Strain Fitness in Escherichia coli ECRC62 around BNILDI_17375

Experiment: MPec2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MPec2
3,484,781	-	ydeQ	BNILDI_17370	0.33	+0.5
3,485,285	-	ydeQ	BNILDI_17370	0.88	+1.7
3,485,318	+				-0.9
3,485,381	-				+0.3
3,485,381	-				-0.2
3,485,413	+				-0.6
3,485,413	+				-0.9
3,485,547	+				+0.6
3,485,664	+				+0.4
3,485,724	-				+0.5
3,485,818	-				+0.1
3,485,830	+				-2.6
3,485,831	-				+0.6
3,485,970	+	ydeP	BNILDI_17375	0.11	+0.5
3,486,009	+	ydeP	BNILDI_17375	0.12	-0.7
3,486,014	-	ydeP	BNILDI_17375	0.13	-0.4
3,486,014	-	ydeP	BNILDI_17375	0.13	+1.7
3,486,069	-	ydeP	BNILDI_17375	0.15	+0.9
3,486,089	+	ydeP	BNILDI_17375	0.16	-0.0
3,486,146	+	ydeP	BNILDI_17375	0.18	+0.7
3,486,146	+	ydeP	BNILDI_17375	0.18	-0.9
3,486,147	-	ydeP	BNILDI_17375	0.18	-0.1
3,486,148	+	ydeP	BNILDI_17375	0.19	+0.7
3,486,149	-	ydeP	BNILDI_17375	0.19	-0.6
3,486,149	-	ydeP	BNILDI_17375	0.19	-0.1
3,486,376	+	ydeP	BNILDI_17375	0.29	-0.6
3,486,386	-	ydeP	BNILDI_17375	0.29	+0.7
3,486,551	+	ydeP	BNILDI_17375	0.36	-0.4
3,486,552	-	ydeP	BNILDI_17375	0.36	+1.7
3,486,552	-	ydeP	BNILDI_17375	0.36	-1.5
3,486,552	-	ydeP	BNILDI_17375	0.36	+1.7
3,486,553	+	ydeP	BNILDI_17375	0.36	+0.3
3,486,554	-	ydeP	BNILDI_17375	0.36	-0.6
3,486,554	-	ydeP	BNILDI_17375	0.36	-0.2
3,486,554	-	ydeP	BNILDI_17375	0.36	+0.1
3,486,667	+	ydeP	BNILDI_17375	0.41	+0.4
3,486,668	-	ydeP	BNILDI_17375	0.41	-0.2
3,486,699	+	ydeP	BNILDI_17375	0.43	+1.3
3,486,742	+	ydeP	BNILDI_17375	0.45	-0.6
3,486,754	-	ydeP	BNILDI_17375	0.45	+2.1
3,486,790	+	ydeP	BNILDI_17375	0.47	-0.0
3,486,791	-	ydeP	BNILDI_17375	0.47	+1.7
3,486,895	+	ydeP	BNILDI_17375	0.51	-0.1
3,486,943	+	ydeP	BNILDI_17375	0.53	+0.3
3,486,949	-	ydeP	BNILDI_17375	0.54	+0.4
3,487,077	+	ydeP	BNILDI_17375	0.59	+0.7
3,487,078	-	ydeP	BNILDI_17375	0.59	+0.2
3,487,081	+	ydeP	BNILDI_17375	0.59	-0.2
3,487,235	-	ydeP	BNILDI_17375	0.66	-0.8
3,487,235	-	ydeP	BNILDI_17375	0.66	+0.3
3,487,235	-	ydeP	BNILDI_17375	0.66	+1.7
3,487,235	-	ydeP	BNILDI_17375	0.66	-0.4
3,487,238	+	ydeP	BNILDI_17375	0.66	+0.4
3,487,238	+	ydeP	BNILDI_17375	0.66	-0.1
3,487,238	+	ydeP	BNILDI_17375	0.66	+0.5
3,487,239	-	ydeP	BNILDI_17375	0.66	-2.7
3,487,239	-	ydeP	BNILDI_17375	0.66	-1.3
3,487,239	-	ydeP	BNILDI_17375	0.66	-0.9
3,487,239	-	ydeP	BNILDI_17375	0.66	-0.4
3,487,239	-	ydeP	BNILDI_17375	0.66	+0.5
3,487,414	-	ydeP	BNILDI_17375	0.74	+0.5
3,487,439	+	ydeP	BNILDI_17375	0.75	-0.1
3,487,585	+	ydeP	BNILDI_17375	0.82	+0.2
3,487,591	+	ydeP	BNILDI_17375	0.82	+0.0
3,487,617	+	ydeP	BNILDI_17375	0.83	-0.6
3,487,617	+	ydeP	BNILDI_17375	0.83	+0.9
3,487,618	-	ydeP	BNILDI_17375	0.83	-0.1
3,487,646	-	ydeP	BNILDI_17375	0.84	-1.0
3,487,697	+	ydeP	BNILDI_17375	0.86	+0.7
3,487,725	+	ydeP	BNILDI_17375	0.88	+1.4
3,487,751	-	ydeP	BNILDI_17375	0.89	+0.4
3,487,782	+				+0.2
3,487,872	-				-0.5
3,488,195	-				-0.8
3,488,654	+	ydeO	BNILDI_17385	0.17	+1.9
3,488,947	+	ydeO	BNILDI_17385	0.55	-1.9