Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16620

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,649,069	+				-0.4
3,649,070	-				+0.1
3,649,070	-				+0.1
3,649,070	-				-0.3
3,649,070	-				-1.6
3,649,070	-				+0.3
3,649,070	-				-0.1
3,649,070	-				+1.0
3,649,070	-				-1.4
3,649,070	-				-0.1
3,649,101	-				-0.6
3,649,122	+				-0.1
3,649,122	+				-1.2
3,649,122	+				-1.4
3,649,123	-				+0.3
3,649,123	-				+2.3
3,649,170	+				+1.3
3,649,170	+				-0.3
3,649,170	+				-0.1
3,649,170	+				-1.4
3,649,170	+				-0.3
3,649,170	+				+1.1
3,649,170	+				+0.7
3,649,325	+		OKGIIK_16615	0.19	-0.7
3,649,325	+		OKGIIK_16615	0.19	-1.8
3,649,325	+		OKGIIK_16615	0.19	-0.3
3,649,325	+		OKGIIK_16615	0.19	-0.3
3,649,325	+		OKGIIK_16615	0.19	-1.3
3,649,325	+		OKGIIK_16615	0.19	-0.3
3,649,325	+		OKGIIK_16615	0.19	-0.3
3,649,326	-		OKGIIK_16615	0.19	+0.6
3,649,326	-		OKGIIK_16615	0.19	-0.1
3,649,326	-		OKGIIK_16615	0.19	-0.9
3,649,326	-		OKGIIK_16615	0.19	-0.9
3,649,326	-		OKGIIK_16615	0.19	-0.6
3,649,326	-		OKGIIK_16615	0.19	-1.4
3,649,326	-		OKGIIK_16615	0.19	+0.3
3,649,326	-		OKGIIK_16615	0.19	-0.9
3,649,326	-		OKGIIK_16615	0.19	-0.6
3,649,385	+		OKGIIK_16615	0.26	-0.4
3,649,386	-		OKGIIK_16615	0.26	-0.6
3,649,403	+		OKGIIK_16615	0.29	-0.1
3,649,403	+		OKGIIK_16615	0.29	-0.7
3,649,403	+		OKGIIK_16615	0.29	-1.0
3,649,403	+		OKGIIK_16615	0.29	+0.3
3,649,404	-		OKGIIK_16615	0.29	-0.7
3,649,404	-		OKGIIK_16615	0.29	+1.3
3,649,404	-		OKGIIK_16615	0.29	+0.9
3,649,463	+		OKGIIK_16615	0.36	-0.6
3,649,463	+		OKGIIK_16615	0.36	+0.3
3,649,464	-		OKGIIK_16615	0.36	+0.3
3,649,464	-		OKGIIK_16615	0.36	+0.4
3,649,464	-		OKGIIK_16615	0.36	-0.6
3,649,464	-		OKGIIK_16615	0.36	+1.3
3,649,625	+		OKGIIK_16615	0.57	+0.4
3,649,625	+		OKGIIK_16615	0.57	-0.1
3,649,625	+		OKGIIK_16615	0.57	-1.2
3,649,626	-		OKGIIK_16615	0.57	-0.9
3,649,626	-		OKGIIK_16615	0.57	-1.2
3,649,724	+		OKGIIK_16615	0.70	-0.9
3,649,724	+		OKGIIK_16615	0.70	-0.2
3,649,724	+		OKGIIK_16615	0.70	-0.1
3,649,724	+		OKGIIK_16615	0.70	+0.1
3,649,724	+		OKGIIK_16615	0.70	+0.4
3,649,725	-		OKGIIK_16615	0.70	+0.3
3,649,725	-		OKGIIK_16615	0.70	+0.2
3,649,725	-		OKGIIK_16615	0.70	-0.1
3,649,769	+		OKGIIK_16615	0.76	-0.3
3,649,769	+		OKGIIK_16615	0.76	+2.1
3,649,769	+		OKGIIK_16615	0.76	+0.3
