Experiment: Bas68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt bcsZ and bcsB are separated by 6 nucleotides bcsB and bcsA are separated by 40 nucleotides
BNILDI_03410: bcsZ - cellulose synthase complex periplasmic endoglucanase BcsZ, at 668,861 to 669,967
bcsZ
BNILDI_03415: bcsB - cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB, at 669,974 to 672,283
bcsB
BNILDI_03420: bcsA - UDP-forming cellulose synthase catalytic subunit, at 672,324 to 674,942
bcsA
Position (kb) 669
670
671
672
673 Strain fitness (log2 ratio) -1
0
1
2
3 at 668.974 kb on - strand, within bcsZ at 668.977 kb on - strand, within bcsZ at 669.086 kb on - strand, within bcsZ at 669.225 kb on + strand, within bcsZ at 669.226 kb on - strand, within bcsZ at 669.226 kb on - strand, within bcsZ at 669.243 kb on + strand, within bcsZ at 669.244 kb on - strand, within bcsZ at 669.272 kb on + strand, within bcsZ at 669.273 kb on - strand, within bcsZ at 669.298 kb on - strand, within bcsZ at 669.298 kb on - strand, within bcsZ at 669.344 kb on + strand, within bcsZ at 669.344 kb on + strand, within bcsZ at 669.400 kb on - strand, within bcsZ at 669.424 kb on - strand, within bcsZ at 669.533 kb on + strand, within bcsZ at 669.534 kb on - strand, within bcsZ at 669.556 kb on + strand, within bcsZ at 669.556 kb on + strand, within bcsZ at 669.558 kb on + strand, within bcsZ at 669.655 kb on + strand, within bcsZ at 669.655 kb on + strand, within bcsZ at 669.787 kb on + strand, within bcsZ at 669.787 kb on + strand, within bcsZ at 669.788 kb on - strand, within bcsZ at 669.864 kb on + strand at 670.009 kb on + strand at 670.009 kb on + strand at 670.010 kb on - strand at 670.046 kb on + strand at 670.047 kb on - strand at 670.102 kb on - strand at 670.133 kb on + strand at 670.133 kb on + strand at 670.134 kb on - strand at 670.137 kb on + strand at 670.137 kb on + strand at 670.138 kb on - strand at 670.140 kb on + strand at 670.157 kb on + strand at 670.157 kb on + strand at 670.158 kb on - strand at 670.457 kb on + strand, within bcsB at 670.457 kb on + strand, within bcsB at 670.457 kb on + strand, within bcsB at 670.606 kb on + strand, within bcsB at 670.606 kb on + strand, within bcsB at 670.606 kb on + strand, within bcsB at 670.607 kb on - strand, within bcsB at 670.719 kb on - strand, within bcsB at 670.719 kb on - strand, within bcsB at 670.744 kb on - strand, within bcsB at 670.746 kb on + strand, within bcsB at 670.746 kb on + strand, within bcsB at 670.747 kb on - strand, within bcsB at 670.747 kb on - strand, within bcsB at 670.810 kb on + strand, within bcsB at 670.813 kb on + strand, within bcsB at 670.813 kb on + strand, within bcsB at 670.814 kb on - strand, within bcsB at 670.814 kb on - strand, within bcsB at 670.814 kb on - strand, within bcsB at 670.849 kb on + strand, within bcsB at 670.849 kb on + strand, within bcsB at 670.850 kb on - strand, within bcsB at 670.850 kb on - strand, within bcsB at 670.850 kb on - strand, within bcsB at 670.850 kb on - strand, within bcsB at 670.850 kb on - strand, within bcsB at 670.851 kb on + strand, within bcsB at 670.852 kb on - strand, within bcsB at 670.852 kb on - strand, within bcsB at 670.852 kb on - strand, within bcsB at 671.067 kb on + strand, within bcsB at 671.071 kb on + strand, within bcsB at 671.071 kb on + strand, within bcsB at 671.071 kb on + strand, within bcsB at 671.072 kb on - strand, within bcsB at 671.106 kb on + strand, within bcsB at 671.168 kb on + strand, within bcsB at 671.168 kb on + strand, within bcsB at 