Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02043

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,134,434	-		MPMX19_02041	0.72	+0.7
2,134,434	-		MPMX19_02041	0.72	+1.4
2,134,449	+		MPMX19_02041	0.78	-0.8
2,134,450	-		MPMX19_02041	0.78	+1.1
2,134,547	+				+0.2
2,134,547	+				+0.6
2,134,548	-				+1.3
2,134,548	-				+0.8
2,134,548	-				+0.2
2,134,706	+				-0.3
2,134,706	+				-1.9
2,134,706	+				-0.4
2,134,707	-				-0.1
2,134,707	-				+0.0
2,134,934	+		MPMX19_02042	0.45	+1.1
2,134,934	+		MPMX19_02042	0.45	+1.6
2,134,934	+		MPMX19_02042	0.45	+0.6
2,134,934	+		MPMX19_02042	0.45	-0.0
2,134,934	+		MPMX19_02042	0.45	+1.1
2,134,935	-		MPMX19_02042	0.45	-0.2
2,134,935	-		MPMX19_02042	0.45	-0.6
2,134,935	-		MPMX19_02042	0.45	+1.4
2,134,961	+		MPMX19_02042	0.49	+1.0
2,134,961	+		MPMX19_02042	0.49	+0.2
2,134,961	+		MPMX19_02042	0.49	-0.6
2,134,961	+		MPMX19_02042	0.49	+0.1
2,134,961	+		MPMX19_02042	0.49	-1.1
2,134,961	+		MPMX19_02042	0.49	-1.3
2,134,961	+		MPMX19_02042	0.49	-0.3
2,134,961	+		MPMX19_02042	0.49	-1.0
2,134,961	+		MPMX19_02042	0.49	-0.4
2,134,962	-		MPMX19_02042	0.49	-1.6
2,134,962	-		MPMX19_02042	0.49	+0.2
2,134,962	-		MPMX19_02042	0.49	-0.8
2,134,962	-		MPMX19_02042	0.49	-0.0
2,134,962	-		MPMX19_02042	0.49	-0.4
2,134,962	-		MPMX19_02042	0.49	-1.0
2,134,962	-		MPMX19_02042	0.49	+0.1
2,134,974	+		MPMX19_02042	0.51	-1.8
2,134,974	+		MPMX19_02042	0.51	-0.4
2,134,974	+		MPMX19_02042	0.51	-0.0
2,134,974	+		MPMX19_02042	0.51	+0.3
2,134,974	+		MPMX19_02042	0.51	+0.2
2,134,975	-		MPMX19_02042	0.51	-0.6
2,135,513	+		MPMX19_02043	0.32	-0.4
2,135,689	+		MPMX19_02043	0.61	+0.2
2,135,689	+		MPMX19_02043	0.61	+2.8
2,135,689	+		MPMX19_02043	0.61	+0.1
2,135,689	+		MPMX19_02043	0.61	+0.5
2,135,689	+		MPMX19_02043	0.61	-0.4
2,135,689	+		MPMX19_02043	0.61	-0.8
2,135,689	+		MPMX19_02043	0.61	-0.2
2,135,689	+		MPMX19_02043	0.61	-0.3
2,135,689	+		MPMX19_02043	0.61	+1.6
2,135,689	+		MPMX19_02043	0.61	-1.0
2,135,689	+		MPMX19_02043	0.61	-0.2
2,135,690	-		MPMX19_02043	0.62	-0.6
2,135,690	-		MPMX19_02043	0.62	-0.4
2,135,690	-		MPMX19_02043	0.62	+0.7
2,135,690	-		MPMX19_02043	0.62	+1.1
2,135,690	-		MPMX19_02043	0.62	-0.9
2,135,690	-		MPMX19_02043	0.62	-1.4
2,135,690	-		MPMX19_02043	0.62	-1.6
2,135,690	-		MPMX19_02043	0.62	-2.6
2,135,690	-		MPMX19_02043	0.62	-0.8
2,135,710	+		MPMX19_02043	0.65	+0.9
2,135,711	-		MPMX19_02043	0.65	-0.8
2,135,791	+		MPMX19_02043	0.78	-0.4
2,135,791	+		MPMX19_02043	0.78	+0.2
2,135,791	+		MPMX19_02043	0.78	+1.6
2,135,791	+		MPMX19_02043	0.78	+0.8
2,135,791	+		MPMX19_02043	0.78	-1.3
2,135,791	+		MPMX19_02043	0.78	+1.0
2,135,791	+		MPMX19_02043	0.78	-0.2
2,135,791	+		MPMX19_02043	0.78	-0.4
2,135,791	+		MPMX19_02043	0.78	+0.1
2,135,792	-		MPMX19_02043	0.78	+1.7
2,135,792	-		MPMX19_02043	0.78	+1.3
2,135,792	-		MPMX19_02043	0.78	+0.1
2,135,792	-		MPMX19_02043	0.78	+0.1
2,135,792	-		MPMX19_02043	0.78	+2.6
2,135,857	+		MPMX19_02043	0.89	+0.6
2,135,857	+		MPMX19_02043	0.89	+1.0
2,135,858	-		MPMX19_02043	0.89	+1.9
2,135,858	-		MPMX19_02043	0.89	+1.1
2,135,858	-		MPMX19_02043	0.89	+0.2
2,135,953	+				+1.3
2,135,953	+				-0.4
2,135,953	+				-0.9
