Experiment: Bas68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BNILDI_03145 and rbbA overlap by 1 nucleotides rbbA and yhiI overlap by 4 nucleotides
BNILDI_03145: BNILDI_03145 - ABC-2 family transporter protein, at 605,427 to 606,551
_03145
BNILDI_03150: rbbA - ribosome-associated ATPase/putative transporter RbbA, at 606,551 to 609,286
rbbA
BNILDI_03155: yhiI - Uncharacterized protein YhiI, at 609,283 to 610,350
yhiI
Position (kb) 606
607
608
609
610 Strain fitness (log2 ratio) -2
-1
0
1
2 at 605.598 kb on - strand, within BNILDI_03145 at 605.598 kb on - strand, within BNILDI_03145 at 605.598 kb on - strand, within BNILDI_03145 at 605.598 kb on - strand, within BNILDI_03145 at 605.622 kb on - strand, within BNILDI_03145 at 605.723 kb on + strand, within BNILDI_03145 at 605.977 kb on - strand, within BNILDI_03145 at 605.993 kb on + strand, within BNILDI_03145 at 605.993 kb on + strand, within BNILDI_03145 at 606.148 kb on + strand, within BNILDI_03145 at 606.149 kb on - strand, within BNILDI_03145 at 606.267 kb on - strand, within BNILDI_03145 at 606.267 kb on - strand, within BNILDI_03145 at 606.442 kb on + strand at 606.455 kb on + strand at 606.488 kb on + strand at 606.580 kb on + strand at 606.584 kb on + strand at 606.584 kb on + strand at 606.584 kb on + strand at 606.584 kb on + strand at 606.585 kb on - strand at 606.829 kb on + strand, within rbbA at 606.872 kb on - strand, within rbbA at 606.872 kb on - strand, within rbbA at 606.873 kb on + strand, within rbbA at 606.873 kb on + strand, within rbbA at 606.874 kb on - strand, within rbbA at 606.874 kb on - strand, within rbbA at 606.874 kb on - strand, within rbbA at 606.984 kb on + strand, within rbbA at 606.985 kb on - strand, within rbbA at 607.035 kb on + strand, within rbbA at 607.035 kb on + strand, within rbbA at 607.036 kb on - strand, within rbbA at 607.036 kb on - strand, within rbbA at 607.036 kb on - strand, within rbbA at 607.089 kb on - strand, within rbbA at 607.187 kb on - strand, within rbbA at 607.337 kb on - strand, within rbbA at 607.391 kb on - strand, within rbbA at 607.425 kb on + strand, within rbbA at 607.426 kb on - strand, within rbbA at 607.654 kb on + strand, within rbbA at 607.672 kb on + strand, within rbbA at 607.758 kb on + strand, within rbbA at 607.906 kb on + strand, within rbbA at 608.001 kb on - strand, within rbbA at 608.081 kb on - strand, within rbbA at 608.081 kb on - strand, within rbbA at 608.101 kb on + strand, within rbbA at 608.172 kb on - strand, within rbbA at 608.205 kb on + strand, within rbbA at 608.227 kb on + strand, within rbbA at 608.228 kb on - strand, within rbbA at 608.229 kb on + strand, within rbbA at 608.230 kb on - strand, within rbbA at 608.230 kb on - strand, within rbbA at 608.230 kb on - strand, within rbbA at 608.540 kb on + strand, within rbbA at 608.541 kb on - strand, within rbbA at 608.543 kb on - strand, within rbbA at 608.583 kb on - strand, within rbbA at 608.662 kb on + strand, within rbbA at 608.663 kb on - strand, within rbbA at 608.664 kb on + strand, within rbbA at 608.664 kb on + strand, within rbbA at 608.665 kb on - strand, within rbbA at 608.665 kb on - strand, within rbbA at 608.690 kb on - strand, within rbbA at 608.690 kb on - strand, within rbbA at 608.710 kb on + strand, within rbbA at 608.711 kb on - strand, within rbbA at 608.876 kb on + strand, within rbbA at 608.902 kb on + strand, within rbbA at 608.903 kb on - strand, within rbbA at 608.903 kb on - strand, within rbbA at 609.125 kb on + strand at 609.125 kb on + strand at 609.169 kb on + strand at 609.193 kb on + strand at 609.194 kb on - strand at 609.194 kb on - strand at 609.194 kb on - strand at 609.196 kb on + strand at 609.196 kb on + strand at 609.196 kb on + strand at 609.196 kb on + strand at 609.197 kb on - strand at 609.223 kb on - strand at 609.513 kb on + strand, within yhiI at 609.603 kb on + strand, within yhiI at 609.604 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.606 kb on - strand, within yhiI at 609.627 kb on + strand, within yhiI at 609.790 kb on - strand, within yhiI at 609.795 kb on + strand, within yhiI at 609.795 kb on + strand, within yhiI at 609.795 kb on + strand, within yhiI at 609.796 kb on - strand, within yhiI at 609.820 kb on - strand, within yhiI at 609.820 kb on - strand, within yhiI at 609.943 kb on - strand, within yhiI
