Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16420

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,606,877	+				-1.9
3,606,877	+				+0.9
3,606,877	+				-0.1
3,606,877	+				+0.8
3,606,877	+				+0.7
3,606,902	+				-0.1
3,606,902	+				-1.4
3,606,902	+				+0.1
3,606,902	+				+2.3
3,606,902	+				-0.3
3,606,902	+				+0.7
3,606,902	+				-0.1
3,606,902	+				-1.7
3,606,903	-				-1.1
3,606,903	-				-0.6
3,606,903	-				+0.3
3,606,903	-				+1.0
3,606,903	-				-0.2
3,606,903	-				-0.6
3,606,903	-				-0.1
3,606,903	-				-0.6
3,606,903	-				-1.2
3,606,903	-				-0.2
3,606,903	-				-0.1
3,606,903	-				-0.1
3,606,903	-				+0.1
3,606,903	-				+0.3
3,606,903	-				+0.6
3,606,903	-				-0.6
3,606,903	-				+0.9
3,606,903	-				+0.3
3,606,906	+				-1.2
3,606,906	+				-0.3
3,606,906	+				+0.4
3,606,907	-				+0.4
3,606,907	-				+1.1
3,606,907	-				+1.3
3,606,907	-				+2.6
3,606,907	-				-1.7
3,606,955	-		OKGIIK_16420	0.10	-0.2
3,607,012	+		OKGIIK_16420	0.25	+0.4
3,607,012	+		OKGIIK_16420	0.25	+1.1
3,607,013	-		OKGIIK_16420	0.26	+0.5
3,607,013	-		OKGIIK_16420	0.26	+0.5
3,607,013	-		OKGIIK_16420	0.26	-0.5
3,607,013	-		OKGIIK_16420	0.26	-0.1
3,607,013	-		OKGIIK_16420	0.26	-1.7
3,607,013	-		OKGIIK_16420	0.26	-0.2
3,607,013	-		OKGIIK_16420	0.26	+1.3
3,607,013	-		OKGIIK_16420	0.26	+1.3
3,607,013	-		OKGIIK_16420	0.26	+0.9
3,607,013	-		OKGIIK_16420	0.26	+0.7
3,607,013	-		OKGIIK_16420	0.26	+1.3
3,607,114	+		OKGIIK_16420	0.52	+0.3
3,607,114	+		OKGIIK_16420	0.52	+1.7
3,607,114	+		OKGIIK_16420	0.52	+0.7
3,607,114	+		OKGIIK_16420	0.52	+0.1
3,607,114	+		OKGIIK_16420	0.52	-1.3
3,607,547	-	elsH	OKGIIK_16425	0.31	+0.3
3,607,852	-	elsH	OKGIIK_16425	0.69	+1.4
3,607,852	-	elsH	OKGIIK_16425	0.69	+0.4
3,607,852	-	elsH	OKGIIK_16425	0.69	+1.7
3,607,931	+	elsH	OKGIIK_16425	0.78	-1.8
3,607,931	+	elsH	OKGIIK_16425	0.78	-1.1
3,607,931	+	elsH	OKGIIK_16425	0.78	-0.3
3,607,931	+	elsH	OKGIIK_16425	0.78	-1.9
3,607,931	+	elsH	OKGIIK_16425	0.78	-1.1
3,607,931	+	elsH	OKGIIK_16425	0.78	-1.8
3,607,931	+	elsH	OKGIIK_16425	0.78	+0.1
3,607,931	+	elsH	OKGIIK_16425	0.78	-0.1
3,607,932	-	elsH	OKGIIK_16425	0.78	-0.3
3,607,932	-	elsH	OKGIIK_16425	0.78	+0.7
3,607,932	-	elsH	OKGIIK_16425	0.78	-0.3
3,607,932	-	elsH	OKGIIK_16425	0.78	+2.3
3,607,932	-	elsH	OKGIIK_16425	0.78	+0.3
3,608,004	+	elsH	OKGIIK_16425	0.87	+0.7
3,608,004	+	elsH	OKGIIK_16425	0.87	+1.3
3,608,004	+	elsH	OKGIIK_16425	0.87	-0.2
3,608,004	+	elsH	OKGIIK_16425	0.87	+1.1
3,608,004	+	elsH	OKGIIK_16425	0.87	-1.3
3,608,004	+	elsH	OKGIIK_16425	0.87	+0.4
3,608,004	+	elsH	OKGIIK_16425	0.87	-1.8
3,608,004	+	elsH	OKGIIK_16425	0.87	-0.6
3,608,005	-	elsH	OKGIIK_16425	0.87	-0.4
3,608,005	-	elsH	OKGIIK_16425	0.87	+0.3
3,608,005	-	elsH	OKGIIK_16425	0.87	-1.3
3,608,005	-	elsH	OKGIIK_16425	0.87	-2.3
3,608,005	-	elsH	OKGIIK_16425	0.87	-0.6
3,608,005	-	elsH	OKGIIK_16425	0.87	+0.5
3,608,005	-	elsH	OKGIIK_16425	0.87	-0.6
3,608,005	-	elsH	OKGIIK_16425	0.87	-1.4
3,608,013	+	elsH	OKGIIK_16425	0.88	-0.1
3,608,217	+				-0.3
3,608,217	+				+2.3
3,608,217	+				-0.1
3,608,217	+				+1.3
3,608,217	+				-0.1
3,608,217	+				+1.4
3,608,217	+				+1.5
3,608,217	+				-1.2
3,608,217	+				-1.3
3,608,217	+				+1.6
3,608,217	+				+1.6
3,608,217	+				-0.2
3,608,217	+				+1.4
3,608,217	+				-1.1
3,608,217	+				+1.8
3,608,217	+				+1.3
3,608,217	+				+1.1
3,608,217	+				-0.7
3,608,217	+				-0.1
3,608,217	+				-0.1
3,608,217	+				+0.3
3,608,217	+				+1.3
3,608,217	+				-0.3
3,608,217	+				-1.1
3,608,217	+				-0.1
3,608,217	+				+0.3
3,608,217	+				-0.1
3,608,217	+				+2.1
3,608,217	+				-0.1
3,608,217	+				+2.6
3,608,218	-				-0.6
3,608,218	-				-1.9
3,608,218	-				+0.8
3,608,218	-				+0.7
3,608,218	-				+0.3
3,608,218	-				+0.7
3,608,218	-				-1.4
3,608,218	-				-0.3
3,608,218	-				+0.3
3,608,218	-				+0.3
3,608,218	-				-0.7
3,608,218	-				+0.8
3,608,218	-				-0.3
3,608,218	-				+0.2
3,608,218	-				+0.9
3,608,218	-				-0.9
3,608,218	-				+0.3
3,608,218	-				+0.3
3,608,298	+		OKGIIK_16430	0.13	-1.9
3,608,298	+		OKGIIK_16430	0.13	-1.1
3,608,298	+		OKGIIK_16430	0.13	-0.1
3,608,298	+		OKGIIK_16430	0.13	-0.1
3,608,298	+		OKGIIK_16430	0.13	-0.1
3,608,298	+		OKGIIK_16430	0.13	+0.8
3,608,298	+		OKGIIK_16430	0.13	+0.4