Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16465

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,612,350	-	bioD	OKGIIK_16455	0.31	+1.7
3,612,350	-	bioD	OKGIIK_16455	0.31	-1.2
3,612,890	+				-0.6
3,612,890	+				-1.4
3,612,890	+				-0.7
3,612,890	+				+0.3
3,612,890	+				-0.7
3,612,890	+				+0.3
3,612,890	+				+1.5
3,612,891	-				+0.7
3,612,891	-				-1.0
3,612,891	-				+0.9
3,612,891	-				-0.7
3,612,891	-				-0.0
3,612,891	-				-0.7
3,612,893	+				-2.5
3,612,893	+				+0.3
3,612,893	+				-0.1
3,612,893	+				+0.3
3,612,893	+				-0.3
3,612,893	+				+0.8
3,612,893	+				+0.4
3,612,893	+				+0.3
3,612,893	+				-1.2
3,612,893	+				-0.1
3,612,893	+				+0.3
3,612,893	+				-1.2
3,612,893	+				-0.3
3,612,893	+				-0.7
3,612,893	+				+0.3
3,612,894	-				-0.1
3,612,894	-				+1.0
3,612,894	-				+0.3
3,612,894	-				-0.7
3,612,894	-				-0.1
3,612,894	-				-1.2
3,612,894	-				-1.4
3,612,894	-				+0.3
3,612,894	-				-0.3
3,612,894	-				+0.3
3,612,894	-				+0.8
3,612,894	-				+1.5
3,612,894	-				-0.6
3,612,894	-				-0.4
3,612,947	+		OKGIIK_16460	0.21	-0.3
3,613,173	-		OKGIIK_16460	0.86	-0.3
3,613,173	-		OKGIIK_16460	0.86	+2.3
3,613,173	-		OKGIIK_16460	0.86	-0.1
3,613,173	-		OKGIIK_16460	0.86	+0.3
3,613,173	-		OKGIIK_16460	0.86	+0.3
3,613,223	+				+1.3
3,613,223	+				+0.4
3,613,223	+				+0.3
3,613,223	+				-1.4
3,613,224	-				+0.7
3,613,224	-				+1.4
3,613,224	-				-0.7
3,613,266	+				-2.1
3,613,266	+				-0.3
3,613,266	+				+0.2
3,613,485	+				-0.4
3,613,485	+				+0.7
3,613,485	+				+0.4
3,613,485	+				-0.1
3,613,485	+				+0.3
3,613,485	+				-0.7
3,613,485	+				+0.4
3,613,485	+				+0.4
3,613,485	+				+2.0
3,613,485	+				-0.9
3,613,485	+				+1.3
3,613,485	+				+1.1
3,613,485	+				+0.3
3,613,485	+				-0.3
3,613,485	+				+0.8
3,613,485	+				+0.1
3,613,485	+				-0.2
3,613,485	+				-0.3
3,613,485	+				-1.4
3,613,485	+				+0.3
3,613,486	-				-0.8
3,613,545	+				+1.3
3,613,545	+				-0.1
3,613,546	-	dcp	OKGIIK_16465	0.10	-0.6
3,613,712	+	dcp	OKGIIK_16465	0.18	-1.1
3,613,712	+	dcp	OKGIIK_16465	0.18	+0.4
3,613,821	+	dcp	OKGIIK_16465	0.23	-0.1
3,613,821	+	dcp	OKGIIK_16465	0.23	-0.3
3,613,821	+	dcp	OKGIIK_16465	0.23	+0.3
