Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10555

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
2,015,854	+		LU632_RS10550	0.27	-2.0
2,015,854	+		LU632_RS10550	0.27	+1.3
2,015,854	+		LU632_RS10550	0.27	-0.7
2,015,854	+		LU632_RS10550	0.27	+0.0
2,015,855	-		LU632_RS10550	0.27	-3.0
2,015,855	-		LU632_RS10550	0.27	+0.1
2,015,855	-		LU632_RS10550	0.27	-1.3
2,016,205	-		LU632_RS10550	0.53	-1.3
2,016,266	-		LU632_RS10550	0.58	-2.5
2,016,374	-		LU632_RS10550	0.66	-0.4
2,016,374	-		LU632_RS10550	0.66	-0.9
2,016,453	+		LU632_RS10550	0.72	-1.1
2,016,454	-		LU632_RS10550	0.72	+1.3
2,016,493	+		LU632_RS10550	0.75	+0.7
2,016,496	+		LU632_RS10550	0.75	-2.0
2,016,526	+		LU632_RS10550	0.77	+1.3
2,016,897	+	fliJ	LU632_RS10555	0.17	-1.2
2,016,897	+	fliJ	LU632_RS10555	0.17	-0.9
2,016,898	-	fliJ	LU632_RS10555	0.17	-1.2
2,017,060	+	fliJ	LU632_RS10555	0.53	-0.2
2,017,061	-	fliJ	LU632_RS10555	0.53	-0.3
2,017,061	-	fliJ	LU632_RS10555	0.53	-1.9
2,017,097	+	fliJ	LU632_RS10555	0.62	-0.3
2,017,097	+	fliJ	LU632_RS10555	0.62	+0.1
2,017,097	+	fliJ	LU632_RS10555	0.62	+1.8
2,017,098	-	fliJ	LU632_RS10555	0.62	-0.4
2,017,098	-	fliJ	LU632_RS10555	0.62	+0.5
2,017,302	+				-0.2
2,017,420	+				-1.0
2,017,420	+				+0.6
2,017,456	+	fliI	LU632_RS10560	0.13	+1.0
2,017,475	+	fliI	LU632_RS10560	0.14	-1.2
2,017,548	-	fliI	LU632_RS10560	0.19	-0.4
2,017,598	+	fliI	LU632_RS10560	0.23	+0.2
2,017,598	+	fliI	LU632_RS10560	0.23	-1.6
2,017,598	+	fliI	LU632_RS10560	0.23	-0.7
2,017,599	-	fliI	LU632_RS10560	0.23	+1.9
2,017,599	-	fliI	LU632_RS10560	0.23	-0.8
2,017,599	-	fliI	LU632_RS10560	0.23	-0.1
2,017,599	-	fliI	LU632_RS10560	0.23	-0.2
2,017,599	-	fliI	LU632_RS10560	0.23	+1.3
2,017,671	-	fliI	LU632_RS10560	0.28	-0.3
2,017,672	+	fliI	LU632_RS10560	0.28	+0.4
2,017,672	+	fliI	LU632_RS10560	0.28	+0.3
2,017,673	-	fliI	LU632_RS10560	0.29	-2.4
2,017,895	-	fliI	LU632_RS10560	0.45	-3.2
2,017,973	+	fliI	LU632_RS10560	0.51	+1.2
2,018,001	+	fliI	LU632_RS10560	0.53	+0.1
2,018,087	+	fliI	LU632_RS10560	0.59	+2.5
2,018,208	-	fliI	LU632_RS10560	0.68	-1.1
2,018,220	-	fliI	LU632_RS10560	0.69	+0.7
2,018,220	-	fliI	LU632_RS10560	0.69	+1.6
2,018,220	-	fliI	LU632_RS10560	0.69	+0.3