3,649,769	+		OKGIIK_16615	0.76	+0.4
3,649,769	+		OKGIIK_16615	0.76	+1.1
3,649,769	+		OKGIIK_16615	0.76	-0.4
3,649,769	+		OKGIIK_16615	0.76	-0.5
3,649,769	+		OKGIIK_16615	0.76	-0.1
3,649,769	+		OKGIIK_16615	0.76	-0.2
3,649,769	+		OKGIIK_16615	0.76	-1.1
3,649,769	+		OKGIIK_16615	0.76	-0.4
3,649,769	+		OKGIIK_16615	0.76	+0.3
3,649,769	+		OKGIIK_16615	0.76	-0.9
3,649,769	+		OKGIIK_16615	0.76	-0.7
3,649,770	-		OKGIIK_16615	0.76	-0.4
3,649,770	-		OKGIIK_16615	0.76	-0.7
3,649,770	-		OKGIIK_16615	0.76	+0.6
3,649,770	-		OKGIIK_16615	0.76	+0.9
3,649,770	-		OKGIIK_16615	0.76	-1.1
3,649,770	-		OKGIIK_16615	0.76	+0.0
3,649,770	-		OKGIIK_16615	0.76	+0.3
3,649,770	-		OKGIIK_16615	0.76	-0.7
3,649,770	-		OKGIIK_16615	0.76	-0.7
3,649,770	-		OKGIIK_16615	0.76	+1.8
3,649,770	-		OKGIIK_16615	0.76	+0.3
3,649,770	-		OKGIIK_16615	0.76	+0.5
3,649,770	-		OKGIIK_16615	0.76	+0.9
3,649,770	-		OKGIIK_16615	0.76	+0.4
3,649,770	-		OKGIIK_16615	0.76	-0.7
3,649,778	+		OKGIIK_16615	0.77	+0.0
3,649,778	+		OKGIIK_16615	0.77	-0.7
3,649,778	+		OKGIIK_16615	0.77	+0.1
3,649,778	+		OKGIIK_16615	0.77	-0.7
3,649,778	+		OKGIIK_16615	0.77	+0.9
3,649,778	+		OKGIIK_16615	0.77	-0.6
3,649,778	+		OKGIIK_16615	0.77	+1.3
3,649,778	+		OKGIIK_16615	0.77	-0.3
3,649,778	+		OKGIIK_16615	0.77	-1.3
3,649,778	+		OKGIIK_16615	0.77	+0.8
3,649,778	+		OKGIIK_16615	0.77	+0.3
3,649,778	+		OKGIIK_16615	0.77	-0.7
3,649,779	-		OKGIIK_16615	0.77	-1.7
3,649,779	-		OKGIIK_16615	0.77	+0.1
3,649,779	-		OKGIIK_16615	0.77	-0.3
3,649,779	-		OKGIIK_16615	0.77	+0.4
3,649,779	-		OKGIIK_16615	0.77	+0.3
3,649,779	-		OKGIIK_16615	0.77	-0.4
3,649,779	-		OKGIIK_16615	0.77	-0.1
3,649,841	+		OKGIIK_16615	0.85	+0.7
3,649,841	+		OKGIIK_16615	0.85	+0.3
3,649,842	-		OKGIIK_16615	0.85	+0.8
3,649,842	-		OKGIIK_16615	0.85	+0.3
3,650,317	+	ccmA	OKGIIK_16620	0.37	+0.3
3,650,317	+	ccmA	OKGIIK_16620	0.37	-0.3
3,650,317	+	ccmA	OKGIIK_16620	0.37	+0.8
3,650,317	+	ccmA	OKGIIK_16620	0.37	+0.4
3,650,317	+	ccmA	OKGIIK_16620	0.37	-1.1
3,650,318	-	ccmA	OKGIIK_16620	0.37	-0.4
3,650,318	-	ccmA	OKGIIK_16620	0.37	-0.1
3,650,318	-	ccmA	OKGIIK_16620	0.37	-1.1
3,650,318	-	ccmA	OKGIIK_16620	0.37	+1.9
3,650,542	+	ccmA	OKGIIK_16620	0.61	+1.9
3,650,542	+	ccmA	OKGIIK_16620	0.61	+0.5
3,650,542	+	ccmA	OKGIIK_16620	0.61	+0.4
