Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16300

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,577,904	+		OKGIIK_16295	0.29	-0.1
3,577,904	+		OKGIIK_16295	0.29	-0.1
3,577,904	+		OKGIIK_16295	0.29	-0.9
3,577,905	-		OKGIIK_16295	0.29	-0.9
3,577,905	-		OKGIIK_16295	0.29	+0.7
3,577,905	-		OKGIIK_16295	0.29	-0.1
3,577,905	-		OKGIIK_16295	0.29	-1.4
3,577,905	-		OKGIIK_16295	0.29	+0.4
3,577,905	-		OKGIIK_16295	0.29	-1.1
3,577,905	-		OKGIIK_16295	0.29	+1.3
3,577,905	-		OKGIIK_16295	0.29	+1.3
3,578,114	+		OKGIIK_16295	0.51	-0.1
3,578,114	+		OKGIIK_16295	0.51	+0.4
3,578,114	+		OKGIIK_16295	0.51	-1.6
3,578,114	+		OKGIIK_16295	0.51	-1.5
3,578,114	+		OKGIIK_16295	0.51	-1.2
3,578,114	+		OKGIIK_16295	0.51	-0.7
3,578,115	-		OKGIIK_16295	0.51	-0.1
3,578,115	-		OKGIIK_16295	0.51	+1.8
3,578,115	-		OKGIIK_16295	0.51	+0.7
3,578,115	-		OKGIIK_16295	0.51	-1.3
3,578,115	-		OKGIIK_16295	0.51	+1.7
3,578,115	-		OKGIIK_16295	0.51	-1.6
3,578,115	-		OKGIIK_16295	0.51	+0.4
3,578,115	-		OKGIIK_16295	0.51	-0.7
3,578,174	+		OKGIIK_16295	0.57	-0.6
3,578,393	+		OKGIIK_16295	0.80	+0.3
3,578,393	+		OKGIIK_16295	0.80	-0.6
3,578,393	+		OKGIIK_16295	0.80	+0.9
3,578,393	+		OKGIIK_16295	0.80	+2.3
3,578,393	+		OKGIIK_16295	0.80	+1.0
3,578,394	-		OKGIIK_16295	0.80	+1.1
3,578,394	-		OKGIIK_16295	0.80	-1.1
3,578,394	-		OKGIIK_16295	0.80	+1.0
3,578,394	-		OKGIIK_16295	0.80	-0.3
3,578,394	-		OKGIIK_16295	0.80	+0.9
3,578,394	-		OKGIIK_16295	0.80	-0.6
3,578,394	-		OKGIIK_16295	0.80	+1.3
3,578,394	-		OKGIIK_16295	0.80	+0.4
3,578,394	-		OKGIIK_16295	0.80	+0.1
3,578,394	-		OKGIIK_16295	0.80	-0.7
3,578,394	-		OKGIIK_16295	0.80	-0.7
3,578,394	-		OKGIIK_16295	0.80	-0.2
3,578,394	-		OKGIIK_16295	0.80	+0.0
3,578,394	-		OKGIIK_16295	0.80	-1.4
3,578,394	-		OKGIIK_16295	0.80	+1.0
3,578,396	+		OKGIIK_16295	0.80	-0.2
3,578,396	+		OKGIIK_16295	0.80	-0.8
3,578,396	+		OKGIIK_16295	0.80	-0.3
3,578,396	+		OKGIIK_16295	0.80	-1.0
3,578,396	+		OKGIIK_16295	0.80	-0.1
3,578,396	+		OKGIIK_16295	0.80	+0.0
3,578,396	+		OKGIIK_16295	0.80	+0.6
3,578,397	-		OKGIIK_16295	0.80	+0.1
3,578,397	-		OKGIIK_16295	0.80	-0.1
3,578,397	-		OKGIIK_16295	0.80	+0.3
3,578,397	-		OKGIIK_16295	0.80	-1.1
3,578,397	-		OKGIIK_16295	0.80	+0.2
3,578,397	-		OKGIIK_16295	0.80	-0.6
3,578,397	-		OKGIIK_16295	0.80	-2.4
3,578,397	-		OKGIIK_16295	0.80	-0.3
3,578,397	-		OKGIIK_16295	0.80	+0.9
3,578,397	-		OKGIIK_16295	0.80	-1.3
3,578,397	-		OKGIIK_16295	0.80	-0.3
3,578,551	+				+0.1
3,578,551	+				-0.7
3,578,551	+				-1.3
3,578,551	+				-0.9
3,578,552	-				-2.4
3,578,552	-				-1.7
3,578,552	-				-1.1
3,578,552	-				+5.3
3,578,552	-				+1.3
3,578,552	-				-1.0
3,578,552	-				-0.1
3,578,552	-				+1.6
3,578,552	-				-1.6
3,578,552	-				-1.7
3,578,552	-				-0.6
3,578,552	-				-0.3
