Strain Fitness in Escherichia coli ECOR38 around HEPCGN_08585

Experiment: TP7

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntlpxC and ftsZ are separated by 100 nucleotidesftsZ and ftsA are separated by 61 nucleotides HEPCGN_08580: lpxC - UDP-3-O-acyl-N-acetylglucosamine deacetylase, at 454,921 to 455,838 lpxC HEPCGN_08585: ftsZ - cell division protein FtsZ, at 455,939 to 457,090 ftsZ HEPCGN_08595: ftsA - cell division protein FtsA, at 457,152 to 458,414 ftsA Position (kb) 455 456 457 458Strain fitness (log2 ratio) -3 -2 -1 0 1at 455.858 kb on - strandat 455.880 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction TP7
remove
455,858 - -2.7
455,880 - -3.1

Or see this region's nucleotide sequence