3,650,542	+	ccmA	OKGIIK_16620	0.61	+0.8
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.5
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.9
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.2
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.8
3,650,543	-	ccmA	OKGIIK_16620	0.61	-0.7
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.3
3,650,543	-	ccmA	OKGIIK_16620	0.61	+0.3
3,650,584	+	ccmA	OKGIIK_16620	0.65	-0.4
3,650,585	-	ccmA	OKGIIK_16620	0.65	-0.1
3,650,860	+				-1.1
3,650,861	-				-2.2
3,650,861	-				-1.1
3,650,861	-				+0.5
3,650,900	+				+0.2
3,650,900	+				+0.5
3,650,901	-				-0.3
3,650,901	-				-0.3
3,650,947	+				-1.1
3,650,948	-				+0.3
3,650,948	-				+2.3
3,650,948	-				-0.4
3,650,948	-				-0.2
3,650,948	-				-0.1
3,650,950	+				+0.1
3,650,950	+				+1.0
3,650,950	+				-0.1
3,650,950	+				+0.5
3,650,950	+				+0.7
3,650,950	+				-1.1
3,650,950	+				+0.3
3,650,951	-				+0.8
3,650,951	-				+1.3
3,650,951	-				+0.3
3,650,951	-				+0.7
3,650,951	-				-0.2
3,650,951	-				-1.0
3,650,951	-				-0.3
3,650,951	-				-0.6
3,650,951	-				-1.0
3,650,951	-				+0.5
3,650,951	-				+0.7
3,650,951	-				+0.1
3,650,951	-				-0.1
3,650,953	-				-0.4
3,650,953	-				+0.1
3,651,149	+		OKGIIK_16625	0.18	-2.3
3,651,149	+		OKGIIK_16625	0.18	-0.1
3,651,149	+		OKGIIK_16625	0.18	-0.6
3,651,150	-		OKGIIK_16625	0.18	+0.3
3,651,179	+		OKGIIK_16625	0.22	-1.9
3,651,179	+		OKGIIK_16625	0.22	-1.1
3,651,179	+		OKGIIK_16625	0.22	+1.0
3,651,179	+		OKGIIK_16625	0.22	-1.1
3,651,179	+		OKGIIK_16625	0.22	-2.2
3,651,179	+		OKGIIK_16625	0.22	-1.7
3,651,179	+		OKGIIK_16625	0.22	-0.6
3,651,179	+		OKGIIK_16625	0.22	-0.1
3,651,180	-		OKGIIK_16625	0.22	-0.5
3,651,180	-		OKGIIK_16625	0.22	+2.0
3,651,180	-		OKGIIK_16625	0.22	+0.7
3,651,180	-		OKGIIK_16625	0.22	+0.3
3,651,242	+		OKGIIK_16625	0.31	-0.1
3,651,242	+		OKGIIK_16625	0.31	+0.0
3,651,242	+		OKGIIK_16625	0.31	+1.1
3,651,242	+		OKGIIK_16625	0.31	+0.8
3,651,242	+		OKGIIK_16625	0.31	+1.3
3,651,242	+		OKGIIK_16625	0.31	-0.3
3,651,242	+		OKGIIK_16625	0.31	+1.1
3,651,243	-		OKGIIK_16625	0.31	-1.4
3,651,243	-		OKGIIK_16625	0.31	-0.3
3,651,243	-		OKGIIK_16625	0.31	+1.1
3,651,243	-		OKGIIK_16625	0.31	+1.4
3,651,243	-		OKGIIK_16625	0.31	+0.4
3,651,243	-		OKGIIK_16625	0.31	-1.2