3,578,552	-				+0.3
3,578,552	-				-1.8
3,578,564	+				+0.1
3,578,564	+				-0.9
3,578,564	+				-0.1
3,578,564	+				-0.6
3,578,564	+				+1.8
3,578,564	+				-0.9
3,578,564	+				+1.0
3,578,564	+				+0.9
3,578,564	+				+0.7
3,578,565	-				+0.3
3,578,565	-				-1.9
3,578,565	-				-0.6
3,578,565	-				+0.4
3,578,565	-				-0.4
3,578,565	-				+0.6
3,578,565	-				-1.1
3,578,565	-				-1.2
3,578,565	-				+3.1
3,578,565	-				-1.1
3,578,565	-				+1.2
3,578,567	+				+0.1
3,578,567	+				+0.3
3,578,567	+				+0.3
3,578,567	+				-0.3
3,578,567	+				+0.3
3,578,567	+				+0.4
3,578,567	+				+1.7
3,578,567	+				-0.1
3,578,567	+				-1.2
3,578,567	+				+0.9
3,578,567	+				-1.8
3,578,567	+				+1.3
3,578,567	+				+0.4
3,578,567	+				-1.7
3,578,567	+				-1.4
3,578,567	+				-0.1
3,578,567	+				+0.1
3,578,567	+				-0.1
3,578,567	+				+1.8
3,578,567	+				-0.9
3,578,567	+				-0.1
3,578,567	+				-0.1
3,578,567	+				+0.3
3,578,567	+				+0.3
3,578,567	+				+0.3
3,578,567	+				+0.3
3,578,567	+				+0.1
3,578,567	+				-0.6
3,578,567	+				+1.3
3,578,567	+				-0.8
3,578,567	+				+0.8
3,578,567	+				-0.1
3,578,567	+				+0.9
3,578,567	+				+0.9
3,578,567	+				+0.2
3,578,567	+				+0.3
3,578,567	+				-0.2
3,578,567	+				+1.0
3,578,568	-				-1.7
3,578,568	-				-0.7
3,578,568	-				+0.0
3,578,568	-				-0.1
3,578,568	-				+1.3
3,578,568	-				-0.7
3,578,568	-				-0.3
3,578,568	-				-0.9
3,578,568	-				-0.1
3,578,568	-				+0.4
3,578,568	-				-0.1
3,578,568	-				-2.4
3,578,568	-				-0.3
3,578,568	-				-1.2
3,578,568	-				-0.9
3,578,568	-				-0.3
3,578,568	-				-1.1
3,578,568	-				-1.1
3,578,568	-				-0.3
3,578,568	-				+0.9
3,578,568	-				-0.6
3,578,568	-				-0.7
3,578,568	-				-1.7
3,578,568	-				-1.9
3,578,568	-				+1.1
3,578,568	-				-1.1
3,578,568	-				-1.6
3,578,568	-				-0.0
3,578,568	-				-0.3
3,578,568	-				+0.9
3,578,568	-				-0.6
3,578,568	-				-0.7
3,578,568	-				-1.2
3,578,568	-				+0.3
3,578,625	+				-1.2
3,578,625	+				-0.9
3,578,625	+				-0.3
3,578,626	-				-0.0
3,578,626	-				-1.1
3,578,626	-				+1.3
3,578,626	-				+0.3
3,578,637	+				-0.6
3,578,637	+				-1.7
3,578,637	+				-0.5
3,578,638	-				-0.6
3,578,688	+				-0.0
3,578,688	+				-0.3
3,578,689	-				+0.4
3,578,689	-				+0.4
3,578,709	+				+0.4
3,578,709	+				-0.5
3,578,709	+				-1.7
3,578,709	+				+0.7
3,578,709	+				+0.6
3,578,709	+				+0.9
3,578,709	+				+1.3
3,578,709	+				+1.3
3,578,710	-				+0.3
3,578,710	-				+0.6
3,578,710	-				-2.4
3,578,710	-				+0.9
3,578,710	-				-1.3
3,578,710	-				-0.4
3,578,710	-				-0.1
3,578,710	-				-1.3
3,578,710	-				+0.5
3,578,710	-				-1.9
3,578,710	-				-0.9
3,578,710	-				-0.1
3,578,734	+				+0.3
3,578,734	+				+1.3
3,578,734	+				+0.3
3,578,734	+				+1.8
3,578,734	+				-1.7
3,578,734	+				+2.6
3,578,734	+				+0.9
3,578,734	+				+0.9
3,578,734	+				-1.3
