Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17575

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
3,300,168	+		LU632_RS17570	0.11	-0.7
3,300,232	+		LU632_RS17570	0.17	-0.7
3,300,233	-		LU632_RS17570	0.17	+0.2
3,300,369	-		LU632_RS17570	0.30	+0.3
3,300,478	+		LU632_RS17570	0.40	-0.9
3,300,478	+		LU632_RS17570	0.40	+3.1
3,300,519	+		LU632_RS17570	0.43	-0.1
3,300,541	+		LU632_RS17570	0.45	+0.8
3,300,542	-		LU632_RS17570	0.45	-0.8
3,300,542	-		LU632_RS17570	0.45	+1.9
3,300,562	+		LU632_RS17570	0.47	+0.4
3,300,615	+		LU632_RS17570	0.52	-1.2
3,300,816	-		LU632_RS17570	0.71	-1.1
3,300,859	-		LU632_RS17570	0.74	-0.0
3,300,874	-		LU632_RS17570	0.76	-0.6
3,300,961	-		LU632_RS17570	0.84	+0.7
3,301,043	+				+2.0
3,301,045	+				+1.1
3,301,046	-				+0.9
3,301,046	-				-1.3
3,301,046	-				+0.7
3,301,088	-				+1.5
3,301,090	+				-2.2
3,301,090	+				-0.4
3,301,090	+				-0.5
3,301,090	+				-0.1
3,301,091	-				+0.5
3,301,094	+				+0.7
3,301,094	+				+0.5
3,301,094	+				-0.5
3,301,095	-				-2.8
3,301,096	+				-1.8
3,301,218	-				-0.4
3,301,244	+		LU632_RS17575	0.11	-1.9
3,301,276	+		LU632_RS17575	0.14	+0.8
3,301,277	-		LU632_RS17575	0.14	-1.2
3,301,306	-		LU632_RS17575	0.17	+0.1
3,301,308	+		LU632_RS17575	0.17	-1.6
3,301,309	-		LU632_RS17575	0.17	-2.6
3,301,309	-		LU632_RS17575	0.17	-0.3
3,301,313	-		LU632_RS17575	0.18	+1.3
3,301,384	-		LU632_RS17575	0.24	+2.5
3,301,384	-		LU632_RS17575	0.24	-0.7
3,301,384	-		LU632_RS17575	0.24	-1.6
3,301,440	+		LU632_RS17575	0.30	+1.2
3,301,441	-		LU632_RS17575	0.30	-1.2
3,301,446	+		LU632_RS17575	0.31	+0.7
3,301,447	-		LU632_RS17575	0.31	-0.9
3,301,549	-		LU632_RS17575	0.41	+0.9
3,301,549	-		LU632_RS17575	0.41	+0.3
3,301,826	-		LU632_RS17575	0.68	+0.1
3,301,870	-		LU632_RS17575	0.72	+0.7
3,301,915	+		LU632_RS17575	0.77	+0.1
3,301,941	+		LU632_RS17575	0.79	-0.1
3,301,942	-		LU632_RS17575	0.79	-0.4
3,301,942	-		LU632_RS17575	0.79	-1.9
3,301,945	-		LU632_RS17575	0.80	+0.2
3,301,945	-		LU632_RS17575	0.80	+0.1
3,301,947	+		LU632_RS17575	0.80	+0.5
3,301,947	+		LU632_RS17575	0.80	+1.7
3,301,948	-		LU632_RS17575	0.80	+1.1
3,301,948	-		LU632_RS17575	0.80	-0.1
3,301,948	-		LU632_RS17575	0.80	-1.5
3,302,013	-		LU632_RS17575	0.86	+1.2
3,302,013	-		LU632_RS17575	0.86	+0.8
3,302,013	-		LU632_RS17575	0.86	-1.6
3,302,013	-		LU632_RS17575	0.86	-1.2
3,302,019	-		LU632_RS17575	0.87	+1.2
3,302,032	-		LU632_RS17575	0.88	-0.6
3,302,076	-				-1.5
3,302,144	+				+0.6
3,302,144	+				+0.3
3,302,145	-				-1.2
3,302,145	-				+0.5
3,302,145	-				-0.1
3,302,146	+				-0.1
3,302,146	+				+0.0
3,302,146	+				+1.9
3,302,147	-				-0.6
3,302,147	-				+0.1
3,302,147	-				-0.2
3,302,147	-				-1.6
3,302,215	+				+0.6
3,302,396	+	yejF	LU632_RS17580	0.15	+0.0
3,302,396	+	yejF	LU632_RS17580	0.15	+0.3
3,302,396	+	yejF	LU632_RS17580	0.15	-1.0
3,302,424	-	yejF	LU632_RS17580	0.17	-0.4
3,302,459	+	yejF	LU632_RS17580	0.19	+0.5
3,302,697	-	yejF	LU632_RS17580	0.34	+0.2
3,302,765	+	yejF	LU632_RS17580	0.39	+0.3
3,302,819	+	yejF	LU632_RS17580	0.42	+0.9
3,302,820	-	yejF	LU632_RS17580	0.42	-0.3
3,302,898	+	yejF	LU632_RS17580	0.47	-0.2
3,302,899	-	yejF	LU632_RS17580	0.47	-1.1
3,302,995	-	yejF	LU632_RS17580	0.53	-2.0
3,303,098	-	yejF	LU632_RS17580	0.60	-0.6
3,303,149	-	yejF	LU632_RS17580	0.63	-0.4