Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS02875 and ABI39_RS02880 are separated by 37 nucleotides ABI39_RS02880 and ABI39_RS02885 are separated by 158 nucleotides
ABI39_RS02875: ABI39_RS02875 - glutamate-5-semialdehyde dehydrogenase, at 831,679 to 832,932
_RS02875
ABI39_RS02880: ABI39_RS02880 - glutamate 5-kinase, at 832,970 to 834,052
_RS02880
ABI39_RS02885: ABI39_RS02885 - Cof-type HAD-IIB family hydrolase, at 834,211 to 834,993
_RS02885
Position (kb) 832
833
834
835 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 832.085 kb on + strand, within ABI39_RS02875 at 832.153 kb on + strand, within ABI39_RS02875 at 832.313 kb on + strand, within ABI39_RS02875 at 832.313 kb on + strand, within ABI39_RS02875 at 832.344 kb on + strand, within ABI39_RS02875 at 832.421 kb on + strand, within ABI39_RS02875 at 832.477 kb on - strand, within ABI39_RS02875 at 832.510 kb on + strand, within ABI39_RS02875 at 832.515 kb on + strand, within ABI39_RS02875 at 832.612 kb on + strand, within ABI39_RS02875 at 832.709 kb on - strand, within ABI39_RS02875 at 832.709 kb on - strand, within ABI39_RS02875 at 832.959 kb on - strand at 832.986 kb on + strand at 832.987 kb on - strand at 832.987 kb on - strand at 832.997 kb on + strand at 832.998 kb on - strand at 833.094 kb on - strand, within ABI39_RS02880 at 833.132 kb on + strand, within ABI39_RS02880 at 833.170 kb on + strand, within ABI39_RS02880 at 833.357 kb on + strand, within ABI39_RS02880 at 833.357 kb on + strand, within ABI39_RS02880 at 833.526 kb on + strand, within ABI39_RS02880 at 833.526 kb on + strand, within ABI39_RS02880 at 833.527 kb on - strand, within ABI39_RS02880 at 833.527 kb on - strand, within ABI39_RS02880 at 833.611 kb on + strand, within ABI39_RS02880 at 833.660 kb on + strand, within ABI39_RS02880 at 833.660 kb on + strand, within ABI39_RS02880 at 833.765 kb on - strand, within ABI39_RS02880 at 834.080 kb on - strand at 834.134 kb on + strand at 834.184 kb on + strand at 834.185 kb on - strand at 834.267 kb on + strand at 834.391 kb on + strand, within ABI39_RS02885 at 834.413 kb on - strand, within ABI39_RS02885 at 834.482 kb on + strand, within ABI39_RS02885 at 834.614 kb on + strand, within ABI39_RS02885 at 834.768 kb on + strand, within ABI39_RS02885 at 834.769 kb on - strand, within ABI39_RS02885 at 834.885 kb on - strand, within ABI39_RS02885 at 834.888 kb on + strand, within ABI39_RS02885 at 834.945 kb on - strand at 834.945 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 832,085 + ABI39_RS02875 0.32 -4.5 832,153 + ABI39_RS02875 0.38 -5.1 832,313 + ABI39_RS02875 0.51 -5.6 832,313 + ABI39_RS02875 0.51 -5.4 832,344 + ABI39_RS02875 0.53 -3.5 832,421 + ABI39_RS02875 0.59 -3.8 832,477 - ABI39_RS02875 0.64 -3.8 832,510 + ABI39_RS02875 0.66 -4.9 832,515 + ABI39_RS02875 0.67 -4.3 832,612 + ABI39_RS02875 0.74 -4.8 832,709 - ABI39_RS02875 0.82 -5.3 832,709 - ABI39_RS02875 0.82 -3.5 832,959 - -0.3 832,986 + -4.0 832,987 - -5.3 832,987 - -5.0 832,997 + -4.1 832,998 - -3.8 833,094 - ABI39_RS02880 0.11 -4.3 833,132 + ABI39_RS02880 0.15 -5.2 833,170 + ABI39_RS02880 0.18 -3.6 833,357 + ABI39_RS02880 0.36 -3.1 833,357 + ABI39_RS02880 0.36 -3.1 833,526 + ABI39_RS02880 0.51 -3.5 833,526 + ABI39_RS02880 0.51 -6.0 833,527 - ABI39_RS02880 0.51 -5.0 833,527 - ABI39_RS02880 0.51 -5.1 833,611 + ABI39_RS02880 0.59 -5.8 833,660 + ABI39_RS02880 0.64 -5.2 833,660 + ABI39_RS02880 0.64 -4.3 833,765 - ABI39_RS02880 0.73 -6.3 834,080 - -0.0 834,134 + -1.1 834,184 + -2.1 834,185 - +0.1 834,267 + -0.5 834,391 + ABI39_RS02885 0.23 -0.5 834,413 - ABI39_RS02885 0.26 +0.2 834,482 + ABI39_RS02885 0.35 -1.0 834,614 + ABI39_RS02885 0.51 +0.2 834,768 + ABI39_RS02885 0.71 +0.1 834,769 - ABI39_RS02885 0.71 -0.1 834,885 - ABI39_RS02885 0.86 +0.4 834,888 + ABI39_RS02885 0.86 -0.2 834,945 - -0.3 834,945 - +0.1
Or see this region's nucleotide sequence