Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS02725

Experiment: Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2)
549,649	-	pdxA	LU632_RS02725	0.68	+0.2
549,829	+	pdxA	LU632_RS02725	0.86	-1.0
549,934	+				-2.7
549,962	+				-2.1
550,033	+				-1.3
550,034	-				-2.3
550,036	-				+0.2
550,144	-	rsmA	LU632_RS02730	0.22	-0.9
550,261	+	rsmA	LU632_RS02730	0.36	-0.2
550,309	+	rsmA	LU632_RS02730	0.42	-1.3
550,310	-	rsmA	LU632_RS02730	0.42	-1.5
550,311	+	rsmA	LU632_RS02730	0.42	-0.8
550,349	-	rsmA	LU632_RS02730	0.46	+0.8
550,351	-	rsmA	LU632_RS02730	0.47	+0.0
550,459	+	rsmA	LU632_RS02730	0.60	-1.2
550,538	+	rsmA	LU632_RS02730	0.69	-1.2
550,629	+	rsmA	LU632_RS02730	0.80	+1.5
550,835	-	apaG	LU632_RS02735	0.10	-0.7
550,874	+	apaG	LU632_RS02735	0.21	+0.4
550,888	+	apaG	LU632_RS02735	0.24	+0.6
550,888	+	apaG	LU632_RS02735	0.24	-0.7
550,929	+	apaG	LU632_RS02735	0.35	-0.2