Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_17060

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,744,058	+		OKGIIK_17055	0.33	-0.2
3,744,058	+		OKGIIK_17055	0.33	+0.2
3,744,058	+		OKGIIK_17055	0.33	-0.8
3,744,058	+		OKGIIK_17055	0.33	-2.6
3,744,058	+		OKGIIK_17055	0.33	-0.6
3,744,058	+		OKGIIK_17055	0.33	+0.5
3,744,058	+		OKGIIK_17055	0.33	-1.3
3,744,059	-		OKGIIK_17055	0.33	-0.2
3,744,059	-		OKGIIK_17055	0.33	-0.9
3,744,059	-		OKGIIK_17055	0.33	-0.1
3,744,059	-		OKGIIK_17055	0.33	-0.8
3,744,059	-		OKGIIK_17055	0.33	-0.5
3,744,076	+		OKGIIK_17055	0.34	-1.7
3,744,076	+		OKGIIK_17055	0.34	-0.9
3,744,076	+		OKGIIK_17055	0.34	+0.1
3,744,076	+		OKGIIK_17055	0.34	-1.4
3,744,076	+		OKGIIK_17055	0.34	-1.6
3,744,077	-		OKGIIK_17055	0.34	-1.3
3,744,077	-		OKGIIK_17055	0.34	-0.8
3,744,115	+		OKGIIK_17055	0.37	-2.1
3,744,115	+		OKGIIK_17055	0.37	-1.1
3,744,116	-		OKGIIK_17055	0.37	-1.9
3,744,116	-		OKGIIK_17055	0.37	+0.4
3,744,116	-		OKGIIK_17055	0.37	-0.4
3,744,116	-		OKGIIK_17055	0.37	-1.1
3,744,116	-		OKGIIK_17055	0.37	-0.5
3,744,116	-		OKGIIK_17055	0.37	-0.9
3,744,116	-		OKGIIK_17055	0.37	-0.8
3,744,116	-		OKGIIK_17055	0.37	-1.5
3,744,139	+		OKGIIK_17055	0.38	-1.1
3,744,139	+		OKGIIK_17055	0.38	-1.4
3,744,139	+		OKGIIK_17055	0.38	-1.5
3,744,139	+		OKGIIK_17055	0.38	-0.1
3,744,139	+		OKGIIK_17055	0.38	-0.7
3,744,140	-		OKGIIK_17055	0.39	-1.3
3,744,140	-		OKGIIK_17055	0.39	-0.3
3,744,140	-		OKGIIK_17055	0.39	-1.6
3,744,140	-		OKGIIK_17055	0.39	-0.1
3,744,140	-		OKGIIK_17055	0.39	-0.7
3,744,140	-		OKGIIK_17055	0.39	+0.1
3,744,140	-		OKGIIK_17055	0.39	-0.5
3,744,140	-		OKGIIK_17055	0.39	-1.1
3,744,287	-		OKGIIK_17055	0.49	-0.1
3,744,287	-		OKGIIK_17055	0.49	-0.8
3,744,287	-		OKGIIK_17055	0.49	+1.1
3,744,361	-		OKGIIK_17055	0.54	-1.8
3,744,886	+				-0.6
3,744,886	+				-1.8
3,744,886	+				-0.2
3,744,886	+				-0.2
3,744,886	+				+0.4
3,744,886	+				-1.2
3,744,886	+				-1.1
3,744,887	-				-3.2
3,744,887	-				-0.5
3,744,887	-				-2.3
3,744,887	-				-1.6
3,744,892	+				-0.5
3,744,892	+				-1.1
3,744,892	+				-1.6
3,744,892	+				-1.1
3,744,892	+				-0.8
3,744,892	+				+1.1
3,744,892	+				-0.3
3,744,892	+				-2.2
3,744,893	-				+1.5
3,744,893	-				-0.5
3,744,893	-				+1.3
3,744,893	-				-1.5
3,744,893	-				+0.5
3,744,893	-				-1.5
3,744,893	-				+0.2
3,744,893	-				-1.4
3,744,893	-				-1.5
3,744,893	-				-1.8
3,744,893	-				-1.5
3,744,893	-				-1.1
3,744,937	+				+0.0
3,744,937	+				-0.5
3,744,938	-				+0.5
3,744,938	-				-0.9
3,744,938	-				-2.7
3,744,938	-				-1.1
3,744,938	-				-1.3
3,745,130	+		OKGIIK_17060	0.14	-0.8
3,745,191	+		OKGIIK_17060	0.24	-1.2
3,745,261	+		OKGIIK_17060	0.35	+0.7
3,745,261	+		OKGIIK_17060	0.35	-1.3
3,745,261	+		OKGIIK_17060	0.35	-1.9
3,745,261	+		OKGIIK_17060	0.35	-2.3
3,745,261	+		OKGIIK_17060	0.35	-0.8
3,745,262	-		OKGIIK_17060	0.35	-0.6
3,745,262	-		OKGIIK_17060	0.35	-0.8
3,745,437	+		OKGIIK_17060	0.63	-0.8
3,745,437	+		OKGIIK_17060	0.63	-1.9
3,745,437	+		OKGIIK_17060	0.63	-3.2
3,745,437	+		OKGIIK_17060	0.63	-1.5
3,745,437	+		OKGIIK_17060	0.63	-0.8
3,745,437	+		OKGIIK_17060	0.63	-0.6
