Strain Fitness in Escherichia coli ECOR38 around HEPCGN_17760

Experiment: TP7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP7
2,294,939	-				+1.1
2,294,939	-				-0.5
2,294,939	-				+0.5
2,294,945	+				-0.9
2,295,009	+	ygiV	HEPCGN_17750	0.19	+1.5
2,295,039	-	ygiV	HEPCGN_17750	0.25	-0.9
2,295,211	-	ygiV	HEPCGN_17750	0.61	+0.2
2,295,254	+	ygiV	HEPCGN_17750	0.70	-0.7
2,295,254	+	ygiV	HEPCGN_17750	0.70	+0.3
2,295,308	+	ygiV	HEPCGN_17750	0.81	-0.8
2,295,381	+				-0.4
2,295,381	+				-0.4
2,295,422	-				-0.0
2,295,448	+				+0.1
2,295,449	-				+0.4
2,295,467	-				+0.1
2,295,519	-				-0.1
2,295,524	+				-2.6
2,295,536	+				-0.4
2,295,537	-				-1.2
2,295,579	+				-0.2
2,295,584	+				+0.7
2,295,623	+				-0.6
2,295,623	+				+1.2
2,295,623	+				+1.4
2,295,624	-				-0.1
2,295,624	-				+1.2
2,295,624	-				-2.2
2,295,624	-				-0.1
2,295,680	+	mqsR	HEPCGN_17755	0.26	+0.0
2,295,680	+	mqsR	HEPCGN_17755	0.26	+0.3
2,295,681	-	mqsR	HEPCGN_17755	0.26	+2.2
2,295,725	+	mqsR	HEPCGN_17755	0.41	-0.7
2,295,726	-	mqsR	HEPCGN_17755	0.41	+1.5
2,295,726	-	mqsR	HEPCGN_17755	0.41	-0.2
2,295,731	+	mqsR	HEPCGN_17755	0.43	-0.5
2,295,731	+	mqsR	HEPCGN_17755	0.43	+0.5
2,295,732	-	mqsR	HEPCGN_17755	0.43	-0.8
2,295,732	-	mqsR	HEPCGN_17755	0.43	-0.8
2,295,767	+	mqsR	HEPCGN_17755	0.55	+0.6
2,295,783	+	mqsR	HEPCGN_17755	0.61	+0.1
2,295,795	-	mqsR	HEPCGN_17755	0.65	-0.4
2,295,795	-	mqsR	HEPCGN_17755	0.65	+1.3
2,295,797	+	mqsR	HEPCGN_17755	0.65	-1.1
2,295,814	-	mqsR	HEPCGN_17755	0.71	+0.9
2,295,831	-	mqsR	HEPCGN_17755	0.77	+0.4
2,295,871	+				-0.3
2,296,187	+	mqsA	HEPCGN_17760	0.72	+0.4
2,296,187	+	mqsA	HEPCGN_17760	0.72	+1.2
2,296,187	+	mqsA	HEPCGN_17760	0.72	+0.9
2,296,277	+				-0.4
2,296,299	-				+1.1
2,296,407	-				+1.1
2,296,426	-				+0.8
2,296,426	-				+0.3
2,296,432	+				-0.4
2,296,448	+				-1.1
2,296,466	+				+1.5
2,296,466	+				-0.0
2,296,467	-				-0.3
2,296,483	+				+0.6
2,296,484	-				+0.6
2,296,537	+				-0.7
2,296,708	-	ygiS	HEPCGN_17765	0.17	-1.1
2,296,860	+	ygiS	HEPCGN_17765	0.27	-0.0
2,296,860	+	ygiS	HEPCGN_17765	0.27	-1.8
2,296,861	-	ygiS	HEPCGN_17765	0.27	-0.5
2,296,873	-	ygiS	HEPCGN_17765	0.28	-0.3
2,296,884	+	ygiS	HEPCGN_17765	0.28	-0.5
2,296,917	+	ygiS	HEPCGN_17765	0.30	+0.8
2,296,929	+	ygiS	HEPCGN_17765	0.31	+0.3
2,297,032	-	ygiS	HEPCGN_17765	0.38	-0.7
2,297,051	-	ygiS	HEPCGN_17765	0.39	-0.2
2,297,081	+	ygiS	HEPCGN_17765	0.41	+1.0
2,297,081	+	ygiS	HEPCGN_17765	0.41	+1.2
2,297,119	+	ygiS	HEPCGN_17765	0.43	+2.2
2,297,136	+	ygiS	HEPCGN_17765	0.44	+0.5
2,297,137	-	ygiS	HEPCGN_17765	0.44	-0.0
2,297,141	+	ygiS	HEPCGN_17765	0.44	+0.2
2,297,158	+	ygiS	HEPCGN_17765	0.45	+1.2
2,297,277	-	ygiS	HEPCGN_17765	0.53	-0.6