Experiment: MPec2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt obgE and yhbE are separated by 15 nucleotides yhbE and rpmA are separated by 126 nucleotides rpmA and rplU are separated by 20 nucleotides rplU and ispB are separated by 258 nucleotides
BNILDI_01700: obgE - GTPase ObgE, at 334,957 to 336,129
obgE
BNILDI_01705: yhbE - Uncharacterized inner membrane transporter YhbE, at 336,145 to 337,110
yhbE
BNILDI_01710: rpmA - 50S ribosomal protein L27, at 337,237 to 337,494
rpmA
BNILDI_01715: rplU - 50S ribosomal protein L21, at 337,515 to 337,826
rplU
BNILDI_01720: ispB - octaprenyl diphosphate synthase, at 338,085 to 339,056
ispB
Position (kb) 336
337
338 Strain fitness (log2 ratio) -2
-1
0
1
2 at 336.181 kb on - strand at 336.181 kb on - strand at 336.181 kb on - strand at 336.181 kb on - strand at 336.181 kb on - strand at 336.181 kb on - strand at 336.181 kb on - strand at 336.187 kb on - strand at 336.187 kb on - strand at 336.205 kb on - strand at 336.314 kb on - strand, within yhbE at 336.314 kb on - strand, within yhbE at 336.426 kb on + strand, within yhbE at 336.657 kb on + strand, within yhbE at 336.657 kb on + strand, within yhbE at 336.658 kb on - strand, within yhbE at 336.658 kb on - strand, within yhbE at 336.658 kb on - strand, within yhbE at 336.682 kb on - strand, within yhbE at 336.721 kb on + strand, within yhbE at 336.722 kb on - strand, within yhbE at 336.760 kb on + strand, within yhbE at 336.760 kb on + strand, within yhbE at 336.761 kb on - strand, within yhbE at 336.989 kb on + strand, within yhbE at 336.989 kb on + strand, within yhbE at 337.115 kb on + strand at 337.116 kb on - strand at 337.182 kb on - strand at 337.182 kb on - strand at 337.932 kb on + strand at 337.933 kb on - strand at 337.967 kb on + strand at 337.968 kb on - strand at 337.979 kb on + strand at 338.010 kb on + strand at 338.010 kb on + strand at 338.031 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MPec2 remove 336,181 - -0.1 336,181 - +1.1 336,181 - -1.0 336,181 - -0.1 336,181 - +0.9 336,181 - +0.3 336,181 - +0.7 336,187 - +0.5 336,187 - +0.1 336,205 - -0.4 336,314 - yhbE BNILDI_01705 0.17 -0.3 336,314 - yhbE BNILDI_01705 0.17 -0.2 336,426 + yhbE BNILDI_01705 0.29 -0.3 336,657 + yhbE BNILDI_01705 0.53 -2.3 336,657 + yhbE BNILDI_01705 0.53 +1.1 336,658 - yhbE BNILDI_01705 0.53 -1.6 336,658 - yhbE BNILDI_01705 0.53 +0.1 336,658 - yhbE BNILDI_01705 0.53 -0.3 336,682 - yhbE BNILDI_01705 0.56 -0.5 336,721 + yhbE BNILDI_01705 0.60 +1.5 336,722 - yhbE BNILDI_01705 0.60 +0.1 336,760 + yhbE BNILDI_01705 0.64 -1.3 336,760 + yhbE BNILDI_01705 0.64 +1.1 336,761 - yhbE BNILDI_01705 0.64 +0.4 336,989 + yhbE BNILDI_01705 0.87 -0.3 336,989 + yhbE BNILDI_01705 0.87 -0.9 337,115 + +2.1 337,116 - -0.3 337,182 - +2.1 337,182 - +0.1 337,932 + -1.4 337,933 - +0.1 337,967 + +0.6 337,968 - +0.2 337,979 + -0.9 338,010 + -0.2 338,010 + +0.0 338,031 + +0.1
Or see this region's nucleotide sequence