Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22025

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
4,204,312	+				-5.0
4,204,312	+				-1.4
4,204,578	+	rph	LU632_RS22020	0.37	-4.6
4,204,579	-	rph	LU632_RS22020	0.37	+1.4
4,204,579	-	rph	LU632_RS22020	0.37	+0.2
4,204,583	+	rph	LU632_RS22020	0.38	-4.8
4,204,584	-	rph	LU632_RS22020	0.38	+2.1
4,204,584	-	rph	LU632_RS22020	0.38	+0.2
4,204,694	+	rph	LU632_RS22020	0.53	-1.8
4,204,694	+	rph	LU632_RS22020	0.53	-5.7
4,204,694	+	rph	LU632_RS22020	0.53	-2.1
4,204,695	-	rph	LU632_RS22020	0.54	-2.3
4,204,835	+	rph	LU632_RS22020	0.73	-0.5
4,204,835	+	rph	LU632_RS22020	0.73	-3.5
4,204,836	-	rph	LU632_RS22020	0.73	+0.6
4,204,836	-	rph	LU632_RS22020	0.73	+0.4
4,204,836	-	rph	LU632_RS22020	0.73	-0.6
4,204,836	-	rph	LU632_RS22020	0.73	+1.4
4,204,836	-	rph	LU632_RS22020	0.73	-0.4
4,204,836	-	rph	LU632_RS22020	0.73	+0.4
4,204,841	-	rph	LU632_RS22020	0.74	-0.6
4,204,969	+				-3.8
4,205,054	+				-2.9
4,205,070	+				-0.2
4,205,101	+				+0.3
4,205,102	-				+0.4
4,205,104	+				-0.9
4,205,104	+				-1.9
4,205,104	+				-0.1
4,205,160	+		LU632_RS22025	0.31	-1.5
4,205,161	-		LU632_RS22025	0.32	+0.2
4,205,161	-		LU632_RS22025	0.32	-0.4
4,205,161	-		LU632_RS22025	0.32	+2.1
4,205,253	-		LU632_RS22025	0.70	-2.3
4,205,327	-				-1.3
4,205,373	-				+0.2
4,205,396	+				-1.4
4,205,397	-				+0.1
4,205,397	-				-1.7
4,205,399	-				+0.8
4,205,399	-				+0.8
4,205,399	-				+3.6
4,205,399	-				+0.4
4,205,425	-				+0.2
4,205,495	-				+1.8
4,205,495	-				-1.5
4,205,496	+				-0.9
4,205,497	-				+0.4
4,205,612	-		LU632_RS22030	0.14	-0.9
4,205,662	-		LU632_RS22030	0.18	+0.6
4,205,674	+		LU632_RS22030	0.20	-0.1
4,205,675	-		LU632_RS22030	0.20	-1.6
4,205,691	+		LU632_RS22030	0.21	-0.1
4,205,723	-		LU632_RS22030	0.24	+0.6
4,205,754	+		LU632_RS22030	0.27	+0.4
4,205,780	+		LU632_RS22030	0.29	+0.8
4,205,794	+		LU632_RS22030	0.30	-0.0
4,205,795	-		LU632_RS22030	0.31	+2.3
4,205,796	+		LU632_RS22030	0.31	+0.5
4,205,796	+		LU632_RS22030	0.31	+0.7
4,205,796	+		LU632_RS22030	0.31	-2.9
4,205,797	-		LU632_RS22030	0.31	-0.3
4,205,859	+		LU632_RS22030	0.36	-2.6
4,205,876	-		LU632_RS22030	0.38	+1.4
4,205,891	+		LU632_RS22030	0.39	+0.5
4,205,892	-		LU632_RS22030	0.39	-0.4
4,206,050	+		LU632_RS22030	0.54	-1.9
4,206,058	-		LU632_RS22030	0.55	-0.9
4,206,087	+		LU632_RS22030	0.57	-0.2
4,206,289	+		LU632_RS22030	0.76	-1.1
4,206,290	-		LU632_RS22030	0.76	-0.8
4,206,306	+		LU632_RS22030	0.77	-1.0
4,206,307	-		LU632_RS22030	0.77	+0.2