Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06150

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
1,170,977	+				-1.4
1,170,978	-				+2.2
1,171,026	+		LU632_RS06145	0.10	+2.2
1,171,102	+		LU632_RS06145	0.18	+1.4
1,171,185	+		LU632_RS06145	0.25	+3.1
1,171,240	-		LU632_RS06145	0.31	+1.8
1,171,423	+		LU632_RS06145	0.48	+0.1
1,171,423	+		LU632_RS06145	0.48	+2.7
1,171,424	-		LU632_RS06145	0.48	+1.7
1,171,424	-		LU632_RS06145	0.48	+1.6
1,171,494	+		LU632_RS06145	0.55	-0.2
1,171,498	-		LU632_RS06145	0.55	+3.4
1,171,501	+		LU632_RS06145	0.56	+2.6
1,171,502	-		LU632_RS06145	0.56	+1.8
1,171,603	-		LU632_RS06145	0.65	+3.1
1,171,670	+		LU632_RS06145	0.72	+2.8
1,171,670	+		LU632_RS06145	0.72	+0.1
1,171,670	+		LU632_RS06145	0.72	+2.1
1,171,672	+		LU632_RS06145	0.72	-0.3
1,171,673	-		LU632_RS06145	0.72	+1.3
1,171,673	-		LU632_RS06145	0.72	+0.6
1,171,689	+		LU632_RS06145	0.73	+1.8
1,171,690	-		LU632_RS06145	0.74	+1.9
1,171,711	+		LU632_RS06145	0.76	+3.4
1,171,908	+				+1.8
1,171,909	-				+1.3
1,171,968	-				+3.5
1,171,968	-				+1.6
1,172,012	-				-2.2
1,172,024	-				-0.7
1,172,024	-				-1.4
1,172,053	-		LU632_RS06150	0.11	-0.5
1,172,054	+		LU632_RS06150	0.11	+2.3
1,172,055	-		LU632_RS06150	0.11	-0.5
1,172,470	-		LU632_RS06150	0.61	+1.6
1,172,489	+		LU632_RS06150	0.63	+1.1
1,172,489	+		LU632_RS06150	0.63	-0.8
1,172,490	-		LU632_RS06150	0.63	-1.4
1,172,490	-		LU632_RS06150	0.63	-0.2
1,172,490	-		LU632_RS06150	0.63	+1.4
1,172,490	-		LU632_RS06150	0.63	+1.9
1,172,681	+		LU632_RS06150	0.86	+2.2
1,172,682	-		LU632_RS06150	0.86	-1.7
1,172,724	+				+2.7
1,172,724	+				+2.7
1,172,804	-				+1.2
1,172,843	+				+5.7
1,172,843	+				+1.1
1,172,844	-				+0.2
1,172,867	-				-0.6
1,172,989	+				+2.5
1,172,990	-				-1.4
1,172,990	-				-1.2
1,172,992	-				+0.7
1,172,993	+				+0.8
1,172,993	+				+0.2
1,172,994	-				-2.3
1,173,055	-		LU632_RS06155	0.13	+0.1
1,173,163	-		LU632_RS06155	0.27	-1.5
1,173,165	+		LU632_RS06155	0.27	+0.1
1,173,258	+		LU632_RS06155	0.39	+2.1
1,173,259	-		LU632_RS06155	0.39	-0.3
1,173,269	-		LU632_RS06155	0.41	-1.1
1,173,309	+		LU632_RS06155	0.46	+1.2
1,173,310	-		LU632_RS06155	0.46	+0.4
1,173,367	-		LU632_RS06155	0.54	+2.0
1,173,403	-		LU632_RS06155	0.58	+1.0
1,173,441	+		LU632_RS06155	0.63	+3.3
1,173,454	-		LU632_RS06155	0.65	-1.2
1,173,677	-				+1.0
1,173,711	-				+0.4
1,173,752	-				-1.2
1,173,781	-				+0.9
1,173,781	-				+0.5
1,173,794	-				+0.5