Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01035

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,073,860	+		MPMX19_01034	0.71	-0.9
1,073,860	+		MPMX19_01034	0.71	-0.1
1,073,860	+		MPMX19_01034	0.71	-0.8
1,073,861	-		MPMX19_01034	0.71	+0.7
1,073,861	-		MPMX19_01034	0.71	-0.1
1,074,022	+		MPMX19_01034	0.77	-1.7
1,074,022	+		MPMX19_01034	0.77	-0.8
1,074,022	+		MPMX19_01034	0.77	-0.1
1,074,022	+		MPMX19_01034	0.77	+0.0
1,074,023	-		MPMX19_01034	0.77	-0.9
1,074,023	-		MPMX19_01034	0.77	-0.4
1,074,023	-		MPMX19_01034	0.77	-0.9
1,074,023	-		MPMX19_01034	0.77	+1.2
1,074,023	-		MPMX19_01034	0.77	+0.6
1,074,202	+		MPMX19_01034	0.84	+0.0
1,074,202	+		MPMX19_01034	0.84	+0.9
1,074,202	+		MPMX19_01034	0.84	-0.2
1,074,202	+		MPMX19_01034	0.84	-1.6
1,074,202	+		MPMX19_01034	0.84	+0.4
1,074,202	+		MPMX19_01034	0.84	-1.1
1,074,203	-		MPMX19_01034	0.84	+0.6
1,074,203	-		MPMX19_01034	0.84	-0.3
1,074,203	-		MPMX19_01034	0.84	-0.6
1,074,203	-		MPMX19_01034	0.84	-0.4
1,074,203	-		MPMX19_01034	0.84	-1.1
1,074,203	-		MPMX19_01034	0.84	+0.7
1,074,477	+				+0.2
1,074,622	+				+0.3
1,074,622	+				-1.3
1,074,622	+				-0.6
1,074,623	-				+0.0
1,074,623	-				-1.0
1,074,623	-				+0.3
1,074,704	+				-0.9
1,074,704	+				+0.0
1,074,705	-				-1.7
1,074,705	-				-1.1
1,074,705	-				-0.0
1,074,705	-				+0.6
1,074,705	-				+0.4
1,074,755	+				-1.0
1,074,756	-				-0.3
1,074,756	-				-0.7
1,074,756	-				-0.6
1,074,778	-				-0.7
1,074,977	+		MPMX19_01035	0.14	-1.4
1,074,978	-		MPMX19_01035	0.14	+1.4
1,075,062	+		MPMX19_01035	0.22	+0.3
1,075,062	+		MPMX19_01035	0.22	-0.2
1,075,062	+		MPMX19_01035	0.22	+0.8
1,075,062	+		MPMX19_01035	0.22	+0.2
1,075,063	-		MPMX19_01035	0.22	+0.9
1,075,063	-		MPMX19_01035	0.22	+0.2
1,075,063	-		MPMX19_01035	0.22	-0.7
1,075,063	-		MPMX19_01035	0.22	-0.1
1,075,186	+		MPMX19_01035	0.33	+0.3
1,075,186	+		MPMX19_01035	0.33	-1.6
1,075,186	+		MPMX19_01035	0.33	-1.9
1,075,186	+		MPMX19_01035	0.33	-1.3
1,075,186	+		MPMX19_01035	0.33	+0.3
1,075,186	+		MPMX19_01035	0.33	-1.0
1,075,186	+		MPMX19_01035	0.33	+0.6
1,075,186	+		MPMX19_01035	0.33	-0.4
1,075,186	+		MPMX19_01035	0.33	+0.3
1,075,186	+		MPMX19_01035	0.33	+1.2
1,075,186	+		MPMX19_01035	0.33	-1.0
1,075,186	+		MPMX19_01035	0.33	-0.8
1,075,186	+		MPMX19_01035	0.33	+0.0
1,075,186	+		MPMX19_01035	0.33	+0.2
1,075,186	+		MPMX19_01035	0.33	-0.6
1,075,186	+		MPMX19_01035	0.33	+0.1
1,075,186	+		MPMX19_01035	0.33	-0.3
1,075,187	-		MPMX19_01035	0.33	-0.7
1,075,187	-		MPMX19_01035	0.33	-0.4
