Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09330

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
1,764,991	+	bglX	LU632_RS09325	0.80	-0.9
1,765,018	+	bglX	LU632_RS09325	0.81	+1.5
1,765,039	-	bglX	LU632_RS09325	0.82	-2.7
1,765,042	+	bglX	LU632_RS09325	0.82	-1.1
1,765,043	-	bglX	LU632_RS09325	0.82	+0.2
1,765,043	-	bglX	LU632_RS09325	0.82	+1.5
1,765,044	+	bglX	LU632_RS09325	0.82	-0.2
1,765,044	+	bglX	LU632_RS09325	0.82	-1.4
1,765,044	+	bglX	LU632_RS09325	0.82	+0.6
1,765,044	+	bglX	LU632_RS09325	0.82	-0.1
1,765,105	+	bglX	LU632_RS09325	0.84	-1.0
1,765,105	+	bglX	LU632_RS09325	0.84	-1.1
1,765,105	+	bglX	LU632_RS09325	0.84	+0.6
1,765,105	+	bglX	LU632_RS09325	0.84	-0.8
1,765,106	-	bglX	LU632_RS09325	0.85	-2.3
1,765,116	-	bglX	LU632_RS09325	0.85	-0.4
1,765,131	+	bglX	LU632_RS09325	0.86	-1.3
1,765,132	-	bglX	LU632_RS09325	0.86	-0.3
1,765,257	+				+1.5
1,765,296	+				-2.6
1,765,297	-				+0.2
1,765,297	-				+0.1
1,765,297	-				+1.0
1,765,338	-				-0.3
1,765,402	-				+0.6
1,765,473	+				-3.2
1,765,473	+				-1.0
1,765,474	-				+0.8
1,765,474	-				+0.7
1,765,479	+				+0.6
1,765,523	-				-0.8
1,765,523	-				-0.3
1,765,623	+				+0.2
1,765,650	+				-0.7
1,765,651	-				-0.8
1,765,651	-				-0.3
1,765,651	-				-0.3
1,765,693	+				-1.2
1,765,693	+				-0.1
1,765,694	-				+0.1
1,765,770	+				+0.2
1,765,770	+				-1.7
1,765,810	+				+0.5
1,765,810	+				+1.1
1,765,811	-				+0.4
1,765,811	-				+0.6
1,765,842	+				+2.8
1,765,843	-				+2.2
1,765,843	-				-0.9
1,765,857	+				+0.3
1,765,857	+				+0.8
1,765,899	+				+0.7
1,765,917	-				-0.1
1,765,950	+				-2.1
1,765,952	+				-0.8
1,765,952	+				+1.0
1,765,952	+				-0.5
1,766,046	+		LU632_RS09330	0.13	+0.7
1,766,111	+		LU632_RS09330	0.21	+0.2
1,766,111	+		LU632_RS09330	0.21	+0.2
1,766,283	-		LU632_RS09330	0.41	+1.5
1,766,384	+		LU632_RS09330	0.52	+0.9
1,766,385	-		LU632_RS09330	0.52	+1.6
1,766,385	-		LU632_RS09330	0.52	-1.5
1,766,429	-		LU632_RS09330	0.58	+0.3
1,766,431	+		LU632_RS09330	0.58	+2.5
1,766,432	-		LU632_RS09330	0.58	+1.7
1,766,565	+		LU632_RS09330	0.73	+0.7
1,766,565	+		LU632_RS09330	0.73	-1.8
1,766,566	-		LU632_RS09330	0.73	+3.0
1,766,677	-		LU632_RS09330	0.86	+0.5
1,766,876	-				-1.5
1,766,899	+				+0.3
1,766,900	-				-0.7
1,767,074	+				-2.3
1,767,084	-				-0.9
1,767,084	-				+0.7
1,767,093	-				-1.3
1,767,093	-				+1.1
1,767,105	-				+0.3
1,767,345	+		LU632_RS09335	0.22	-2.4
1,767,346	-		LU632_RS09335	0.22	-1.2
1,767,348	+		LU632_RS09335	0.22	+1.5
1,767,349	-		LU632_RS09335	0.23	-0.1
1,767,505	+		LU632_RS09335	0.31	+2.8
1,767,506	-		LU632_RS09335	0.31	+1.4
1,767,506	-		LU632_RS09335	0.31	+1.6
1,767,553	+		LU632_RS09335	0.33	+0.1
1,767,659	+		LU632_RS09335	0.39	-0.6
1,767,660	-		LU632_RS09335	0.39	+1.7
1,767,660	-		LU632_RS09335	0.39	-1.9
1,767,660	-		LU632_RS09335	0.39	-1.0
1,767,743	+		LU632_RS09335	0.43	+0.4
1,767,743	+		LU632_RS09335	0.43	+0.6
1,767,743	+		LU632_RS09335	0.43	-2.2
1,767,744	-		LU632_RS09335	0.43	+1.0
1,767,761	+		LU632_RS09335	0.44	-1.0
1,767,761	+		LU632_RS09335	0.44	-0.9
1,767,761	+		LU632_RS09335	0.44	+0.1
1,767,762	-		LU632_RS09335	0.44	+1.0
1,767,765	-		LU632_RS09335	0.44	+1.2
1,767,780	+		LU632_RS09335	0.45	-0.2