Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09935

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
1,898,624	-	pepN	LU632_RS09930	0.84	-1.6
1,898,687	-	pepN	LU632_RS09930	0.86	+0.6
1,898,922	-				+1.6
1,898,942	+				-0.8
1,898,956	+				+1.7
1,899,167	+				-0.4
1,899,259	+				-0.8
1,899,259	+				+1.0
1,899,259	+				+2.4
1,899,260	-				+0.1
1,899,263	-				-0.0
1,899,263	-				-0.1
1,899,306	-				-1.5
1,899,336	-		LU632_RS09935	0.20	-0.0
1,899,370	-		LU632_RS09935	0.44	-0.4
1,899,378	+		LU632_RS09935	0.49	+0.5