1,075,187	-		MPMX19_01035	0.33	-0.1
1,075,187	-		MPMX19_01035	0.33	-0.1
1,075,187	-		MPMX19_01035	0.33	-0.8
1,075,187	-		MPMX19_01035	0.33	+0.2
1,075,187	-		MPMX19_01035	0.33	+0.4
1,075,187	-		MPMX19_01035	0.33	+0.9
1,075,187	-		MPMX19_01035	0.33	-0.1
1,075,187	-		MPMX19_01035	0.33	-1.7
1,075,187	-		MPMX19_01035	0.33	+0.1
1,075,187	-		MPMX19_01035	0.33	-0.8
1,075,187	-		MPMX19_01035	0.33	-0.3
1,075,187	-		MPMX19_01035	0.33	+0.8
1,075,187	-		MPMX19_01035	0.33	+0.3
1,075,187	-		MPMX19_01035	0.33	+0.7
1,075,187	-		MPMX19_01035	0.33	-1.0
1,075,187	-		MPMX19_01035	0.33	-0.1
1,075,187	-		MPMX19_01035	0.33	+0.1
1,075,375	+		MPMX19_01035	0.50	-0.6
1,075,504	+		MPMX19_01035	0.62	-0.3
1,075,504	+		MPMX19_01035	0.62	-0.0
1,075,504	+		MPMX19_01035	0.62	+0.0
1,075,504	+		MPMX19_01035	0.62	+0.2
1,075,504	+		MPMX19_01035	0.62	-1.3
1,075,504	+		MPMX19_01035	0.62	+0.1
1,075,504	+		MPMX19_01035	0.62	+1.4
1,075,504	+		MPMX19_01035	0.62	-0.0
1,075,504	+		MPMX19_01035	0.62	+0.2
1,075,505	-		MPMX19_01035	0.62	-0.2
1,075,505	-		MPMX19_01035	0.62	+0.3
1,075,505	-		MPMX19_01035	0.62	-0.4
1,075,505	-		MPMX19_01035	0.62	-2.9
1,075,505	-		MPMX19_01035	0.62	+0.1
1,075,505	-		MPMX19_01035	0.62	+1.4
1,075,505	-		MPMX19_01035	0.62	+0.9
1,075,505	-		MPMX19_01035	0.62	-0.4
1,075,505	-		MPMX19_01035	0.62	+0.9
1,075,505	-		MPMX19_01035	0.62	+0.7
1,075,505	-		MPMX19_01035	0.62	-1.0
1,075,505	-		MPMX19_01035	0.62	-0.4
1,075,660	+		MPMX19_01035	0.76	+0.4
1,075,660	+		MPMX19_01035	0.76	-0.6
1,075,660	+		MPMX19_01035	0.76	+0.1
1,075,660	+		MPMX19_01035	0.76	-0.8
1,075,660	+		MPMX19_01035	0.76	+0.6
1,075,660	+		MPMX19_01035	0.76	-0.9
1,075,660	+		MPMX19_01035	0.76	-1.0
1,075,660	+		MPMX19_01035	0.76	+0.1
1,075,660	+		MPMX19_01035	0.76	-0.4
1,075,660	+		MPMX19_01035	0.76	+0.3
1,075,661	-		MPMX19_01035	0.76	-0.0
1,075,661	-		MPMX19_01035	0.76	+0.5
1,075,661	-		MPMX19_01035	0.76	-2.1
1,075,661	-		MPMX19_01035	0.76	+1.4
1,075,661	-		MPMX19_01035	0.76	+0.0
1,075,661	-		MPMX19_01035	0.76	-0.6
1,075,661	-		MPMX19_01035	0.76	+0.5
1,075,669	+		MPMX19_01035	0.77	-0.2
1,075,670	-		MPMX19_01035	0.77	-0.2
1,075,670	-		MPMX19_01035	0.77	-0.6
1,075,670	-		MPMX19_01035	0.77	-1.1
1,075,670	-		MPMX19_01035	0.77	-2.0
1,075,670	-		MPMX19_01035	0.77	-1.7
1,075,714	+		MPMX19_01035	0.81	-1.6
1,075,714	+		MPMX19_01035	0.81	-1.3
1,075,714	+		MPMX19_01035	0.81	-0.2
1,075,732	+		MPMX19_01035	0.83	+1.8
1,075,732	+		MPMX19_01035	0.83	-0.8
1,075,732	+		MPMX19_01035	0.83	-0.0
1,075,732	+		MPMX19_01035	0.83	-1.2
1,075,733	-		MPMX19_01035	0.83	+0.4
