Experiment: Bas68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yqhG and yqhH are separated by 50 nucleotides yqhH and ygiQ are separated by 42 nucleotides ygiQ and ftsP are separated by 110 nucleotides
BNILDI_00810: yqhG - Uncharacterized protein YqhG, at 154,881 to 155,807
yqhG
BNILDI_00815: yqhH - lipoprotein YqhH, at 155,858 to 156,115
yqhH
BNILDI_00820: ygiQ - YgiQ family radical SAM protein, at 156,158 to 158,377
ygiQ
BNILDI_00825: ftsP - cell division protein FtsP, at 158,488 to 159,900
ftsP
Position (kb) 156
157
158
159 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 155.235 kb on - strand, within yqhG at 155.324 kb on - strand, within yqhG at 155.324 kb on - strand, within yqhG at 155.324 kb on - strand, within yqhG at 155.333 kb on + strand, within yqhG at 155.420 kb on + strand, within yqhG at 155.421 kb on - strand, within yqhG at 155.491 kb on - strand, within yqhG at 155.556 kb on + strand, within yqhG at 155.661 kb on - strand, within yqhG at 155.702 kb on - strand, within yqhG at 155.765 kb on + strand at 155.839 kb on - strand at 155.856 kb on - strand at 155.856 kb on - strand at 155.856 kb on - strand at 156.006 kb on + strand, within yqhH at 156.040 kb on + strand, within yqhH at 156.100 kb on + strand at 156.100 kb on + strand at 156.100 kb on + strand at 156.101 kb on - strand at 156.241 kb on + strand at 156.458 kb on - strand, within ygiQ at 156.508 kb on + strand, within ygiQ at 156.509 kb on - strand, within ygiQ at 156.511 kb on - strand, within ygiQ at 156.543 kb on + strand, within ygiQ at 156.544 kb on - strand, within ygiQ at 156.546 kb on + strand, within ygiQ at 156.546 kb on + strand, within ygiQ at 156.546 kb on + strand, within ygiQ at 156.547 kb on - strand, within ygiQ at 156.547 kb on - strand, within ygiQ at 156.682 kb on - strand, within ygiQ at 156.704 kb on - strand, within ygiQ at 156.724 kb on + strand, within ygiQ at 156.725 kb on - strand, within ygiQ at 156.725 kb on - strand, within ygiQ at 156.750 kb on + strand, within ygiQ at 156.750 kb on + strand, within ygiQ at 156.891 kb on - strand, within ygiQ at 157.057 kb on + strand, within ygiQ at 157.057 kb on + strand, within ygiQ at 157.057 kb on + strand, within ygiQ at 157.057 kb on + strand, within ygiQ at 157.058 kb on - strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.059 kb on + strand, within ygiQ at 157.060 kb on - strand, within ygiQ at 157.060 kb on - strand, within ygiQ at 157.060 kb on - strand, within ygiQ at 157.060 kb on - strand, within ygiQ at 157.060 kb on - strand, within ygiQ at 157.060 kb on - strand, within ygiQ at 157.060 kb on - strand, within ygiQ at 157.060 kb on - strand, within ygiQ at 157.196 kb on - strand, within ygiQ at 157.196 kb on - strand, within ygiQ at 157.377 kb on + strand, within ygiQ at 157.378 kb on - strand, within ygiQ at 157.458 kb on + strand, within ygiQ at 157.715 kb on - strand, within ygiQ at 157.914 kb on - strand, within ygiQ at 157.933 kb on + strand, within ygiQ at 157.947 kb on + strand, within ygiQ at 157.948 kb on - strand, within ygiQ at 157.999 kb on - strand, within ygiQ at 158.015 kb on + strand, within ygiQ at 158.015 kb on + strand, within ygiQ at 158.033 kb on - strand, within ygiQ at 158.173 kb on + strand at 158.174 kb on - strand at 158.369 kb on - strand at 158.404 kb on - strand at 158.421 kb on + strand at 158.421 kb on + strand at 158.422 kb on - strand at 158.422 kb on - strand at 158.423 kb on + strand at 158.423 kb on + strand at 158.423 kb on + strand at 158.424 kb on - strand at 158.453 kb on - strand at 158.459 kb on + strand at 158.634 kb on + strand, within ftsP at 158.699 kb on - strand, within ftsP at 158.782 kb on - strand, within ftsP at 158.808 kb on + strand, within ftsP at 158.809 kb on - strand, within ftsP at 158.961 kb on + strand, within ftsP at 159.049 kb on - strand, within ftsP at 159.145 kb on + strand, within ftsP at 159.169 kb on + strand, within ftsP at 159.169 kb on + strand, within ftsP at 159.170 kb on - strand, within ftsP