3,651,243	-		OKGIIK_16625	0.31	+0.3
3,651,243	-		OKGIIK_16625	0.31	-0.4
3,651,243	-		OKGIIK_16625	0.31	-0.9
3,651,243	-		OKGIIK_16625	0.31	-3.7
3,651,243	-		OKGIIK_16625	0.31	-0.1
3,651,243	-		OKGIIK_16625	0.31	-1.8
3,651,243	-		OKGIIK_16625	0.31	-0.3
3,651,243	-		OKGIIK_16625	0.31	+0.9
3,651,243	-		OKGIIK_16625	0.31	+0.1
3,651,243	-		OKGIIK_16625	0.31	+1.8
3,651,243	-		OKGIIK_16625	0.31	+0.8
3,651,317	+		OKGIIK_16625	0.41	+0.3
3,651,317	+		OKGIIK_16625	0.41	-0.1
3,651,359	+		OKGIIK_16625	0.46	-0.6
3,651,359	+		OKGIIK_16625	0.46	-0.8
3,651,359	+		OKGIIK_16625	0.46	-0.9
3,651,359	+		OKGIIK_16625	0.46	-1.1
3,651,359	+		OKGIIK_16625	0.46	-0.3
3,651,360	-		OKGIIK_16625	0.46	+1.8
3,651,360	-		OKGIIK_16625	0.46	+2.3
3,651,395	+		OKGIIK_16625	0.51	+1.9
3,651,461	+		OKGIIK_16625	0.60	-1.6
3,651,461	+		OKGIIK_16625	0.60	-0.8
3,651,462	-		OKGIIK_16625	0.60	-0.1
3,651,462	-		OKGIIK_16625	0.60	-0.9
3,651,491	+		OKGIIK_16625	0.64	-0.3
3,651,492	-		OKGIIK_16625	0.64	-1.6
3,651,492	-		OKGIIK_16625	0.64	+0.8
3,651,653	+		OKGIIK_16625	0.86	+0.1
3,651,653	+		OKGIIK_16625	0.86	-1.4
3,651,653	+		OKGIIK_16625	0.86	-0.9
3,651,653	+		OKGIIK_16625	0.86	-1.4
3,651,653	+		OKGIIK_16625	0.86	+0.7
3,651,653	+		OKGIIK_16625	0.86	-0.7
3,651,653	+		OKGIIK_16625	0.86	-0.3
3,651,654	-		OKGIIK_16625	0.86	+1.3
3,651,654	-		OKGIIK_16625	0.86	-0.4
3,651,654	-		OKGIIK_16625	0.86	-1.4
3,651,654	-		OKGIIK_16625	0.86	+0.0
3,651,654	-		OKGIIK_16625	0.86	-0.0
3,651,654	-		OKGIIK_16625	0.86	-0.7
3,651,654	-		OKGIIK_16625	0.86	-0.1
3,651,743	+				-1.2
3,651,743	+				+0.3
3,651,743	+				-0.0
3,651,743	+				+0.3
3,651,743	+				-0.1
3,651,743	+				+0.7
3,651,743	+				-0.1
3,651,744	-				+0.3
3,651,744	-				-1.0
3,651,744	-				-0.1
3,651,744	-				-1.5
3,651,744	-				-0.4
3,651,744	-				-2.0
3,651,833	+				+0.3
3,651,833	+				+0.0
3,651,833	+				-0.6
3,651,833	+				-0.1
3,651,833	+				-0.1
3,651,833	+				-0.7
3,651,833	+				+0.3
3,651,834	-				+0.4
3,651,834	-				-0.6
3,651,834	-				+1.1
3,651,834	-				-1.0
3,651,834	-				-0.1
3,651,834	-				+1.3
3,651,834	-				-2.1
3,651,834	-				+1.9
3,651,834	-				-0.6
3,651,863	+				+1.0
3,651,863	+				-0.3
3,651,864	-				-1.4
3,651,864	-				-2.4
3,651,864	-				-0.3
3,651,864	-				+0.0
3,651,864	-				-0.1
3,651,864	-				+1.3