Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14040

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
2,696,049	+				+0.1
2,696,049	+				-0.7
2,696,059	+				+0.7
2,696,059	+				-0.5
2,696,059	+				-1.6
2,696,060	-				-1.3
2,696,060	-				+1.2
2,696,099	+				+1.0
2,696,238	+		LU632_RS14040	0.43	-4.2
2,696,449	+				-0.6
2,696,477	-				-0.6
2,696,506	+		LU632_RS14045	0.12	+1.2
2,696,507	-		LU632_RS14045	0.12	+0.0
2,696,623	-		LU632_RS14045	0.60	+1.0
2,696,623	-		LU632_RS14045	0.60	+1.1
2,696,895	-				-0.7
2,696,895	-				+0.9
2,696,905	-				+1.4