Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21660

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
4,140,412	+				+0.4
4,140,420	+				+1.4
4,140,469	+				-0.3
4,140,513	-				-1.5
4,140,513	-				-2.0
4,140,515	-				+1.0
4,140,613	-				+0.2
4,140,631	+				+0.0
4,140,632	-				-0.9
4,140,632	-				-3.4
4,140,650	+				-0.3
4,140,651	-				-0.6
4,140,986	+				+2.2
4,140,986	+				+0.8
4,140,989	+				-1.8
4,140,990	-				+0.3
4,141,134	-	ampH	LU632_RS21660	0.13	+1.8
4,141,139	+	ampH	LU632_RS21660	0.14	+0.3
4,141,139	+	ampH	LU632_RS21660	0.14	+0.5
4,141,139	+	ampH	LU632_RS21660	0.14	+0.7
4,141,140	-	ampH	LU632_RS21660	0.14	-0.1
4,141,140	-	ampH	LU632_RS21660	0.14	+0.7
4,141,140	-	ampH	LU632_RS21660	0.14	-0.9
4,141,140	-	ampH	LU632_RS21660	0.14	-0.0
4,141,140	-	ampH	LU632_RS21660	0.14	-0.2
4,141,140	-	ampH	LU632_RS21660	0.14	+0.7
4,141,140	-	ampH	LU632_RS21660	0.14	+0.1
4,141,140	-	ampH	LU632_RS21660	0.14	+0.1
4,141,141	+	ampH	LU632_RS21660	0.14	-0.8
4,141,141	+	ampH	LU632_RS21660	0.14	+1.8
4,141,141	+	ampH	LU632_RS21660	0.14	+0.3
4,141,141	+	ampH	LU632_RS21660	0.14	-1.6
4,141,141	+	ampH	LU632_RS21660	0.14	-0.8
4,141,141	+	ampH	LU632_RS21660	0.14	+0.4
4,141,142	-	ampH	LU632_RS21660	0.14	+0.8
4,141,142	-	ampH	LU632_RS21660	0.14	+1.2
4,141,142	-	ampH	LU632_RS21660	0.14	+0.3
4,141,142	-	ampH	LU632_RS21660	0.14	+0.3
4,141,142	-	ampH	LU632_RS21660	0.14	-2.2
4,141,142	-	ampH	LU632_RS21660	0.14	+1.0
4,141,142	-	ampH	LU632_RS21660	0.14	-2.4
4,141,142	-	ampH	LU632_RS21660	0.14	+0.6
4,141,178	+	ampH	LU632_RS21660	0.17	-1.2
4,141,211	-	ampH	LU632_RS21660	0.20	-0.9
4,141,387	+	ampH	LU632_RS21660	0.35	-0.2
4,141,388	-	ampH	LU632_RS21660	0.35	+0.5
4,141,422	+	ampH	LU632_RS21660	0.37	-1.0
4,141,424	+	ampH	LU632_RS21660	0.38	+0.6
4,141,425	-	ampH	LU632_RS21660	0.38	+3.1
4,141,518	+	ampH	LU632_RS21660	0.45	-0.8
4,141,518	+	ampH	LU632_RS21660	0.45	-0.3
4,141,561	+	ampH	LU632_RS21660	0.49	+1.0
4,141,753	-	ampH	LU632_RS21660	0.65	-2.0
4,141,753	-	ampH	LU632_RS21660	0.65	+1.1
4,141,777	+	ampH	LU632_RS21660	0.67	+1.8
4,141,790	+	ampH	LU632_RS21660	0.68	+0.0
4,141,790	+	ampH	LU632_RS21660	0.68	+2.1
4,141,807	+	ampH	LU632_RS21660	0.70	+1.4
4,141,808	-	ampH	LU632_RS21660	0.70	-0.4
4,141,828	-	ampH	LU632_RS21660	0.71	+1.1
4,141,944	+	ampH	LU632_RS21660	0.81	-3.0
4,142,130	+				+0.4
4,142,186	+				-3.1
4,142,193	-				-1.2
4,142,195	-				-3.3
4,142,197	+				-0.4
4,142,197	+				+0.7
4,142,197	+				+1.5
4,142,198	-				+0.1
4,142,198	-				+1.8
4,142,207	+				+0.4
4,142,207	+				+1.0
4,142,263	-				+1.3
4,142,264	+				+0.9
4,142,281	+				+1.2
4,142,282	-				+1.6
4,142,282	-				+0.8
4,142,377	-				+1.0
4,142,415	+				+0.2
4,142,416	-				-1.4
4,142,416	-				+0.8
4,142,449	-				-0.1
4,142,599	-				-0.7
4,142,709	+		LU632_RS21665	0.14	+1.8
4,142,919	+		LU632_RS21665	0.28	+0.5
4,142,986	-		LU632_RS21665	0.32	-1.5
4,143,100	+		LU632_RS21665	0.39	-0.7
4,143,166	-		LU632_RS21665	0.44	+0.5