3,613,821	+	dcp	OKGIIK_16465	0.23	+1.6
3,613,821	+	dcp	OKGIIK_16465	0.23	-0.3
3,613,821	+	dcp	OKGIIK_16465	0.23	+1.3
3,613,821	+	dcp	OKGIIK_16465	0.23	-1.7
3,613,822	-	dcp	OKGIIK_16465	0.23	+1.0
3,613,822	-	dcp	OKGIIK_16465	0.23	-0.1
3,613,822	-	dcp	OKGIIK_16465	0.23	+2.3
3,613,822	-	dcp	OKGIIK_16465	0.23	+0.3
3,613,822	-	dcp	OKGIIK_16465	0.23	+0.7
3,613,822	-	dcp	OKGIIK_16465	0.23	+0.3
3,613,822	-	dcp	OKGIIK_16465	0.23	+0.7
3,613,822	-	dcp	OKGIIK_16465	0.23	-0.2
3,613,822	-	dcp	OKGIIK_16465	0.23	+0.3
3,613,822	-	dcp	OKGIIK_16465	0.23	+0.3
3,613,822	-	dcp	OKGIIK_16465	0.23	-0.1
3,613,822	-	dcp	OKGIIK_16465	0.23	-2.4
3,613,881	+	dcp	OKGIIK_16465	0.25	+1.3
3,613,881	+	dcp	OKGIIK_16465	0.25	+0.1
3,613,881	+	dcp	OKGIIK_16465	0.25	+0.1
3,613,881	+	dcp	OKGIIK_16465	0.25	+0.8
3,613,881	+	dcp	OKGIIK_16465	0.25	+0.8
3,613,881	+	dcp	OKGIIK_16465	0.25	+0.7
3,613,881	+	dcp	OKGIIK_16465	0.25	-1.7
3,613,881	+	dcp	OKGIIK_16465	0.25	+0.1
3,613,881	+	dcp	OKGIIK_16465	0.25	+0.3
3,613,881	+	dcp	OKGIIK_16465	0.25	+0.1
3,613,881	+	dcp	OKGIIK_16465	0.25	+1.3
3,613,882	-	dcp	OKGIIK_16465	0.25	-0.7
3,613,882	-	dcp	OKGIIK_16465	0.25	+1.1
3,613,882	-	dcp	OKGIIK_16465	0.25	+0.3
3,613,882	-	dcp	OKGIIK_16465	0.25	-2.1
3,613,882	-	dcp	OKGIIK_16465	0.25	-1.6
3,613,882	-	dcp	OKGIIK_16465	0.25	+0.3
3,613,882	-	dcp	OKGIIK_16465	0.25	-0.1
3,613,882	-	dcp	OKGIIK_16465	0.25	+1.3
3,613,882	-	dcp	OKGIIK_16465	0.25	-1.2
3,613,882	-	dcp	OKGIIK_16465	0.25	+1.3
3,613,882	-	dcp	OKGIIK_16465	0.25	+0.7
3,613,882	-	dcp	OKGIIK_16465	0.25	-0.1
3,613,882	-	dcp	OKGIIK_16465	0.25	+0.4
3,613,882	-	dcp	OKGIIK_16465	0.25	+0.4
3,613,882	-	dcp	OKGIIK_16465	0.25	-0.3
3,614,112	+	dcp	OKGIIK_16465	0.36	-0.0
3,614,112	+	dcp	OKGIIK_16465	0.36	+0.5
3,614,112	+	dcp	OKGIIK_16465	0.36	+0.8
3,614,112	+	dcp	OKGIIK_16465	0.36	+0.3
3,614,112	+	dcp	OKGIIK_16465	0.36	-0.1
3,614,112	+	dcp	OKGIIK_16465	0.36	-0.3
3,614,113	-	dcp	OKGIIK_16465	0.36	+0.1
3,614,113	-	dcp	OKGIIK_16465	0.36	+0.1
3,614,113	-	dcp	OKGIIK_16465	0.36	-0.1
3,614,113	-	dcp	OKGIIK_16465	0.36	+0.5
3,614,113	-	dcp	OKGIIK_16465	0.36	-1.1
3,614,113	-	dcp	OKGIIK_16465	0.36	+1.3
3,614,113	-	dcp	OKGIIK_16465	0.36	-0.6
