Experiment: MPec2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fepB and entS are separated by 3 nucleotides entS and fepD are separated by 110 nucleotides
BNILDI_21965: fepB - ferrienterobactin ABC transporter periplasmic binding protein, at 4,415,278 to 4,416,234
fepB
BNILDI_21970: entS - enterobactin exporter, iron-regulated, at 4,416,238 to 4,417,488
entS
BNILDI_21975: fepD - ferrienterobactin ABC transporter permease, at 4,417,599 to 4,418,603
fepD
Position (kb) 4416
4417
4418 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4415.256 kb on - strand at 4415.259 kb on - strand at 4415.261 kb on + strand at 4415.398 kb on - strand, within fepB at 4415.398 kb on - strand, within fepB at 4415.636 kb on + strand, within fepB at 4415.675 kb on - strand, within fepB at 4415.705 kb on + strand, within fepB at 4415.717 kb on - strand, within fepB at 4415.872 kb on + strand, within fepB at 4416.063 kb on - strand, within fepB at 4416.188 kb on - strand at 4416.219 kb on + strand at 4416.232 kb on + strand at 4416.240 kb on - strand at 4416.489 kb on + strand, within entS at 4416.489 kb on + strand, within entS at 4416.489 kb on + strand, within entS at 4416.489 kb on + strand, within entS at 4416.489 kb on + strand, within entS at 4416.489 kb on + strand, within entS at 4416.489 kb on + strand, within entS at 4416.489 kb on + strand, within entS at 4416.490 kb on - strand, within entS at 4416.490 kb on - strand, within entS at 4416.507 kb on + strand, within entS at 4416.639 kb on + strand, within entS at 4416.640 kb on - strand, within entS at 4416.757 kb on + strand, within entS at 4416.924 kb on + strand, within entS at 4416.928 kb on - strand, within entS at 4416.928 kb on - strand, within entS at 4416.928 kb on - strand, within entS at 4416.985 kb on + strand, within entS at 4417.058 kb on - strand, within entS at 4417.072 kb on + strand, within entS at 4417.145 kb on - strand, within entS at 4417.148 kb on + strand, within entS at 4417.148 kb on + strand, within entS at 4417.149 kb on - strand, within entS at 4417.149 kb on - strand, within entS at 4417.253 kb on + strand, within entS at 4417.254 kb on - strand, within entS at 4417.423 kb on + strand at 4417.424 kb on - strand at 4417.522 kb on + strand at 4417.523 kb on - strand at 4417.542 kb on + strand at 4417.543 kb on - strand at 4417.801 kb on + strand, within fepD at 4418.051 kb on - strand, within fepD at 4418.180 kb on + strand, within fepD at 4418.180 kb on + strand, within fepD at 4418.181 kb on - strand, within fepD at 4418.185 kb on + strand, within fepD at 4418.314 kb on + strand, within fepD at 4418.315 kb on - strand, within fepD at 4418.419 kb on + strand, within fepD at 4418.420 kb on - strand, within fepD at 4418.420 kb on - strand, within fepD
Per-strain Table
Position Strand Gene LocusTag Fraction MPec2 remove 4,415,256 - +1.2 4,415,259 - +1.2 4,415,261 + +1.8 4,415,398 - fepB BNILDI_21965 0.13 -1.1 4,415,398 - fepB BNILDI_21965 0.13 -0.3 4,415,636 + fepB BNILDI_21965 0.37 +0.4 4,415,675 - fepB BNILDI_21965 0.41 -0.7 4,415,705 + fepB BNILDI_21965 0.45 +0.4 4,415,717 - fepB BNILDI_21965 0.46 -0.1 4,415,872 + fepB BNILDI_21965 0.62 -1.0 4,416,063 - fepB BNILDI_21965 0.82 -0.3 4,416,188 - +0.4 4,416,219 + -1.5 4,416,232 + +0.3 4,416,240 - +2.4 4,416,489 + entS BNILDI_21970 0.20 -1.9 4,416,489 + entS BNILDI_21970 0.20 -2.1 4,416,489 + entS BNILDI_21970 0.20 +0.5 4,416,489 + entS BNILDI_21970 0.20 -0.4 4,416,489 + entS BNILDI_21970 0.20 +1.0 4,416,489 + entS BNILDI_21970 0.20 +0.3 4,416,489 + entS BNILDI_21970 0.20 +0.4 4,416,489 + entS BNILDI_21970 0.20 -0.9 4,416,490 - entS BNILDI_21970 0.20 +0.2 4,416,490 - entS BNILDI_21970 0.20 -0.5 4,416,507 + entS BNILDI_21970 0.22 +0.2 4,416,639 + entS BNILDI_21970 0.32 -0.6 4,416,640 - entS BNILDI_21970 0.32 -0.8 4,416,757 + entS BNILDI_21970 0.41 +0.5 4,416,924 + entS BNILDI_21970 0.55 +0.5 4,416,928 - entS BNILDI_21970 0.55 +0.4 4,416,928 - entS BNILDI_21970 0.55 -0.0 4,416,928 - entS BNILDI_21970 0.55 -0.3 4,416,985 + entS BNILDI_21970 0.60 +2.0 4,417,058 - entS BNILDI_21970 0.66 +0.2 4,417,072 + entS BNILDI_21970 0.67 -1.0 4,417,145 - entS BNILDI_21970 0.73 +1.0 4,417,148 + entS BNILDI_21970 0.73 -0.1 4,417,148 + entS BNILDI_21970 0.73 +2.0 4,417,149 - entS BNILDI_21970 0.73 +0.6 4,417,149 - entS BNILDI_21970 0.73 -0.6 4,417,253 + entS BNILDI_21970 0.81 -1.7 4,417,254 - entS BNILDI_21970 0.81 +0.7 4,417,423 + +1.2 4,417,424 - +0.4 4,417,522 + -0.6 4,417,523 - -0.0 4,417,542 + -0.0 4,417,543 - +0.7 4,417,801 + fepD BNILDI_21975 0.20 -0.5 4,418,051 - fepD BNILDI_21975 0.45 -0.3 4,418,180 + fepD BNILDI_21975 0.58 -1.6 4,418,180 + fepD BNILDI_21975 0.58 +0.8 4,418,181 - fepD BNILDI_21975 0.58 +0.4 4,418,185 + fepD BNILDI_21975 0.58 +1.0 4,418,314 + fepD BNILDI_21975 0.71 +2.0 4,418,315 - fepD BNILDI_21975 0.71 -0.2 4,418,419 + fepD BNILDI_21975 0.82 -0.1 4,418,420 - fepD BNILDI_21975 0.82 +1.6 4,418,420 - fepD BNILDI_21975 0.82 -0.7
Or see this region's nucleotide sequence