671.218 kb on + strand, within bcsB at 671.383 kb on - strand, within bcsB at 671.508 kb on + strand, within bcsB at 671.508 kb on + strand, within bcsB at 671.508 kb on + strand, within bcsB at 671.509 kb on - strand, within bcsB at 671.703 kb on + strand, within bcsB at 671.704 kb on - strand, within bcsB at 671.704 kb on - strand, within bcsB at 671.824 kb on + strand, within bcsB at 671.825 kb on - strand, within bcsB at 671.917 kb on - strand, within bcsB at 671.946 kb on - strand, within bcsB at 671.965 kb on - strand, within bcsB at 671.965 kb on - strand, within bcsB at 672.047 kb on + strand, within bcsB at 672.048 kb on - strand, within bcsB at 672.198 kb on - strand at 672.432 kb on + strand at 672.433 kb on - strand at 672.500 kb on + strand at 672.561 kb on - strand at 672.561 kb on - strand at 672.578 kb on + strand at 672.579 kb on - strand at 672.579 kb on - strand at 672.579 kb on - strand at 672.579 kb on - strand at 672.676 kb on + strand, within bcsA at 672.676 kb on + strand, within bcsA at 672.676 kb on + strand, within bcsA at 672.677 kb on - strand, within bcsA at 672.677 kb on - strand, within bcsA at 672.695 kb on + strand, within bcsA at 672.859 kb on - strand, within bcsA at 672.914 kb on - strand, within bcsA at 672.929 kb on + strand, within bcsA at 672.930 kb on - strand, within bcsA at 672.930 kb on - strand, within bcsA at 672.930 kb on - strand, within bcsA at 672.968 kb on - strand, within bcsA at 672.968 kb on - strand, within bcsA at 672.968 kb on - strand, within bcsA at 673.011 kb on + strand, within bcsA at 673.027 kb on + strand, within bcsA at 673.027 kb on + strand, within bcsA at 673.027 kb on + strand, within bcsA at 673.028 kb on - strand, within bcsA at 673.091 kb on + strand, within bcsA at 673.143 kb on - strand, within bcsA at 673.144 kb on + strand, within bcsA at 673.144 kb on + strand, within bcsA at 673.144 kb on + strand, within bcsA at 673.145 kb on - strand, within bcsA at 673.145 kb on - strand, within bcsA at 673.166 kb on - strand, within bcsA at 673.192 kb on + strand, within bcsA at 673.235 kb on + strand, within bcsA at 673.251 kb on + strand, within bcsA at 673.276 kb on + strand, within bcsA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas68 remove 668,974 - bcsZ BNILDI_03410 0.10 +0.4 668,977 - bcsZ BNILDI_03410 0.10 +0.8 669,086 - bcsZ BNILDI_03410 0.20 -0.1 669,225 + bcsZ BNILDI_03410 0.33 -1.3 669,226 - bcsZ BNILDI_03410 0.33 -0.1 669,226 - bcsZ BNILDI_03410 0.33 -0.5 669,243 + bcsZ BNILDI_03410 0.35 +0.2 669,244 - bcsZ BNILDI_03410 0.35 +0.5 669,272 + bcsZ BNILDI_03410 0.37 +0.6 669,273 - bcsZ BNILDI_03410 0.37 +0.2 669,298 - bcsZ BNILDI_03410 0.39 -1.0 669,298 - bcsZ BNILDI_03410 0.39 -0.2 669,344 + bcsZ BNILDI_03410 0.44 +3.6 669,344 + bcsZ BNILDI_03410 0.44 -0.8 669,400 - bcsZ BNILDI_03410 0.49 -0.2 669,424 - bcsZ BNILDI_03410 0.51 -0.5 669,533 + bcsZ BNILDI_03410 0.61 -0.1 669,534 - bcsZ BNILDI_03410 0.61 -0.2 669,556 + bcsZ BNILDI_03410 0.63 -0.5 669,556 + bcsZ BNILDI_03410 0.63 -0.4 669,558 + bcsZ BNILDI_03410 0.63 -1.3 669,655 + bcsZ BNILDI_03410 0.72 -0.5 669,655 + bcsZ BNILDI_03410 0.72 -0.4 669,787 + bcsZ BNILDI_03410 0.84 +1.9 669,787 + bcsZ BNILDI_03410 0.84 +1.1 669,788 - bcsZ BNILDI_03410 0.84 +0.1 669,864 + -0.4 670,009 + +1.4 670,009 + -0.4 670,010 - -0.1 670,046 + +0.2 670,047 - +1.1 670,102 - -0.1 670,133 + -0.1 670,133 + -0.5 670,134 - -1.1 670,137 + +0.6 670,137 + +0.3 670,138 - +0.5 670,140 + +1.1 670,157 + +2.1 670,157 + +0.1 670,158 - -1.1 670,457 + bcsB BNILDI_03415 