3,614,113	-	dcp	OKGIIK_16465	0.36	+1.3
3,614,113	-	dcp	OKGIIK_16465	0.36	+0.4
3,614,113	-	dcp	OKGIIK_16465	0.36	-2.0
3,614,113	-	dcp	OKGIIK_16465	0.36	-0.7
3,614,113	-	dcp	OKGIIK_16465	0.36	-0.1
3,614,304	+	dcp	OKGIIK_16465	0.45	-1.1
3,614,305	-	dcp	OKGIIK_16465	0.45	-1.3
3,614,482	-	dcp	OKGIIK_16465	0.53	+0.6
3,614,482	-	dcp	OKGIIK_16465	0.53	+0.7
3,614,482	-	dcp	OKGIIK_16465	0.53	+0.4
3,614,482	-	dcp	OKGIIK_16465	0.53	-1.7
3,614,508	+	dcp	OKGIIK_16465	0.54	+0.6
3,614,508	+	dcp	OKGIIK_16465	0.54	+0.9
3,614,508	+	dcp	OKGIIK_16465	0.54	-0.9
3,614,508	+	dcp	OKGIIK_16465	0.54	-0.7
3,614,508	+	dcp	OKGIIK_16465	0.54	+2.3
3,614,508	+	dcp	OKGIIK_16465	0.54	+0.1
3,614,508	+	dcp	OKGIIK_16465	0.54	+1.3
3,614,508	+	dcp	OKGIIK_16465	0.54	-0.4
3,614,508	+	dcp	OKGIIK_16465	0.54	-0.6
3,614,508	+	dcp	OKGIIK_16465	0.54	+1.1
3,614,508	+	dcp	OKGIIK_16465	0.54	-0.9
3,614,508	+	dcp	OKGIIK_16465	0.54	+0.9
3,614,508	+	dcp	OKGIIK_16465	0.54	+0.7
3,614,508	+	dcp	OKGIIK_16465	0.54	+0.8
3,614,508	+	dcp	OKGIIK_16465	0.54	+2.0
3,614,509	-	dcp	OKGIIK_16465	0.54	+1.1
3,614,509	-	dcp	OKGIIK_16465	0.54	-0.2
3,614,509	-	dcp	OKGIIK_16465	0.54	-0.1
3,614,509	-	dcp	OKGIIK_16465	0.54	-2.6
3,614,509	-	dcp	OKGIIK_16465	0.54	+2.3
3,614,509	-	dcp	OKGIIK_16465	0.54	-0.3
3,614,509	-	dcp	OKGIIK_16465	0.54	+0.5
3,614,510	-	dcp	OKGIIK_16465	0.54	+0.7
3,614,538	+	dcp	OKGIIK_16465	0.55	+0.3
3,614,538	+	dcp	OKGIIK_16465	0.55	+0.1
3,614,538	+	dcp	OKGIIK_16465	0.55	+1.0
3,614,539	-	dcp	OKGIIK_16465	0.55	+0.4
3,614,539	-	dcp	OKGIIK_16465	0.55	+0.7
3,614,539	-	dcp	OKGIIK_16465	0.55	-0.7
3,614,539	-	dcp	OKGIIK_16465	0.55	-0.7
3,614,539	-	dcp	OKGIIK_16465	0.55	-0.5
3,614,577	+	dcp	OKGIIK_16465	0.57	+1.2
3,614,595	+	dcp	OKGIIK_16465	0.58	+1.5
3,614,595	+	dcp	OKGIIK_16465	0.58	+0.3
3,614,595	+	dcp	OKGIIK_16465	0.58	+0.6
3,614,595	+	dcp	OKGIIK_16465	0.58	+0.4
3,614,595	+	dcp	OKGIIK_16465	0.58	+1.0
3,614,596	-	dcp	OKGIIK_16465	0.58	+1.3
3,614,596	-	dcp	OKGIIK_16465	0.58	+0.3
3,614,596	-	dcp	OKGIIK_16465	0.58	+0.4
3,614,596	-	dcp	OKGIIK_16465	0.58	-0.2
3,614,596	-	dcp	OKGIIK_16465	0.58	-0.1
3,614,634	+	dcp	OKGIIK_16465	0.60	-1.3
3,614,635	-	dcp	OKGIIK_16465	0.60	-0.1
