Strain Fitness in Escherichia coli ECOR38 around HEPCGN_17300

Experiment: TP7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP7
2,205,184	+	yhaI	HEPCGN_17290	0.75	-1.7
2,205,290	-				-0.5
2,205,575	+	yhaH	HEPCGN_17295	0.17	+0.1
2,205,591	-	yhaH	HEPCGN_17295	0.21	+1.3
2,205,591	-	yhaH	HEPCGN_17295	0.21	-0.7
2,205,618	+	yhaH	HEPCGN_17295	0.29	-0.1
2,205,618	+	yhaH	HEPCGN_17295	0.29	+0.4
2,205,703	+	yhaH	HEPCGN_17295	0.52	-0.5
2,205,858	+				-1.2
2,205,911	+				+1.0
2,205,956	-				-1.7
2,206,085	-				-0.6
2,206,133	+				-1.1
2,206,133	+				+1.6
2,206,134	-				+1.5
2,206,138	-				+0.1
2,206,138	-				+0.5
2,206,138	-				-0.2
2,206,141	+				-1.3
2,206,158	-				+2.7
2,206,279	-	yqjG	HEPCGN_17300	0.11	-1.2
2,206,325	+	yqjG	HEPCGN_17300	0.16	+0.2
2,206,325	+	yqjG	HEPCGN_17300	0.16	-1.1
2,206,354	-	yqjG	HEPCGN_17300	0.19	+0.1
2,206,401	-	yqjG	HEPCGN_17300	0.23	+0.8
2,206,401	-	yqjG	HEPCGN_17300	0.23	+0.6
2,206,401	-	yqjG	HEPCGN_17300	0.23	+0.2
2,206,401	-	yqjG	HEPCGN_17300	0.23	+1.8
2,206,401	-	yqjG	HEPCGN_17300	0.23	+0.9
2,206,487	-	yqjG	HEPCGN_17300	0.32	-0.1
2,206,572	+	yqjG	HEPCGN_17300	0.41	+1.0
2,206,573	-	yqjG	HEPCGN_17300	0.41	+0.4
2,206,573	-	yqjG	HEPCGN_17300	0.41	-1.3
2,206,574	+	yqjG	HEPCGN_17300	0.41	-0.6
2,206,575	-	yqjG	HEPCGN_17300	0.41	+0.9
2,206,575	-	yqjG	HEPCGN_17300	0.41	+0.9
2,206,611	+	yqjG	HEPCGN_17300	0.45	+0.7
2,206,649	+	yqjG	HEPCGN_17300	0.48	+0.6
2,206,686	+	yqjG	HEPCGN_17300	0.52	+0.2
2,206,809	-	yqjG	HEPCGN_17300	0.65	+0.7
2,206,826	+	yqjG	HEPCGN_17300	0.66	+1.5
2,206,826	+	yqjG	HEPCGN_17300	0.66	-0.9
2,206,915	-	yqjG	HEPCGN_17300	0.75	-0.7
2,207,173	+				+0.5
2,207,216	-				-0.5
2,207,228	+				+1.0
2,207,259	+				-0.7
2,207,259	+				+0.5
2,207,260	-				-0.4
2,207,261	+				-0.4
2,207,481	+	yqjF	HEPCGN_17305	0.53	-0.6
2,207,482	-	yqjF	HEPCGN_17305	0.53	-1.4
2,207,510	+	yqjF	HEPCGN_17305	0.59	+0.0
2,207,510	+	yqjF	HEPCGN_17305	0.59	-0.8
2,207,511	-	yqjF	HEPCGN_17305	0.59	-0.2
2,207,576	-	yqjF	HEPCGN_17305	0.72	+1.9
2,207,680	-				+0.3
2,207,680	-				-0.3
2,207,900	+	yqjK	HEPCGN_17310	0.32	+0.4
2,207,900	+	yqjK	HEPCGN_17310	0.32	-0.4
2,207,901	-	yqjK	HEPCGN_17310	0.32	-1.8
2,207,964	+	yqjK	HEPCGN_17310	0.53	+0.0
2,207,964	+	yqjK	HEPCGN_17310	0.53	+1.1
2,207,973	-	yqjK	HEPCGN_17310	0.56	+0.2
2,207,973	-	yqjK	HEPCGN_17310	0.56	+0.7
2,207,989	+	yqjK	HEPCGN_17310	0.61	+0.7
2,208,074	+	yqjK	HEPCGN_17310	0.90	-0.3
2,208,075	-				+0.7