Strain Fitness in Escherichia coli ECOR38 around HEPCGN_16860

Experiment: RB23

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RB23
2,122,548	+	mlaF	HEPCGN_16850	0.77	-2.2
2,122,549	-	mlaF	HEPCGN_16850	0.77	+1.3
2,122,549	-	mlaF	HEPCGN_16850	0.77	-0.6
2,122,549	-	mlaF	HEPCGN_16850	0.77	-1.6
2,122,549	-	mlaF	HEPCGN_16850	0.77	-0.2
2,122,552	+	mlaF	HEPCGN_16850	0.78	+0.7
2,122,641	+	mlaF	HEPCGN_16850	0.89	-1.2
2,122,662	+				-0.0
2,122,748	-				-1.8
2,122,748	-				-1.9
2,122,814	-				-1.9
2,122,886	+	mlaE	HEPCGN_16855	0.19	-1.7
2,122,913	+	mlaE	HEPCGN_16855	0.22	-0.9
2,122,962	+	mlaE	HEPCGN_16855	0.28	-2.8
2,122,980	+	mlaE	HEPCGN_16855	0.31	-1.5
2,122,980	+	mlaE	HEPCGN_16855	0.31	-1.5
2,122,980	+	mlaE	HEPCGN_16855	0.31	-1.9
2,122,981	-	mlaE	HEPCGN_16855	0.31	-1.6
2,122,981	-	mlaE	HEPCGN_16855	0.31	-0.4
2,122,981	-	mlaE	HEPCGN_16855	0.31	-0.0
2,122,982	+	mlaE	HEPCGN_16855	0.31	-2.2
2,122,982	+	mlaE	HEPCGN_16855	0.31	-1.5
2,122,982	+	mlaE	HEPCGN_16855	0.31	+0.6
2,123,132	+	mlaE	HEPCGN_16855	0.50	-2.0
2,123,195	+	mlaE	HEPCGN_16855	0.58	-1.5
2,123,204	-	mlaE	HEPCGN_16855	0.59	-0.0
2,123,220	-	mlaE	HEPCGN_16855	0.61	-1.3
2,123,220	-	mlaE	HEPCGN_16855	0.61	-1.9
2,123,351	+	mlaE	HEPCGN_16855	0.78	-2.3
2,123,352	-	mlaE	HEPCGN_16855	0.78	-1.4
2,123,570	+				-1.7
2,123,627	+	mlaD	HEPCGN_16860	0.18	-1.5
2,123,628	-	mlaD	HEPCGN_16860	0.18	-1.7
2,123,631	+	mlaD	HEPCGN_16860	0.19	-1.7
2,123,632	-	mlaD	HEPCGN_16860	0.19	-0.7
2,123,632	-	mlaD	HEPCGN_16860	0.19	-1.9
2,123,644	+	mlaD	HEPCGN_16860	0.21	-1.0
2,123,645	-	mlaD	HEPCGN_16860	0.21	-0.0
2,123,645	-	mlaD	HEPCGN_16860	0.21	-1.2
2,123,645	-	mlaD	HEPCGN_16860	0.21	-1.2
2,123,646	+	mlaD	HEPCGN_16860	0.22	-1.5
2,123,646	+	mlaD	HEPCGN_16860	0.22	-0.8
2,123,647	-	mlaD	HEPCGN_16860	0.22	-1.0
2,123,759	-	mlaD	HEPCGN_16860	0.42	-2.6
2,123,794	+	mlaD	HEPCGN_16860	0.48	-0.8
2,123,857	+	mlaD	HEPCGN_16860	0.60	-0.7
2,123,868	-	mlaD	HEPCGN_16860	0.62	-1.6
2,123,989	-	mlaD	HEPCGN_16860	0.84	-1.2
2,123,989	-	mlaD	HEPCGN_16860	0.84	-2.0
2,124,003	+	mlaD	HEPCGN_16860	0.86	-0.2
2,124,003	+	mlaD	HEPCGN_16860	0.86	-2.6
2,124,004	-	mlaD	HEPCGN_16860	0.86	-1.3
2,124,004	-	mlaD	HEPCGN_16860	0.86	-1.7
2,124,067	-				-0.5
2,124,103	-				-1.4
2,124,110	+				+1.9
2,124,111	-				-1.2
2,124,178	+	mlaC	HEPCGN_16865	0.13	-0.5
2,124,180	+	mlaC	HEPCGN_16865	0.13	+0.1
2,124,181	-	mlaC	HEPCGN_16865	0.13	-1.1
2,124,295	+	mlaC	HEPCGN_16865	0.31	-0.5
2,124,298	-	mlaC	HEPCGN_16865	0.32	-3.1
2,124,299	+	mlaC	HEPCGN_16865	0.32	-0.2
2,124,300	-	mlaC	HEPCGN_16865	0.32	-0.6
2,124,300	-	mlaC	HEPCGN_16865	0.32	-1.7
2,124,300	-	mlaC	HEPCGN_16865	0.32	-0.9
2,124,340	+	mlaC	HEPCGN_16865	0.38	-1.7
2,124,341	-	mlaC	HEPCGN_16865	0.38	+0.0
2,124,373	+	mlaC	HEPCGN_16865	0.43	+0.7
2,124,373	+	mlaC	HEPCGN_16865	0.43	-3.4
2,124,430	+	mlaC	HEPCGN_16865	0.52	-1.2
2,124,431	-	mlaC	HEPCGN_16865	0.53	-2.6
2,124,431	-	mlaC	HEPCGN_16865	0.53	-1.0
2,124,493	-	mlaC	HEPCGN_16865	0.62	-0.9
2,124,586	+	mlaC	HEPCGN_16865	0.77	-2.4
2,124,612	+	mlaC	HEPCGN_16865	0.81	-0.5
2,124,612	+	mlaC	HEPCGN_16865	0.81	-2.2
2,124,654	+	mlaC	HEPCGN_16865	0.88	-2.5
2,124,848	+	mlaC	HEPCGN_16870	0.39	-1.1
2,124,961	+	mlaC	HEPCGN_16870	0.78	-0.5
2,124,962	-	mlaC	HEPCGN_16870	0.78	-1.1
2,124,975	+	mlaC	HEPCGN_16870	0.83	-1.0
2,124,975	+	mlaC	HEPCGN_16870	0.83	+0.3
2,124,976	-	mlaC	HEPCGN_16870	0.83	+0.5