Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23180

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
4,416,646	+				+0.3
4,416,646	+				+0.7
4,416,652	+				+0.1
4,416,707	-				+0.8
4,416,826	+				+1.8
4,416,854	+				-3.2
4,416,855	-				-1.9
4,416,879	+				+0.7
4,416,880	-				+1.2
4,416,941	+				+0.5
4,416,966	+				+0.1
4,416,998	-				+1.1
4,416,998	-				+0.9
4,417,034	-				+2.2
4,417,044	+				+1.6
4,417,046	+				+0.6
4,417,046	+				-1.0
4,417,046	+				-0.2
4,417,047	-				+0.2
4,417,047	-				+0.3
4,417,047	-				+2.3
4,417,111	+				+1.8
4,417,112	-				+0.4
4,417,139	-				+0.2
4,417,146	-				+1.6
4,417,164	-				-3.4
4,417,207	-				-0.9
4,417,303	+		LU632_RS23175	0.10	-0.8
4,417,303	+		LU632_RS23175	0.10	-1.3
4,417,303	+		LU632_RS23175	0.10	-0.2
4,417,303	+		LU632_RS23175	0.10	-0.2
4,417,303	+		LU632_RS23175	0.10	+0.8
4,417,304	-		LU632_RS23175	0.10	-0.0
4,417,304	-		LU632_RS23175	0.10	-3.3
4,417,304	-		LU632_RS23175	0.10	-0.0
4,417,304	-		LU632_RS23175	0.10	+0.2
4,417,304	-		LU632_RS23175	0.10	+0.2
4,417,392	-		LU632_RS23175	0.43	-0.8
4,417,648	-		LU632_RS23180	0.19	-2.0
4,417,691	+		LU632_RS23180	0.66	-0.8
4,417,691	+		LU632_RS23180	0.66	+0.9
4,417,752	+				+0.5
4,417,752	+				-0.3
4,417,849	+				+3.4
4,417,862	+				-2.2