Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08625

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
1,615,895	-		LU632_RS08615	0.28	-0.4
1,615,895	-		LU632_RS08615	0.28	-1.4
1,615,916	+		LU632_RS08615	0.34	+0.3
1,615,922	+		LU632_RS08615	0.36	+0.2
1,615,998	+		LU632_RS08615	0.59	-1.4
1,616,022	+		LU632_RS08615	0.66	-1.0
1,616,043	-		LU632_RS08615	0.73	+1.3
1,616,088	-		LU632_RS08615	0.87	+0.6
1,616,088	-		LU632_RS08615	0.87	-2.2
1,616,088	-		LU632_RS08615	0.87	-0.6
1,616,132	-				+1.0
1,616,132	-				+0.7
1,616,178	+				-0.0
1,616,179	-				-0.4
1,616,213	-				+0.3
1,616,233	-				-1.0
1,616,250	+				+1.6
1,616,255	-				-0.5
1,616,359	+				+0.5
1,616,359	+				-2.7
1,616,359	+				-0.9
1,616,388	-				+0.8
1,616,388	-				-0.1
1,616,388	-				+0.1
1,616,388	-				-0.1
1,616,461	-		LU632_RS08620	0.22	-2.7
1,616,461	-		LU632_RS08620	0.22	+0.8
1,616,475	-		LU632_RS08620	0.27	-0.2
1,616,631	+		LU632_RS08620	0.76	+0.4
1,616,631	+		LU632_RS08620	0.76	+0.1
1,617,337	+				-3.0
1,617,360	+				+1.1
1,617,370	+				+2.1
1,617,452	-		LU632_RS08630	0.30	-0.1
1,617,648	-		LU632_RS08630	0.79	+3.1
1,617,674	-		LU632_RS08630	0.86	+0.9
1,617,674	-		LU632_RS08630	0.86	-0.0
1,617,677	-		LU632_RS08630	0.87	-0.3
1,618,154	-		LU632_RS08640	0.10	+0.6