_02154	0.87	-0.4
2,251,944	-		MPMX19_02154	0.87	+0.2
2,251,944	-		MPMX19_02154	0.87	-0.8
2,251,944	-		MPMX19_02154	0.87	+0.6
2,251,944	-		MPMX19_02154	0.87	-0.1
2,251,944	-		MPMX19_02154	0.87	-0.7
2,251,946	+		MPMX19_02154	0.88	+0.4
2,251,946	+		MPMX19_02154	0.88	-0.6
2,251,946	+		MPMX19_02154	0.88	+0.5
2,251,947	-		MPMX19_02154	0.88	+0.6
2,251,947	-		MPMX19_02154	0.88	+1.2
2,251,947	-		MPMX19_02154	0.88	-1.7
2,251,947	-		MPMX19_02154	0.88	+0.5
2,251,947	-		MPMX19_02154	0.88	+1.3
2,251,947	-		MPMX19_02154	0.88	+0.1
2,251,985	+				-0.3
2,251,985	+				+0.3
2,251,985	+				-2.0
2,251,985	+				-2.5
2,251,985	+				-0.9
2,251,986	-				-0.8
2,251,986	-				+0.6
2,251,986	-				+0.8
2,251,986	-				-0.4
2,251,986	-				-1.3
2,252,090	-				+0.0
2,252,090	-				-0.2