3,745,438	-		OKGIIK_17060	0.63	-1.5
3,745,438	-		OKGIIK_17060	0.63	-0.8
3,745,568	+		OKGIIK_17060	0.84	-1.1
3,745,568	+		OKGIIK_17060	0.84	-1.5
3,745,569	-		OKGIIK_17060	0.84	-1.7
3,745,569	-		OKGIIK_17060	0.84	-1.1
3,745,586	+		OKGIIK_17060	0.86	-1.1
3,745,586	+		OKGIIK_17060	0.86	-0.8
3,745,586	+		OKGIIK_17060	0.86	+1.3
3,745,586	+		OKGIIK_17060	0.86	-0.1
3,745,587	-		OKGIIK_17060	0.87	-2.6
3,745,587	-		OKGIIK_17060	0.87	-1.6
3,745,614	+				+0.4
3,745,614	+				-0.3
3,745,615	-				-0.5
3,745,756	+		OKGIIK_17065	0.15	+0.5
3,745,766	+		OKGIIK_17065	0.17	-0.8
3,745,766	+		OKGIIK_17065	0.17	+0.9
3,745,816	+		OKGIIK_17065	0.27	-2.3
3,745,817	-		OKGIIK_17065	0.27	-1.3
3,746,319	+				-1.9
3,746,320	-				-0.1
3,746,320	-				-0.5
3,746,320	-				-2.2
3,746,320	-				-0.3
3,746,389	+				-0.8
3,746,389	+				+0.5
3,746,389	+				-1.1
3,746,389	+				-0.9
3,746,390	-				-1.6
3,746,390	-				-0.5
3,746,390	-				-1.8
3,746,390	-				-0.5
3,746,390	-				-1.5
3,746,390	-				-2.1
3,746,390	-				-0.6
3,746,390	-				-0.1
3,746,390	-				-1.3
3,746,390	-				-0.7
3,746,390	-				-1.8
3,746,390	-				-1.3
3,746,390	-				-0.9
3,746,401	+				-0.8
3,746,401	+				-0.1
3,746,402	-				+1.1
3,746,421	+				-1.3
3,746,421	+				-0.3
3,746,421	+				-1.9
3,746,421	+				-0.8
3,746,421	+				-1.3
3,746,421	+				-0.5
3,746,421	+				-1.8
3,746,421	+				+0.5
3,746,421	+				-0.5
3,746,421	+				-3.6
3,746,421	+				-0.2
3,746,421	+				-0.8
3,746,421	+				-1.1
3,746,421	+				+1.2
3,746,422	-				-0.5
3,746,422	-				-2.1
3,746,422	-				+1.1
3,746,422	-				-1.3
3,746,422	-				-0.5
3,746,422	-				-1.4
3,746,422	-				-1.4
3,746,422	-				+0.6
3,746,422	-				-0.4
3,746,422	-				-1.9
3,746,422	-				-1.9
3,746,422	-				-2.4
3,746,422	-				+0.1
3,746,422	-				-1.8
3,746,422	-				+0.8
3,746,422	-				+1.1
3,746,459	+				-1.7
3,746,459	+				-1.8
3,746,459	+				-1.1
3,746,459	+				-1.1
3,746,460	-				-0.5
3,746,460	-				-1.8
3,746,460	-				-2.3
3,746,460	-				-1.5
3,746,460	-				-1.1
3,746,460	-				-0.8
3,746,460	-				-2.1
3,746,460	-				-1.5
3,746,557	-				-0.5
3,746,571	+				-0.5
3,746,571	+				-1.8
3,746,571	+				-2.1
3,746,571	+				+0.8
3,746,571	+				-1.6
3,746,571	+				+0.0
3,746,571	+				-0.5
3,746,571	+				-1.9
3,746,572	-				-0.5
3,746,572	-				+0.4
3,746,572	-				-1.1
3,746,572	-				-1.1
3,746,572	-				-2.4
3,746,572	-				+0.5
3,746,572	-				-2.6
3,746,572	-				-0.5
3,746,572	-				-1.3
3,746,624	+				-0.9
3,746,640	+	astC	OKGIIK_17070	0.10	-2.3
3,746,640	+	astC	OKGIIK_17070	0.10	-0.5
3,746,640	+	astC	OKGIIK_17070	0.10	-1.1
3,746,640	+	astC	OKGIIK_17070	0.10	+0.1
3,746,640	+	astC	OKGIIK_17070	0.10	+1.5
3,746,641	-	astC	OKGIIK_17070	0.10	-2.1
3,746,641	-	astC	OKGIIK_17070	0.10	-1.3
3,746,641	-	astC	OKGIIK_17070	0.10	-0.1
3,746,641	-	astC	OKGIIK_17070	0.10	-0.5
3,746,641	-	astC	OKGIIK_17070	0.10	-1.3
3,746,641	-	astC	OKGIIK_17070	0.10	-1.6
3,746,641	-	astC	OKGIIK_17070	0.10	-0.8
3,746,641	-	astC	OKGIIK_17070	0.10	-2.7
3,746,641	-	astC	OKGIIK_17070	0.10	-0.6
3,746,641	-	astC	OKGIIK_17070	0.10	+0.5
3,746,641	-	astC	OKGIIK_17070	0.10	-0.8
3,746,641	-	astC	OKGIIK_17070	0.10	+1.2