Per-strain Table
Position Strand Gene LocusTag Fraction Bas68 remove 605,598 - BNILDI_03145 0.15 -0.2 605,598 - BNILDI_03145 0.15 -1.1 605,598 - BNILDI_03145 0.15 -1.6 605,598 - BNILDI_03145 0.15 +0.4 605,622 - BNILDI_03145 0.17 +0.6 605,723 + BNILDI_03145 0.26 -0.5 605,977 - BNILDI_03145 0.49 -1.1 605,993 + BNILDI_03145 0.50 -1.3 605,993 + BNILDI_03145 0.50 +0.2 606,148 + BNILDI_03145 0.64 +0.7 606,149 - BNILDI_03145 0.64 -1.0 606,267 - BNILDI_03145 0.75 +0.5 606,267 - BNILDI_03145 0.75 +0.5 606,442 + +0.3 606,455 + -0.3 606,488 + +1.6 606,580 + +0.7 606,584 + -0.1 606,584 + +2.0 606,584 + +1.0 606,584 + -0.6 606,585 - +2.6 606,829 + rbbA BNILDI_03150 0.10 -0.0 606,872 - rbbA BNILDI_03150 0.12 +2.2 606,872 - rbbA BNILDI_03150 0.12 -0.4 606,873 + rbbA BNILDI_03150 0.12 +0.6 606,873 + rbbA BNILDI_03150 0.12 -0.2 606,874 - rbbA BNILDI_03150 0.12 -0.8 606,874 - rbbA BNILDI_03150 0.12 -0.3 606,874 - rbbA BNILDI_03150 0.12 +0.1 606,984 + rbbA BNILDI_03150 0.16 +0.5 606,985 - rbbA BNILDI_03150 0.16 -1.0 607,035 + rbbA BNILDI_03150 0.18 -0.9 607,035 + rbbA BNILDI_03150 0.18 +0.4 607,036 - rbbA BNILDI_03150 0.18 +0.3 607,036 - rbbA BNILDI_03150 0.18 +0.9 607,036 - rbbA BNILDI_03150 0.18 -0.4 607,089 - rbbA BNILDI_03150 0.20 -0.1 607,187 - rbbA BNILDI_03150 0.23 +2.6 607,337 - rbbA BNILDI_03150 0.29 +0.8 607,391 - rbbA BNILDI_03150 0.31 -0.6 607,425 + rbbA BNILDI_03150 0.32 +0.0 607,426 - rbbA BNILDI_03150 0.32 -0.6 607,654 + rbbA BNILDI_03150 0.40 -2.1 607,672 + rbbA BNILDI_03150 0.41 +0.7 607,758 + rbbA BNILDI_03150 0.44 -1.0 607,906 + rbbA BNILDI_03150 0.50 -0.0 608,001 - rbbA BNILDI_03150 0.53 +1.0 608,081 - rbbA BNILDI_03150 0.56 +0.0 608,081 - rbbA BNILDI_03150 0.56 +0.3 608,101 + rbbA BNILDI_03150 0.57 +0.1 608,172 - rbbA BNILDI_03150 0.59 +0.5 608,205 + rbbA BNILDI_03150 0.60 -0.2 608,227 + rbbA BNILDI_03150 0.61 -0.7 608,228 - rbbA BNILDI_03150 0.61 -0.6 608,229 + rbbA BNILDI_03150 0.61 -1.2 608,230 - rbbA BNILDI_03150 0.61 +0.4 608,230 - rbbA BNILDI_03150 0.61 -0.6 608,230 - rbbA BNILDI_03150 0.61 -0.4 608,540 + rbbA BNILDI_03150 0.73 -0.6 608,541 - rbbA BNILDI_03150 0.73 +0.4 608,543 - rbbA BNILDI_03150 0.73 +0.9 608,583 - rbbA BNILDI_03150 0.74 -0.6 608,662 + rbbA BNILDI_03150 0.77 +0.0 608,663 - rbbA BNILDI_03150 0.77 -0.3 608,664 + rbbA BNILDI_03150 0.77 -0.6 608,664 + rbbA BNILDI_03150 0.77 -0.7 608,665 - rbbA BNILDI_03150 0.77 +0.2 608,665 - rbbA BNILDI_03150 0.77 -0.2 608,690 - rbbA BNILDI_03150 0.78 -0.6 608,690 - rbbA BNILDI_03150 0.78 -0.5 608,710 + rbbA BNILDI_03150 0.79 -1.3 608,711 - rbbA BNILDI_03150 0.79 -0.6 608,876 + rbbA BNILDI_03150 0.85 -0.8 608,902 + rbbA BNILDI_03150 0.86 -0.1 608,903 - rbbA BNILDI_03150 0.86 +0.3 608,903 - rbbA BNILDI_03150 0.86 +0.6 609,125 + +0.9 609,125 + +0.0 609,169 + -0.3 609,193 + -1.3 609,194 - +1.0 609,194 - -0.3 609,194 - +0.4 609,196 + -0.6 609,196 + +1.4 609,196 + -0.2 609,196 + +0.7 609,197 - +0.5 609,223 - -0.0 609,513 + yhiI BNILDI_03155 0.22 -0.7 609,603 + yhiI BNILDI_03155 0.30 +2.0 609,604 - yhiI BNILDI_03155 0.30 +0.3 609,606 - yhiI BNILDI_03155 0.30 +0.6 609,606 - yhiI BNILDI_03155 0.30 -0.8 609,606 - yhiI BNILDI_03155 0.30 +0.2 609,606 - yhiI BNILDI_03155 0.30 -0.4 609,606 - yhiI BNILDI_03155 0.30 -1.0 609,606 - yhiI BNILDI_03155 0.30 +0.0 609,627 + yhiI BNILDI_03155 0.32 +0.6 609,790 - yhiI BNILDI_03155 0.47 -0.8 609,795 + yhiI BNILDI_03155 0.48 -1.0 609,795 + yhiI BNILDI_03155 0.48 +0.5 609,795 + yhiI BNILDI_03155 0.48 +0.3 609,796 - yhiI BNILDI_03155 0.48 -0.0 609,820 - yhiI BNILDI_03155 0.50 -0.4 609,820 - yhiI BNILDI_03155 0.50 -0.3 609,943 - yhiI BNILDI_03155 0.62 +0.0
Or see this region's nucleotide sequence