Experiment: Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS18135 and ABI39_RS18140 overlap by 4 nucleotides ABI39_RS18140 and ABI39_RS18145 overlap by 4 nucleotides
ABI39_RS18135: ABI39_RS18135 - hypothetical protein, at 4,576,237 to 4,577,439
_RS18135
ABI39_RS18140: ABI39_RS18140 - ATP-binding cassette domain-containing protein, at 4,577,436 to 4,578,080
_RS18140
ABI39_RS18145: ABI39_RS18145 - DUF4836 family protein, at 4,578,077 to 4,579,609
_RS18145
Position (kb) 4577
4578
4579 Strain fitness (log2 ratio) -2
-1
0
1 at 4576.501 kb on + strand, within ABI39_RS18135 at 4576.524 kb on + strand, within ABI39_RS18135 at 4576.530 kb on + strand, within ABI39_RS18135 at 4576.546 kb on + strand, within ABI39_RS18135 at 4576.736 kb on - strand, within ABI39_RS18135 at 4576.797 kb on + strand, within ABI39_RS18135 at 4576.891 kb on + strand, within ABI39_RS18135 at 4576.966 kb on - strand, within ABI39_RS18135 at 4576.999 kb on - strand, within ABI39_RS18135 at 4577.136 kb on + strand, within ABI39_RS18135 at 4577.248 kb on - strand, within ABI39_RS18135 at 4577.266 kb on + strand, within ABI39_RS18135 at 4577.267 kb on - strand, within ABI39_RS18135 at 4577.328 kb on - strand at 4577.544 kb on - strand, within ABI39_RS18140 at 4577.899 kb on + strand, within ABI39_RS18140 at 4577.900 kb on - strand, within ABI39_RS18140 at 4577.918 kb on - strand, within ABI39_RS18140 at 4577.918 kb on - strand, within ABI39_RS18140 at 4577.919 kb on + strand, within ABI39_RS18140 at 4577.920 kb on - strand, within ABI39_RS18140 at 4577.920 kb on - strand, within ABI39_RS18140 at 4577.920 kb on - strand, within ABI39_RS18140 at 4578.069 kb on + strand at 4578.069 kb on + strand at 4578.071 kb on + strand at 4578.074 kb on + strand at 4578.098 kb on + strand at 4578.110 kb on + strand at 4578.110 kb on + strand at 4578.136 kb on + strand at 4578.143 kb on - strand at 4578.146 kb on + strand at 4578.187 kb on - strand at 4578.338 kb on - strand, within ABI39_RS18145 at 4578.444 kb on + strand, within ABI39_RS18145 at 4578.505 kb on + strand, within ABI39_RS18145 at 4578.506 kb on - strand, within ABI39_RS18145 at 4578.584 kb on - strand, within ABI39_RS18145 at 4578.635 kb on + strand, within ABI39_RS18145 at 4578.646 kb on + strand, within ABI39_RS18145 at 4578.646 kb on + strand, within ABI39_RS18145 at 4578.650 kb on + strand, within ABI39_RS18145 at 4578.688 kb on + strand, within ABI39_RS18145 at 4578.754 kb on + strand, within ABI39_RS18145 at 4578.904 kb on - strand, within ABI39_RS18145 at 4578.958 kb on + strand, within ABI39_RS18145 at 4578.961 kb on + strand, within ABI39_RS18145 at 4578.973 kb on + strand, within ABI39_RS18145 at 4579.043 kb on + strand, within ABI39_RS18145 at 4579.044 kb on - strand, within ABI39_RS18145 at 4579.048 kb on - strand, within ABI39_RS18145
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose-6-Phosphate (C) remove 4,576,501 + ABI39_RS18135 0.22 +0.1 4,576,524 + ABI39_RS18135 0.24 +0.3 4,576,530 + ABI39_RS18135 0.24 -1.2 4,576,546 + ABI39_RS18135 0.26 -0.8 4,576,736 - ABI39_RS18135 0.41 -0.3 4,576,797 + ABI39_RS18135 0.47 +0.3 4,576,891 + ABI39_RS18135 0.54 -0.4 4,576,966 - ABI39_RS18135 0.61 -0.1 4,576,999 - ABI39_RS18135 0.63 +1.3 4,577,136 + ABI39_RS18135 0.75 -0.4 4,577,248 - ABI39_RS18135 0.84 -0.6 4,577,266 + ABI39_RS18135 0.86 -0.1 4,577,267 - ABI39_RS18135 0.86 -0.1 4,577,328 - +0.3 4,577,544 - ABI39_RS18140 0.17 -0.4 4,577,899 + ABI39_RS18140 0.72 -0.6 4,577,900 - ABI39_RS18140 0.72 +0.0 4,577,918 - ABI39_RS18140 0.75 -0.1 4,577,918 - ABI39_RS18140 0.75 +1.0 4,577,919 + ABI39_RS18140 0.75 -0.3 4,577,920 - ABI39_RS18140 0.75 +0.2 4,577,920 - ABI39_RS18140 0.75 +0.9 4,577,920 - ABI39_RS18140 0.75 +1.1 4,578,069 + -0.0 4,578,069 + -0.1 4,578,071 + -0.1 4,578,074 + -2.2 4,578,098 + +0.0 4,578,110 + -2.2 4,578,110 + -0.2 4,578,136 + -0.4 4,578,143 - +0.0 4,578,146 + +0.1 4,578,187 - +0.3 4,578,338 - ABI39_RS18145 0.17 -0.4 4,578,444 + ABI39_RS18145 0.24 -0.6 4,578,505 + ABI39_RS18145 0.28 +0.3 4,578,506 - ABI39_RS18145 0.28 +0.9 4,578,584 - ABI39_RS18145 0.33 +0.0 4,578,635 + ABI39_RS18145 0.36 -0.2 4,578,646 + ABI39_RS18145 0.37 -0.1 4,578,646 + ABI39_RS18145 0.37 +0.5 4,578,650 + ABI39_RS18145 0.37 -0.8 4,578,688 + ABI39_RS18145 0.40 +0.8 4,578,754 + ABI39_RS18145 0.44 +0.3 4,578,904 - ABI39_RS18145 0.54 -0.9 4,578,958 + ABI39_RS18145 0.57 +0.8 4,578,961 + ABI39_RS18145 0.58 +0.0 4,578,973 + ABI39_RS18145 0.58 +0.3 4,579,043 + ABI39_RS18145 0.63 +0.2 4,579,044 - ABI39_RS18145 0.63 +1.2 4,579,048 - ABI39_RS18145 0.63 +0.2
Or see this region's nucleotide sequence