Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16760

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
3,156,292	-		LU632_RS16755	0.20	-1.8
3,156,295	+		LU632_RS16755	0.20	-2.1
3,156,317	+		LU632_RS16755	0.24	+1.9
3,156,318	-		LU632_RS16755	0.24	-2.9
3,156,390	+		LU632_RS16755	0.37	-1.4
3,156,391	-		LU632_RS16755	0.37	-0.5
3,156,417	+		LU632_RS16755	0.42	+1.2
3,156,418	-		LU632_RS16755	0.42	+0.5
3,156,797	+				-1.7
3,156,812	-				-0.1
3,156,832	-				+0.1
3,156,869	-				+0.2
3,156,906	-				-0.5
3,156,906	-				+0.5
3,156,933	-				-1.8
3,156,974	+				-1.8
3,156,989	-				+0.2
3,157,013	+				+0.5
3,157,019	-				-0.4
3,157,023	-				-0.6
3,157,035	+				-1.2
3,157,136	+				+0.6
3,157,143	+				+0.3
3,157,144	-				+0.6
3,157,161	+				+1.0
3,157,162	-				+0.9
3,157,195	+				-0.3
3,157,196	-				+0.5
3,157,202	+				+0.5
3,157,212	+				+1.3
3,157,250	-				-0.5
3,157,548	+		LU632_RS16760	0.70	-2.3
3,157,548	+		LU632_RS16760	0.70	-2.2
3,157,555	+		LU632_RS16760	0.72	-1.0
3,157,712	+				+0.9
3,157,712	+				-0.5
3,157,713	-				+0.4
3,157,713	-				+0.3
3,157,713	-				+0.1
3,157,747	+				-1.7
3,157,748	-				+1.4
3,157,786	-				+0.1
3,157,786	-				+2.2
3,157,812	-				-0.5
3,157,882	+				-2.1
3,157,932	-				-1.0
3,157,960	-				-0.1