Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25290

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
4,808,039	-				-0.1
4,808,039	-				-0.5
4,808,039	-				+1.2
4,808,039	-				+0.2
4,808,081	-				+0.2
4,808,081	-				+0.0
4,808,103	+				+1.5
4,808,104	-				-2.1
4,808,104	-				+0.3
4,808,104	-				-0.5
4,808,107	+				-0.0
4,808,107	+				-0.2
4,808,107	+				+0.7
4,808,107	+				+0.5
4,808,298	+	gspS	LU632_RS25280	0.37	+0.2
4,808,421	-	gspS	LU632_RS25280	0.78	+2.6
4,808,421	-	gspS	LU632_RS25280	0.78	-2.9
4,808,421	-	gspS	LU632_RS25280	0.78	-2.2
4,808,421	-	gspS	LU632_RS25280	0.78	+0.3
4,808,443	-	gspS	LU632_RS25280	0.85	+1.8
4,808,540	+		LU632_RS25285	0.17	+1.0
4,808,540	+		LU632_RS25285	0.17	+2.4
4,808,608	-		LU632_RS25285	0.44	-0.2
4,808,608	-		LU632_RS25285	0.44	+0.2
4,808,744	-				+1.2
4,808,746	+				+2.2
4,808,746	+				+1.8
4,808,747	-				+1.2
4,808,750	-				+3.5
4,808,767	+				+0.6
4,808,767	+				-0.8
4,808,768	-				+0.1
4,808,775	+				+2.1
4,808,776	-				-1.0
4,808,808	+				-0.0
4,808,808	+				+0.4
4,808,812	+				-0.8
4,808,812	+				+0.9
4,808,813	-				+0.9
4,808,813	-				-1.1
4,808,875	-				-0.7
4,808,875	-				-1.4
4,808,879	+				+0.2
4,808,879	+				+0.1
4,808,879	+				+0.6
4,808,880	-				+0.6
4,808,882	-				+1.8
4,808,882	-				-1.5
4,808,888	+				-1.2
4,808,888	+				+0.8
4,809,041	-		LU632_RS25290	0.21	-1.9
4,809,063	+		LU632_RS25290	0.25	+1.1
4,809,096	-		LU632_RS25290	0.32	+1.3
4,809,120	+		LU632_RS25290	0.36	-0.9
4,809,120	+		LU632_RS25290	0.36	-1.0
4,809,121	-		LU632_RS25290	0.36	-1.1
4,809,224	+		LU632_RS25290	0.56	-0.7
4,809,224	+		LU632_RS25290	0.56	+2.7
4,809,225	-		LU632_RS25290	0.56	+1.6
4,809,327	+		LU632_RS25290	0.76	-0.1
4,809,327	-		LU632_RS25290	0.76	-1.2
4,809,386	-		LU632_RS25290	0.87	+1.1
4,809,386	-		LU632_RS25290	0.87	+0.2
4,809,389	-		LU632_RS25290	0.88	+0.9
4,809,412	-				-0.2
4,809,414	-				-1.7
4,809,414	-				-0.2
4,809,414	-				-0.5
4,809,488	+				+0.9
4,809,545	+				-2.5
4,809,548	+				+0.4
4,809,674	-				+0.9
4,809,674	-				-0.4
4,809,744	-				+2.3
4,809,762	+				+0.8
4,809,774	-				-0.7
4,809,800	-				-1.4
4,809,808	+				+2.7
4,809,809	-				-0.2
4,809,810	+				+1.0
4,809,811	-				-1.7
4,809,812	+				+0.3
4,809,812	+				+0.4
4,809,813	-				-0.2
4,809,813	-				-0.2
4,809,891	-				-1.0
4,809,891	-				-2.6