Strain Fitness in Escherichia coli ECOR38 around HEPCGN_03215

Experiment: TP7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP7
553,695	+	hisB	HEPCGN_03210	0.14	-2.9
553,696	-	hisB	HEPCGN_03210	0.14	-1.4
553,759	+	hisB	HEPCGN_03210	0.20	+0.3
553,771	+	hisB	HEPCGN_03210	0.21	-0.5
553,798	+	hisB	HEPCGN_03210	0.24	+0.0
553,880	+	hisB	HEPCGN_03210	0.31	-1.4
553,941	+	hisB	HEPCGN_03210	0.37	-0.4
553,942	-	hisB	HEPCGN_03210	0.37	-1.1
554,103	-	hisB	HEPCGN_03210	0.52	-0.2
554,238	+	hisB	HEPCGN_03210	0.65	-1.2
554,239	-	hisB	HEPCGN_03210	0.65	+0.3
554,245	+	hisB	HEPCGN_03210	0.65	+2.4
554,302	+	hisB	HEPCGN_03210	0.71	-1.4
554,473	-	hisB	HEPCGN_03210	0.87	+1.1
554,496	-	hisB	HEPCGN_03210	0.89	+1.0
554,593	+				-0.3
554,616	-				-0.1
554,616	-				+1.9
554,722	+	hisC	HEPCGN_03215	0.10	-0.8
554,727	+	hisC	HEPCGN_03215	0.11	+0.9
554,789	+	hisC	HEPCGN_03215	0.16	-0.3
554,790	-	hisC	HEPCGN_03215	0.16	-2.2
554,853	-	hisC	HEPCGN_03215	0.22	-0.6
555,125	+	hisC	HEPCGN_03215	0.48	+1.0
555,126	-	hisC	HEPCGN_03215	0.48	-2.9
555,233	+	hisC	HEPCGN_03215	0.58	-0.1
555,233	+	hisC	HEPCGN_03215	0.58	-2.2
555,348	-	hisC	HEPCGN_03215	0.69	-1.7
555,424	-	hisC	HEPCGN_03215	0.76	-0.2
555,467	-	hisC	HEPCGN_03215	0.80	-0.5
555,476	+	hisC	HEPCGN_03215	0.80	-1.2
555,486	-	hisC	HEPCGN_03215	0.81	+0.6
555,544	-	hisC	HEPCGN_03215	0.87	+1.3
555,669	+				+0.7
555,670	-				+1.5
555,704	+				+0.9
555,793	-				-0.1
555,865	+	hisD	HEPCGN_03220	0.14	-1.1
555,871	+	hisD	HEPCGN_03220	0.15	-0.3
556,292	+	hisD	HEPCGN_03220	0.47	+0.4
556,323	+	hisD	HEPCGN_03220	0.49	-1.4
556,598	-	hisD	HEPCGN_03220	0.70	+1.5
556,598	-	hisD	HEPCGN_03220	0.70	+1.0
556,598	-	hisD	HEPCGN_03220	0.70	+0.8
556,615	-	hisD	HEPCGN_03220	0.72	+0.8
556,641	+	hisD	HEPCGN_03220	0.74	+0.3
556,659	+	hisD	HEPCGN_03220	0.75	+0.9
556,659	+	hisD	HEPCGN_03220	0.75	+2.9