Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS01295 and ABI39_RS01300 are separated by 461 nucleotides ABI39_RS01300 and ABI39_RS01305 are separated by 155 nucleotides
ABI39_RS01295: ABI39_RS01295 - NADP-dependent malic enzyme, at 399,808 to 402,093
_RS01295
ABI39_RS01300: ABI39_RS01300 - NADP-specific glutamate dehydrogenase, at 402,555 to 403,889
_RS01300
ABI39_RS01305: ABI39_RS01305 - PCMD domain-containing protein, at 404,045 to 405,193
_RS01305
Position (kb) 402
403
404 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 401.640 kb on + strand, within ABI39_RS01295 at 401.762 kb on - strand, within ABI39_RS01295 at 401.793 kb on - strand, within ABI39_RS01295 at 401.793 kb on - strand, within ABI39_RS01295 at 401.829 kb on + strand, within ABI39_RS01295 at 401.834 kb on + strand, within ABI39_RS01295 at 401.889 kb on - strand at 401.919 kb on + strand at 401.924 kb on - strand at 401.992 kb on - strand at 402.096 kb on - strand at 402.157 kb on + strand at 402.289 kb on - strand at 402.637 kb on + strand at 402.723 kb on + strand, within ABI39_RS01300 at 402.758 kb on + strand, within ABI39_RS01300 at 402.795 kb on - strand, within ABI39_RS01300 at 402.903 kb on - strand, within ABI39_RS01300 at 403.187 kb on + strand, within ABI39_RS01300 at 403.316 kb on - strand, within ABI39_RS01300 at 403.347 kb on + strand, within ABI39_RS01300 at 403.418 kb on + strand, within ABI39_RS01300 at 403.453 kb on - strand, within ABI39_RS01300 at 403.456 kb on + strand, within ABI39_RS01300 at 403.564 kb on + strand, within ABI39_RS01300 at 403.673 kb on - strand, within ABI39_RS01300 at 403.735 kb on + strand, within ABI39_RS01300 at 403.755 kb on - strand, within ABI39_RS01300 at 403.783 kb on + strand at 403.911 kb on + strand at 403.912 kb on - strand at 403.912 kb on - strand at 403.915 kb on + strand at 404.012 kb on + strand at 404.017 kb on - strand at 404.017 kb on - strand at 404.018 kb on + strand at 404.032 kb on - strand at 404.470 kb on + strand, within ABI39_RS01305 at 404.484 kb on - strand, within ABI39_RS01305 at 404.487 kb on - strand, within ABI39_RS01305 at 404.718 kb on + strand, within ABI39_RS01305 at 404.785 kb on + strand, within ABI39_RS01305 at 404.843 kb on + strand, within ABI39_RS01305 at 404.844 kb on - strand, within ABI39_RS01305 at 404.873 kb on + strand, within ABI39_RS01305 at 404.874 kb on - strand, within ABI39_RS01305
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 401,640 + ABI39_RS01295 0.80 -0.6 401,762 - ABI39_RS01295 0.85 -0.5 401,793 - ABI39_RS01295 0.87 -0.9 401,793 - ABI39_RS01295 0.87 -0.7 401,829 + ABI39_RS01295 0.88 -1.6 401,834 + ABI39_RS01295 0.89 -0.5 401,889 - -1.7 401,919 + +0.6 401,924 - -1.5 401,992 - -1.2 402,096 - -0.9 402,157 + -0.8 402,289 - +0.2 402,637 + -4.7 402,723 + ABI39_RS01300 0.13 -4.7 402,758 + ABI39_RS01300 0.15 -4.5 402,795 - ABI39_RS01300 0.18 -5.1 402,903 - ABI39_RS01300 0.26 -5.5 403,187 + ABI39_RS01300 0.47 -4.9 403,316 - ABI39_RS01300 0.57 -5.0 403,347 + ABI39_RS01300 0.59 -5.5 403,418 + ABI39_RS01300 0.65 -4.4 403,453 - ABI39_RS01300 0.67 -5.2 403,456 + ABI39_RS01300 0.67 -3.5 403,564 + ABI39_RS01300 0.76 -4.4 403,673 - ABI39_RS01300 0.84 -6.3 403,735 + ABI39_RS01300 0.88 -4.9 403,755 - ABI39_RS01300 0.90 -3.4 403,783 + -4.8 403,911 + -0.2 403,912 - -0.2 403,912 - -0.9 403,915 + -0.6 404,012 + -0.0 404,017 - -0.4 404,017 - +0.1 404,018 + -0.3 404,032 - +0.0 404,470 + ABI39_RS01305 0.37 +0.6 404,484 - ABI39_RS01305 0.38 +0.1 404,487 - ABI39_RS01305 0.38 +0.0 404,718 + ABI39_RS01305 0.59 +0.2 404,785 + ABI39_RS01305 0.64 -0.1 404,843 + ABI39_RS01305 0.69 +0.4 404,844 - ABI39_RS01305 0.70 -0.1 404,873 + ABI39_RS01305 0.72 +0.2 404,874 - ABI39_RS01305 0.72 -0.5
Or see this region's nucleotide sequence