Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21760

Experiment: Experiment:TE, Melon 5 Main Stem (TE-S-M5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Main Stem (TE-S-M5-MS)
4,160,110	-		LU632_RS21755	0.38	-3.4
4,160,129	+		LU632_RS21755	0.39	-3.7
4,160,129	+		LU632_RS21755	0.39	-2.9
4,160,129	+		LU632_RS21755	0.39	-2.7
4,160,129	+		LU632_RS21755	0.39	-3.5
4,160,130	-		LU632_RS21755	0.39	-2.4
4,160,130	-		LU632_RS21755	0.39	-5.9
4,160,130	-		LU632_RS21755	0.39	-1.1
4,160,131	+		LU632_RS21755	0.39	-1.9
4,160,131	+		LU632_RS21755	0.39	-2.6
4,160,131	+		LU632_RS21755	0.39	-1.2
4,160,131	+		LU632_RS21755	0.39	-4.0
4,160,131	+		LU632_RS21755	0.39	-3.7
4,160,132	-		LU632_RS21755	0.39	-4.4
4,160,132	-		LU632_RS21755	0.39	-0.2
4,160,132	-		LU632_RS21755	0.39	-1.4
4,160,132	-		LU632_RS21755	0.39	-4.1
4,160,134	-		LU632_RS21755	0.40	-4.6
4,160,134	-		LU632_RS21755	0.40	-4.2
4,160,134	-		LU632_RS21755	0.40	-5.6
4,160,134	-		LU632_RS21755	0.40	-2.2
4,160,134	-		LU632_RS21755	0.40	-3.0
4,160,134	-		LU632_RS21755	0.40	-1.7
4,160,186	-		LU632_RS21755	0.44	-3.9
4,160,188	+		LU632_RS21755	0.44	-3.4
4,160,191	+		LU632_RS21755	0.44	+0.0
4,160,191	+		LU632_RS21755	0.44	-2.9
4,160,192	-		LU632_RS21755	0.44	-5.0
4,160,192	-		LU632_RS21755	0.44	-4.6
4,160,206	-		LU632_RS21755	0.45	-3.1
4,160,212	-		LU632_RS21755	0.46	+0.0
4,160,317	+		LU632_RS21755	0.54	-2.6
4,160,368	-		LU632_RS21755	0.58	-2.5
4,160,636	+		LU632_RS21755	0.78	-1.9
4,160,753	+		LU632_RS21755	0.87	-4.0
4,160,753	+		LU632_RS21755	0.87	-1.5
4,160,753	+		LU632_RS21755	0.87	-4.0
4,160,754	-		LU632_RS21755	0.87	-1.7
4,160,754	-		LU632_RS21755	0.87	-2.9
4,160,830	-				-5.0
4,160,952	+				-2.2
4,160,988	+				-3.1
4,161,074	+		LU632_RS21760	0.15	+0.5
4,161,074	+		LU632_RS21760	0.15	+0.3
4,161,074	+		LU632_RS21760	0.15	-0.3
4,161,075	-		LU632_RS21760	0.16	+1.3
4,161,075	-		LU632_RS21760	0.16	-1.2
4,161,075	-		LU632_RS21760	0.16	+0.1
4,161,082	-		LU632_RS21760	0.19	-2.1
4,161,214	+		LU632_RS21760	0.84	+0.9
4,161,214	+		LU632_RS21760	0.84	-0.4
4,161,232	+				+0.6
4,161,232	+				-1.0
4,161,234	+				-1.2
4,161,234	+				-0.5
4,161,234	+				-1.2
4,161,234	+				+1.1
4,161,234	+				-1.7
4,161,235	-				-0.3
4,161,235	-				-0.8
4,161,444	-				+0.3
4,161,477	+				+1.1
4,161,477	+				-1.7
4,161,636	+				+0.7
4,161,672	+				-3.4
4,161,953	-		LU632_RS21765	0.72	+0.4
4,161,966	-		LU632_RS21765	0.77	-0.9
4,162,069	+		LU632_RS21770	0.26	+2.3