2,135,953	+				-0.0
2,135,953	+				-1.0
2,135,953	+				-1.6
2,135,953	+				+0.4
2,135,953	+				+0.7
2,135,954	-				-0.4
2,135,954	-				-0.3
2,135,954	-				-0.7
2,135,955	+				-1.0
2,135,955	+				+0.4
2,135,955	+				-1.8
2,135,955	+				-0.3
2,135,955	+				+0.7
2,135,955	+				+0.1
2,135,955	+				-3.4
2,135,955	+				-1.6
2,135,955	+				-2.7
2,135,955	+				-0.1
2,135,955	+				-0.6
2,135,955	+				-0.7
2,135,955	+				+1.0
2,135,955	+				-1.3
2,135,955	+				+0.9
2,135,955	+				-1.0
2,135,955	+				+1.0
2,135,956	-				-1.3
2,135,956	-				+1.0
2,135,956	-				+1.6
2,135,956	-				+0.9
2,135,956	-				-1.2
2,135,956	-				+0.4
2,135,956	-				+0.2
2,135,956	-				-1.0
2,135,956	-				+1.2
2,136,057	-				-0.0
2,136,060	+				-0.3
2,136,061	-				-1.1
2,136,093	+				-1.4
2,136,093	+				-0.3
2,136,094	-				-0.8
2,136,094	-				-0.4
2,136,099	+				+0.2
2,136,125	+				-0.4
2,136,127	+				-0.8
2,136,222	+				+0.3
2,136,222	+				-1.4
2,136,222	+				-2.1
2,136,223	-				+0.6
2,136,223	-				-0.8
2,136,223	-				+0.7
2,136,265	+				+0.4
2,136,265	+				+0.3
2,136,265	+				+0.9
2,136,265	+				-0.7
2,136,265	+				+0.7
2,136,265	+				+0.7
2,136,265	+				+0.1
2,136,266	-				-0.2
2,136,266	-				-1.8
2,136,266	-				-0.4
2,136,266	-				-1.6
2,136,751	+		MPMX19_02044	0.54	+0.2
2,136,752	-		MPMX19_02044	0.55	+0.6
2,136,752	-		MPMX19_02044	0.55	-0.1
2,136,752	-		MPMX19_02044	0.55	-1.0
2,136,752	-		MPMX19_02044	0.55	-0.3
2,136,752	-		MPMX19_02044	0.55	-0.0
2,136,889	+		MPMX19_02044	0.68	+0.7
2,136,889	+		MPMX19_02044	0.68	-0.2
2,136,889	+		MPMX19_02044	0.68	+1.6
2,136,890	-		MPMX19_02044	0.68	+0.0
2,136,890	-		MPMX19_02044	0.68	-0.3
2,136,890	-		MPMX19_02044	0.68	+1.6
2,136,890	-		MPMX19_02044	0.68	-1.0
2,136,890	-		MPMX19_02044	0.68	-0.8
2,136,890	-		MPMX19_02044	0.68	-1.0
2,136,890	-		MPMX19_02044	0.68	-0.8
2,136,890	-		MPMX19_02044	0.68	+0.9
2,136,895	+		MPMX19_02044	0.68	-0.5
2,136,895	+		MPMX19_02044	0.68	+0.0
2,136,895	+		MPMX19_02044	0.68	-0.9
2,136,895	+		MPMX19_02044	0.68	-0.6
2,136,895	+		MPMX19_02044	0.68	-0.7
2,136,895	+		MPMX19_02044	0.68	+0.3
2,136,895	+		MPMX19_02044	0.68	-2.3
2,136,895	+		MPMX19_02044	0.68	-0.8
2,136,895	+		MPMX19_02044	0.68	+0.6
2,136,895	+		MPMX19_02044	0.68	-1.6
2,136,895	+		MPMX19_02044	0.68	-1.1
2,136,895	+		MPMX19_02044	0.68	+0.6
2,136,895	+		MPMX19_02044	0.68	+0.3
2,136,895	+		MPMX19_02044	0.68	+0.2
2,136,895	+		MPMX19_02044	0.68	-0.8
2,136,895	+		MPMX19_02044	0.68	-0.0
2,136,895	+		MPMX19_02044	0.68	+0.5
2,136,896	-		MPMX19_02044	0.68	+0.2
2,136,896	-		MPMX19_02044	0.68	-0.3
2,136,896	-		MPMX19_02044	0.68	+1.2
2,136,896	-		MPMX19_02044	0.68	-1.6
2,136,896	-		MPMX19_02044	0.68	-1.1
2,136,896	-		MPMX19_02044	0.68	-0.0
2,136,896	-		MPMX19_02044	0.68	-1.2
2,136,896	-		MPMX19_02044	0.68	-0.5
2,136,896	-		MPMX19_02044	0.68	+1.1
2,136,896	-		MPMX19_02044	0.68	-0.6
2,136,896	-		MPMX19_02044	0.68	-0.9
2,136,896	-		MPMX19_02044	0.68	+0.1
2,136,896	-		MPMX19_02044	0.68	+0.6
2,136,896	-		MPMX19_02044	0.68	-0.8
2,136,896	-		MPMX19_02044	0.68	-0.8
2,136,896	-		MPMX19_02044	0.68	-0.8
2,136,896	-		MPMX19_02044	0.68	-0.4
2,136,896	-		MPMX19_02044	0.68	+0.1
2,136,896	-		MPMX19_02044	0.68	-2.1