Per-strain Table
Position Strand Gene LocusTag Fraction Bas68 remove 155,235 - yqhG BNILDI_00810 0.38 -0.2 155,324 - yqhG BNILDI_00810 0.48 -0.1 155,324 - yqhG BNILDI_00810 0.48 -0.5 155,324 - yqhG BNILDI_00810 0.48 -1.9 155,333 + yqhG BNILDI_00810 0.49 +0.3 155,420 + yqhG BNILDI_00810 0.58 +1.0 155,421 - yqhG BNILDI_00810 0.58 -0.4 155,491 - yqhG BNILDI_00810 0.66 +0.4 155,556 + yqhG BNILDI_00810 0.73 +0.5 155,661 - yqhG BNILDI_00810 0.84 -0.6 155,702 - yqhG BNILDI_00810 0.89 +0.4 155,765 + -0.1 155,839 - +0.3 155,856 - -0.0 155,856 - +0.2 155,856 - -0.1 156,006 + yqhH BNILDI_00815 0.57 +0.6 156,040 + yqhH BNILDI_00815 0.71 +0.1 156,100 + +1.0 156,100 + -0.1 156,100 + -0.1 156,101 - +1.3 156,241 + -0.2 156,458 - ygiQ BNILDI_00820 0.14 -1.2 156,508 + ygiQ BNILDI_00820 0.16 -0.4 156,509 - ygiQ BNILDI_00820 0.16 +0.1 156,511 - ygiQ BNILDI_00820 0.16 -0.8 156,543 + ygiQ BNILDI_00820 0.17 -0.2 156,544 - ygiQ BNILDI_00820 0.17 -0.7 156,546 + ygiQ BNILDI_00820 0.17 +1.0 156,546 + ygiQ BNILDI_00820 0.17 +0.6 156,546 + ygiQ BNILDI_00820 0.17 +0.3 156,547 - ygiQ BNILDI_00820 0.18 -0.1 156,547 - ygiQ BNILDI_00820 0.18 -0.0 156,682 - ygiQ BNILDI_00820 0.24 +2.0 156,704 - ygiQ BNILDI_00820 0.25 +0.4 156,724 + ygiQ BNILDI_00820 0.25 +0.4 156,725 - ygiQ BNILDI_00820 0.26 +0.5 156,725 - ygiQ BNILDI_00820 0.26 +0.4 156,750 + ygiQ BNILDI_00820 0.27 +0.4 156,750 + ygiQ BNILDI_00820 0.27 -0.0 156,891 - ygiQ BNILDI_00820 0.33 +1.6 157,057 + ygiQ BNILDI_00820 0.40 +1.0 157,057 + ygiQ BNILDI_00820 0.40 -0.4 157,057 + ygiQ BNILDI_00820 0.40 +1.7 157,057 + ygiQ BNILDI_00820 0.40 +0.7 157,058 - ygiQ BNILDI_00820 0.41 +0.6 157,059 + ygiQ BNILDI_00820 0.41 +0.2 157,059 + ygiQ BNILDI_00820 0.41 -1.5 157,059 + ygiQ BNILDI_00820 0.41 +2.1 157,059 + ygiQ BNILDI_00820 0.41 -0.7 157,059 + ygiQ BNILDI_00820 0.41 +0.7 157,059 + ygiQ BNILDI_00820 0.41 +0.2 157,059 + ygiQ BNILDI_00820 0.41 +0.6 157,059 + ygiQ BNILDI_00820 0.41 +2.0 157,059 + ygiQ BNILDI_00820 0.41 +0.2 157,060 - ygiQ BNILDI_00820 0.41 +0.9 157,060 - ygiQ BNILDI_00820 0.41 +0.2 157,060 - ygiQ BNILDI_00820 0.41 +1.0 157,060 - ygiQ BNILDI_00820 0.41 -0.2 157,060 - ygiQ BNILDI_00820 0.41 -0.6 157,060 - ygiQ BNILDI_00820 0.41 +2.5 157,060 - ygiQ BNILDI_00820 0.41 -0.5 157,060 - ygiQ BNILDI_00820 0.41 +0.1 157,196 - ygiQ BNILDI_00820 0.47 -0.1 157,196 - ygiQ BNILDI_00820 0.47 +0.4 157,377 + ygiQ BNILDI_00820 0.55 -0.9 157,378 - ygiQ BNILDI_00820 0.55 -0.0 157,458 + ygiQ BNILDI_00820 0.59 -0.5 157,715 - ygiQ BNILDI_00820 0.70 -0.1 157,914 - ygiQ BNILDI_00820 0.79 -2.7 157,933 + ygiQ BNILDI_00820 0.80 -0.4 157,947 + ygiQ BNILDI_00820 0.81 +0.6 157,948 - ygiQ BNILDI_00820 0.81 -0.5 157,999 - ygiQ BNILDI_00820 0.83 -1.0 158,015 + ygiQ BNILDI_00820 0.84 +0.6 158,015 + ygiQ BNILDI_00820 0.84 -0.2 158,033 - ygiQ BNILDI_00820 0.84 +0.2 158,173 + +0.4 158,174 - +0.8 158,369 - -0.4 158,404 - +3.0 158,421 + -1.6 158,421 + -0.9 158,422 - +1.0 158,422 - +0.4 158,423 + -0.7 158,423 + +0.2 158,423 + +1.0 158,424 - -0.8 158,453 - +0.7 158,459 + +0.3 158,634 + ftsP BNILDI_00825 0.10 -0.2 158,699 - ftsP BNILDI_00825 0.15 -0.5 158,782 - ftsP BNILDI_00825 0.21 -0.7 158,808 + ftsP BNILDI_00825 0.23 -1.3 158,809 - ftsP BNILDI_00825 0.23 +0.7 158,961 + ftsP BNILDI_00825 0.33 +2.0 159,049 - ftsP BNILDI_00825 0.40 +1.3 159,145 + ftsP BNILDI_00825 0.46 +0.3 159,169 + ftsP BNILDI_00825 0.48 +0.2 159,169 + ftsP BNILDI_00825 0.48 +0.4 159,170 - ftsP BNILDI_00825 0.48 +0.5
Or see this region's nucleotide sequence