3,614,697	+	dcp	OKGIIK_16465	0.62	+0.5
3,614,697	+	dcp	OKGIIK_16465	0.62	-0.1
3,614,697	+	dcp	OKGIIK_16465	0.62	-0.2
3,614,697	+	dcp	OKGIIK_16465	0.62	+1.6
3,614,697	+	dcp	OKGIIK_16465	0.62	+1.5
3,614,697	+	dcp	OKGIIK_16465	0.62	+1.1
3,614,697	+	dcp	OKGIIK_16465	0.62	+1.5
3,614,697	+	dcp	OKGIIK_16465	0.62	+0.1
3,614,698	-	dcp	OKGIIK_16465	0.62	+0.3
3,614,698	-	dcp	OKGIIK_16465	0.62	+2.1
3,614,698	-	dcp	OKGIIK_16465	0.62	-0.7
3,614,698	-	dcp	OKGIIK_16465	0.62	+0.4
3,614,698	-	dcp	OKGIIK_16465	0.62	+2.3
3,614,698	-	dcp	OKGIIK_16465	0.62	+0.4
3,614,698	-	dcp	OKGIIK_16465	0.62	+2.3
3,614,698	-	dcp	OKGIIK_16465	0.62	+0.9
3,614,698	-	dcp	OKGIIK_16465	0.62	+1.0
3,614,706	+	dcp	OKGIIK_16465	0.63	+0.9
3,614,706	+	dcp	OKGIIK_16465	0.63	-0.6
3,614,707	-	dcp	OKGIIK_16465	0.63	-1.1
3,614,707	-	dcp	OKGIIK_16465	0.63	-0.1
3,614,707	-	dcp	OKGIIK_16465	0.63	-1.2
3,614,707	-	dcp	OKGIIK_16465	0.63	-0.9
3,614,916	+	dcp	OKGIIK_16465	0.72	-1.2
3,614,916	+	dcp	OKGIIK_16465	0.72	+0.9
3,615,004	+	dcp	OKGIIK_16465	0.76	+1.3
3,615,004	+	dcp	OKGIIK_16465	0.76	-0.9
3,615,004	+	dcp	OKGIIK_16465	0.76	+0.1
3,615,004	+	dcp	OKGIIK_16465	0.76	+0.7
3,615,004	+	dcp	OKGIIK_16465	0.76	+0.3
3,615,005	-	dcp	OKGIIK_16465	0.76	-0.9
3,615,016	-	dcp	OKGIIK_16465	0.77	+1.6
3,615,016	-	dcp	OKGIIK_16465	0.77	-0.7
3,615,016	-	dcp	OKGIIK_16465	0.77	-0.7
3,615,016	-	dcp	OKGIIK_16465	0.77	+0.1
3,615,027	+	dcp	OKGIIK_16465	0.77	+1.3
3,615,027	+	dcp	OKGIIK_16465	0.77	+1.5
3,615,028	-	dcp	OKGIIK_16465	0.78	-1.4
3,615,028	-	dcp	OKGIIK_16465	0.78	+0.3
3,615,028	-	dcp	OKGIIK_16465	0.78	+0.7
3,615,028	-	dcp	OKGIIK_16465	0.78	-0.9
3,615,099	+	dcp	OKGIIK_16465	0.81	+1.4
3,615,100	-	dcp	OKGIIK_16465	0.81	+0.3
3,615,100	-	dcp	OKGIIK_16465	0.81	-0.6
3,615,100	-	dcp	OKGIIK_16465	0.81	+0.3
3,615,100	-	dcp	OKGIIK_16465	0.81	-1.3
3,615,100	-	dcp	OKGIIK_16465	0.81	+2.7
3,615,100	-	dcp	OKGIIK_16465	0.81	+0.4
3,615,231	+	dcp	OKGIIK_16465	0.87	+0.5
3,615,231	+	dcp	OKGIIK_16465	0.87	-1.6
3,615,231	+	dcp	OKGIIK_16465	0.87	+0.8
3,615,231	+	dcp	OKGIIK_16465	0.87	-1.6
3,615,232	-	dcp	OKGIIK_16465	0.87	+1.3
3,615,232	-	dcp	OKGIIK_16465	0.87	-0.9
3,615,232	-	dcp	OKGIIK_16465	0.87	+0.1
3,615,232	-	dcp	OKGIIK_16465	0.87	-0.5