1,075,733	-		MPMX19_01035	0.83	-1.0
1,075,733	-		MPMX19_01035	0.83	+1.4
1,075,733	-		MPMX19_01035	0.83	+1.7
1,075,733	-		MPMX19_01035	0.83	-0.4
1,075,733	-		MPMX19_01035	0.83	+1.9
1,075,733	-		MPMX19_01035	0.83	-0.5
1,075,733	-		MPMX19_01035	0.83	-0.0
1,076,021	+		MPMX19_01036	0.27	-1.6
1,076,021	+		MPMX19_01036	0.27	+0.2
1,076,021	+		MPMX19_01036	0.27	-0.5
1,076,021	+		MPMX19_01036	0.27	+1.2
1,076,021	+		MPMX19_01036	0.27	+0.2
1,076,021	+		MPMX19_01036	0.27	-1.5
1,076,021	+		MPMX19_01036	0.27	-0.4
1,076,021	+		MPMX19_01036	0.27	-1.0
1,076,021	+		MPMX19_01036	0.27	-0.6
1,076,021	+		MPMX19_01036	0.27	+0.4
1,076,021	+		MPMX19_01036	0.27	+0.6
1,076,021	+		MPMX19_01036	0.27	-0.4
1,076,022	-		MPMX19_01036	0.27	+1.0
1,076,022	-		MPMX19_01036	0.27	-0.6
1,076,022	-		MPMX19_01036	0.27	+0.4
1,076,022	-		MPMX19_01036	0.27	-2.1
1,076,022	-		MPMX19_01036	0.27	+1.4
1,076,022	-		MPMX19_01036	0.27	-1.1
1,076,022	-		MPMX19_01036	0.27	-0.3
1,076,022	-		MPMX19_01036	0.27	-0.1
1,076,022	-		MPMX19_01036	0.27	-1.1
1,076,112	+		MPMX19_01036	0.50	-0.4
1,076,112	+		MPMX19_01036	0.50	-0.4
1,076,112	+		MPMX19_01036	0.50	+0.6
1,076,112	+		MPMX19_01036	0.50	-0.8
1,076,112	+		MPMX19_01036	0.50	+2.0
1,076,112	+		MPMX19_01036	0.50	+0.6
1,076,112	+		MPMX19_01036	0.50	-1.9
1,076,113	-		MPMX19_01036	0.51	-1.0
1,076,113	-		MPMX19_01036	0.51	-0.9
1,076,113	-		MPMX19_01036	0.51	-0.6
1,076,301	+				-0.4
1,076,301	+				-0.8
1,076,302	-				+1.3
1,076,366	+				+0.9
1,076,366	+				+0.1
1,076,366	+				+0.0
1,076,366	+				+0.1
1,076,366	+				+1.0
1,076,366	+				+0.2
1,076,366	+				+3.4
1,076,366	+				-1.9
1,076,366	+				+0.4
1,076,366	+				+0.4
1,076,366	+				-0.4
1,076,366	+				+0.2
1,076,366	+				-0.5
1,076,366	+				-0.7
1,076,366	+				-0.5
1,076,366	+				-1.7
1,076,367	-				-1.1
1,076,367	-				-0.6
1,076,367	-				-1.4
1,076,367	-				-0.8
1,076,367	-				-0.9
1,076,367	-				-0.1
1,076,367	-				-0.5
1,076,367	-				-0.2
1,076,367	-				-1.7
1,076,367	-				-0.1
1,076,367	-				+1.3
1,076,367	-				-0.7
1,076,367	-				+0.3
1,076,453	+		MPMX19_01037	0.12	+0.8
1,076,453	+		MPMX19_01037	0.12	+0.6
1,076,454	-		MPMX19_01037	0.12	+0.9
1,076,454	-		MPMX19_01037	0.12	+0.8
1,076,454	-		MPMX19_01037	0.12	-0.6
1,076,454	-		MPMX19_01037	0.12	+0.2
1,076,454	-		MPMX19_01037	0.12	-0.5
1,076,454	-		MPMX19_01037	0.12	-1.7
1,076,454	-		MPMX19_01037	0.12	-0.8
1,076,481	-		MPMX19_01037	0.15	-0.9
1,076,481	-		MPMX19_01037	0.15	+0.4
1,076,481	-		MPMX19_01037	0.15	-0.6
1,076,481	-		MPMX19_01037	0.15	+0.3