0.21 -1.3 670,457 + bcsB BNILDI_03415 0.21 +0.7 670,457 + bcsB BNILDI_03415 0.21 +1.5 670,606 + bcsB BNILDI_03415 0.27 +0.3 670,606 + bcsB BNILDI_03415 0.27 +2.1 670,606 + bcsB BNILDI_03415 0.27 +0.3 670,607 - bcsB BNILDI_03415 0.27 -0.0 670,719 - bcsB BNILDI_03415 0.32 -0.8 670,719 - bcsB BNILDI_03415 0.32 -0.8 670,744 - bcsB BNILDI_03415 0.33 -0.4 670,746 + bcsB BNILDI_03415 0.33 +0.3 670,746 + bcsB BNILDI_03415 0.33 +0.5 670,747 - bcsB BNILDI_03415 0.33 -0.3 670,747 - bcsB BNILDI_03415 0.33 -0.0 670,810 + bcsB BNILDI_03415 0.36 -0.3 670,813 + bcsB BNILDI_03415 0.36 -0.2 670,813 + bcsB BNILDI_03415 0.36 -1.6 670,814 - bcsB BNILDI_03415 0.36 -0.9 670,814 - bcsB BNILDI_03415 0.36 +0.3 670,814 - bcsB BNILDI_03415 0.36 +0.6 670,849 + bcsB BNILDI_03415 0.38 -0.3 670,849 + bcsB BNILDI_03415 0.38 +0.2 670,850 - bcsB BNILDI_03415 0.38 -1.1 670,850 - bcsB BNILDI_03415 0.38 +0.2 670,850 - bcsB BNILDI_03415 0.38 +0.3 670,850 - bcsB BNILDI_03415 0.38 +0.7 670,850 - bcsB BNILDI_03415 0.38 -0.9 670,851 + bcsB BNILDI_03415 0.38 -0.8 670,852 - bcsB BNILDI_03415 0.38 +0.4 670,852 - bcsB BNILDI_03415 0.38 -0.1 670,852 - bcsB BNILDI_03415 0.38 +0.6 671,067 + bcsB BNILDI_03415 0.47 +1.8 671,071 + bcsB BNILDI_03415 0.47 -1.5 671,071 + bcsB BNILDI_03415 0.47 +0.2 671,071 + bcsB BNILDI_03415 0.47 -0.4 671,072 - bcsB BNILDI_03415 0.48 -0.8 671,106 + bcsB BNILDI_03415 0.49 +1.4 671,168 + bcsB BNILDI_03415 0.52 -0.2 671,168 + bcsB BNILDI_03415 0.52 +0.3 671,218 + bcsB BNILDI_03415 0.54 -0.0 671,383 - bcsB BNILDI_03415 0.61 -0.8 671,508 + bcsB BNILDI_03415 0.66 +0.3 671,508 + bcsB BNILDI_03415 0.66 +1.1 671,508 + bcsB BNILDI_03415 0.66 +2.1 671,509 - bcsB BNILDI_03415 0.66 +1.6 671,703 + bcsB BNILDI_03415 0.75 -0.8 671,704 - bcsB BNILDI_03415 0.75 -0.5 671,704 - bcsB BNILDI_03415 0.75 +2.1 671,824 + bcsB BNILDI_03415 0.80 +2.1 671,825 - bcsB BNILDI_03415 0.80 -1.0 671,917 - bcsB BNILDI_03415 0.84 -0.2 671,946 - bcsB BNILDI_03415 0.85 -0.2 671,965 - bcsB BNILDI_03415 0.86 -1.3 671,965 - bcsB BNILDI_03415 0.86 -0.0 672,047 + bcsB BNILDI_03415 0.90 +0.6 672,048 - bcsB BNILDI_03415 0.90 -0.3 672,198 - +0.1 672,432 + +0.1 672,433 - +1.6 672,500 + +0.5 672,561 - +1.3 672,561 - +0.2 672,578 + -0.1 672,579 - +1.6 672,579 - -0.3 672,579 - +0.5 672,579 - +0.1 672,676 + bcsA BNILDI_03420 0.13 -0.3 672,676 + bcsA BNILDI_03420 0.13 +0.4 672,676 + bcsA BNILDI_03420 0.13 +0.4 672,677 - bcsA BNILDI_03420 0.13 -0.0 672,677 - bcsA BNILDI_03420 0.13 -0.0 672,695 + bcsA BNILDI_03420 0.14 +0.4 672,859 - bcsA BNILDI_03420 0.20 -0.3 672,914 - bcsA BNILDI_03420 0.23 +0.2 672,929 + bcsA BNILDI_03420 0.23 -1.4 672,930 - bcsA BNILDI_03420 0.23 -0.9 672,930 - bcsA BNILDI_03420 0.23 +0.4 672,930 - bcsA BNILDI_03420 0.23 +1.5 672,968 - bcsA BNILDI_03420 0.25 +0.6 672,968 - bcsA BNILDI_03420 0.25 -0.6 672,968 - bcsA BNILDI_03420 0.25 -1.3 673,011 + bcsA BNILDI_03420 0.26 +0.7 673,027 + bcsA BNILDI_03420 0.27 -0.1 673,027 + bcsA BNILDI_03420 0.27 -0.3 673,027 + bcsA BNILDI_03420 0.27 -0.1 673,028 - bcsA BNILDI_03420 0.27 +0.5 673,091 + bcsA BNILDI_03420 0.29 -0.1 673,143 - bcsA BNILDI_03420 0.31 +0.6 673,144 + bcsA BNILDI_03420 0.31 -0.1 673,144 + bcsA BNILDI_03420 0.31 +0.4 673,144 + bcsA BNILDI_03420 0.31 -0.7 673,145 - bcsA BNILDI_03420 0.31 +0.2 673,145 - bcsA BNILDI_03420 0.31 -0.8 673,166 - bcsA BNILDI_03420 0.32 -0.3 673,192 + bcsA BNILDI_03420 0.33 -0.3 673,235 + bcsA BNILDI_03420 0.35 +1.1 673,251 + bcsA BNILDI_03420 0.35 +0.1 673,276 + bcsA BNILDI_03420 0.36 -1.5
Or see this region's nucleotide sequence