3,615,258	+	dcp	OKGIIK_16465	0.88	+0.3
3,615,258	+	dcp	OKGIIK_16465	0.88	+0.7
3,615,258	+	dcp	OKGIIK_16465	0.88	+0.4
3,615,259	-	dcp	OKGIIK_16465	0.88	+0.8
3,615,259	-	dcp	OKGIIK_16465	0.88	-1.1
3,615,259	-	dcp	OKGIIK_16465	0.88	-0.4
3,615,259	-	dcp	OKGIIK_16465	0.88	+0.3
3,615,259	-	dcp	OKGIIK_16465	0.88	-1.4
3,615,297	+	dcp	OKGIIK_16465	0.90	-0.1
3,615,297	+	dcp	OKGIIK_16465	0.90	+0.2
3,615,298	-	dcp	OKGIIK_16465	0.90	+0.3
3,615,298	-	dcp	OKGIIK_16465	0.90	-0.9
3,615,300	+	dcp	OKGIIK_16465	0.90	-0.2
3,615,300	+	dcp	OKGIIK_16465	0.90	-0.7
3,615,300	+	dcp	OKGIIK_16465	0.90	+1.3
3,615,300	+	dcp	OKGIIK_16465	0.90	-0.3
3,615,300	+	dcp	OKGIIK_16465	0.90	-0.6
3,615,300	+	dcp	OKGIIK_16465	0.90	-0.7
3,615,300	+	dcp	OKGIIK_16465	0.90	+0.3
3,615,301	-	dcp	OKGIIK_16465	0.90	+0.8
3,615,301	-	dcp	OKGIIK_16465	0.90	+0.7
3,615,301	-	dcp	OKGIIK_16465	0.90	-0.6
3,615,301	-	dcp	OKGIIK_16465	0.90	-0.6
3,615,301	-	dcp	OKGIIK_16465	0.90	-0.6
3,615,301	-	dcp	OKGIIK_16465	0.90	-0.1
3,615,301	-	dcp	OKGIIK_16465	0.90	+1.3
3,615,301	-	dcp	OKGIIK_16465	0.90	-1.1
3,615,301	-	dcp	OKGIIK_16465	0.90	+0.6
3,615,301	-	dcp	OKGIIK_16465	0.90	+0.4
3,615,301	-	dcp	OKGIIK_16465	0.90	+0.7
3,615,301	-	dcp	OKGIIK_16465	0.90	+0.5
3,615,301	-	dcp	OKGIIK_16465	0.90	+0.1
3,615,306	+				+2.6
3,615,306	+				-0.1
3,615,306	+				-0.4
3,615,306	+				+1.0
3,615,306	+				-0.4
3,615,306	+				+1.3
3,615,307	-				+0.4
3,615,307	-				+2.6
3,615,307	-				+0.4
3,615,307	-				-0.3
3,615,307	-				-0.9
3,615,441	+				-1.1
3,615,441	+				+0.7
3,615,441	+				-0.3
3,615,442	-				+0.1
3,615,442	-				+2.3
3,615,442	-				+0.3
3,615,442	-				+1.3
3,615,442	-				+0.0
3,615,442	-				+0.7
3,615,637	+				+1.8
3,615,647	+				-0.3
3,615,774	-				+0.7
3,615,989	+	kch	OKGIIK_16470	0.17	+0.1
3,615,989	+	kch	OKGIIK_16470	0.17	+0.4
3,615,990	-	kch	OKGIIK_16470	0.17	-0.2
3,615,990	-	kch	OKGIIK_16470	0.17	-0.3
3,615,990	-	kch	OKGIIK_16470	0.17	-0.8
3,615,990	-	kch	OKGIIK_16470	0.17	+0.4
3,615,990	-	kch	OKGIIK_16470	0.17	-0.3
3,615,990	-	kch	OKGIIK_16470	0.17	-1.2
3,616,106	+	kch	OKGIIK_16470	0.24	-1.5
3,616,107	-	kch	OKGIIK_16470	0.24	+1.0
3,616,440	-	kch	OKGIIK_16470	0.42	-0.1