Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19090

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
3,602,053	+		LU632_RS19085	0.14	-0.1
3,602,054	-		LU632_RS19085	0.14	-1.2
3,602,094	+		LU632_RS19085	0.18	+0.4
3,602,181	-		LU632_RS19085	0.26	-2.8
3,602,197	+		LU632_RS19085	0.27	+0.4
3,602,240	+		LU632_RS19085	0.32	+2.4
3,602,488	+		LU632_RS19085	0.55	-1.9
3,602,653	+		LU632_RS19085	0.71	-1.5
3,602,653	+		LU632_RS19085	0.71	-0.3
3,602,698	-		LU632_RS19085	0.76	-2.2
3,602,740	-		LU632_RS19085	0.80	-2.3
3,602,740	-		LU632_RS19085	0.80	-0.1
3,602,845	+		LU632_RS19085	0.90	-3.9
3,602,845	+		LU632_RS19085	0.90	-3.4
3,602,886	+				+0.7
3,603,035	-				-0.9
3,603,057	+		LU632_RS19090	0.14	+1.9
3,603,080	+		LU632_RS19090	0.24	+0.3
3,603,080	+		LU632_RS19090	0.24	-0.3
3,603,081	-		LU632_RS19090	0.25	-3.2
3,603,082	+		LU632_RS19090	0.25	-0.0
3,603,082	+		LU632_RS19090	0.25	-1.9
3,603,091	-		LU632_RS19090	0.29	-2.3
3,603,144	+		LU632_RS19090	0.52	+0.1
3,603,145	-		LU632_RS19090	0.53	+0.3
3,603,292	+				-1.7
3,603,371	+				+1.2
3,603,426	-		LU632_RS19095	0.18	+1.2
3,603,544	+		LU632_RS19095	0.38	+0.1
3,603,576	-		LU632_RS19095	0.44	+0.1
3,603,906	+				-0.6
3,603,930	-				-0.9
3,603,936	+				-1.2
3,603,957	-				-0.8
3,604,000	-				+0.3