3,578,734	+				+0.4
3,578,735	-				-0.7
3,578,735	-				-0.7
3,578,735	-				-0.9
3,578,735	-				-1.2
3,578,735	-				+0.5
3,578,735	-				-1.0
3,578,822	-				-0.9
3,578,875	+				-0.4
3,578,875	+				-1.8
3,578,875	+				-1.8
3,578,875	+				-1.1
3,578,875	+				-0.9
3,578,875	+				+0.9
3,578,875	+				+0.7
3,578,875	+				+0.3
3,578,875	+				-0.7
3,578,875	+				+1.5
3,578,875	+				+0.9
3,578,876	-				-0.1
3,578,876	-				-1.0
3,578,876	-				-0.5
3,578,876	-				+0.3
3,578,876	-				+1.3
3,578,876	-				-0.9
3,579,681	+		OKGIIK_16300	0.74	+1.1
3,579,681	+		OKGIIK_16300	0.74	+0.4
3,579,681	+		OKGIIK_16300	0.74	-0.9
3,579,681	+		OKGIIK_16300	0.74	+0.8
3,579,681	+		OKGIIK_16300	0.74	+0.3
3,579,681	+		OKGIIK_16300	0.74	+1.0
3,579,681	+		OKGIIK_16300	0.74	+0.9
3,579,682	-		OKGIIK_16300	0.74	+0.7
3,579,682	-		OKGIIK_16300	0.74	+0.3
3,579,682	-		OKGIIK_16300	0.74	+2.0
3,579,682	-		OKGIIK_16300	0.74	+0.7
3,579,682	-		OKGIIK_16300	0.74	+0.5
3,579,682	-		OKGIIK_16300	0.74	+0.1
3,579,682	-		OKGIIK_16300	0.74	-1.2
3,579,682	-		OKGIIK_16300	0.74	+0.6
3,579,682	-		OKGIIK_16300	0.74	-1.1
3,579,682	-		OKGIIK_16300	0.74	+0.4
3,579,682	-		OKGIIK_16300	0.74	+0.9
3,579,682	-		OKGIIK_16300	0.74	+1.1
3,579,682	-		OKGIIK_16300	0.74	+0.4
3,579,682	-		OKGIIK_16300	0.74	+0.3
3,580,088	+				-0.6
3,580,088	+				-1.2
3,580,088	+				-0.1
3,580,089	-				-0.3
3,580,165	-				-1.2
3,580,165	-				-0.4
3,580,191	+				-0.1
3,580,191	+				+0.0
3,580,191	+				-1.3
3,580,191	+				+0.7
3,580,191	+				-1.9
3,580,191	+				-0.7
3,580,191	+				+0.7
3,580,191	+				+0.1
3,580,191	+				+1.3
3,580,191	+				+1.4
3,580,191	+				+0.7
3,580,191	+				-2.7
3,580,192	-				+0.3
3,580,192	-				+0.3
3,580,192	-				-0.2
3,580,192	-				-0.1
3,580,192	-				-0.1
3,580,192	-				+0.4
3,580,192	-				-0.1
3,580,192	-				-0.9
3,580,192	-				-0.1
3,580,192	-				-3.0
3,580,192	-				+1.1
3,580,192	-				-0.1
3,580,192	-				-0.7
3,580,233	+				-0.3
3,580,233	+				+0.3
3,580,233	+				-0.3
3,580,233	+				+0.4
3,580,233	+				-1.2
3,580,234	-				+0.4
3,580,234	-				+0.3
3,580,234	-				-0.2
3,580,234	-				+0.8
3,580,290	+		OKGIIK_16305	0.11	-0.9
3,580,290	+		OKGIIK_16305	0.11	-0.1
3,580,290	+		OKGIIK_16305	0.11	-0.8
3,580,290	+		OKGIIK_16305	0.11	-0.4
3,580,290	+		OKGIIK_16305	0.11	+0.3
3,580,290	+		OKGIIK_16305	0.11	+1.8
3,580,290	+		OKGIIK_16305	0.11	+0.5
3,580,290	+		OKGIIK_16305	0.11	-1.9
3,580,290	+		OKGIIK_16305	0.11	-2.0
3,580,290	+		OKGIIK_16305	0.11	-0.2
3,580,290	+		OKGIIK_16305	0.11	+1.4
3,580,290	+		OKGIIK_16305	0.11	-0.6
3,580,290	+		OKGIIK_16305	0.11	+1.0
3,580,291	-		OKGIIK_16305	0.11	-0.1
3,580,291	-		OKGIIK_16305	0.11	+0.9
3,580,291	-		OKGIIK_16305	0.11	-2.0
3,580,291	-		OKGIIK_16305	0.11	+0.8
3,580,291	-		OKGIIK_16305	0.11	-1.4
3,580,291	-		OKGIIK_16305	0.11	-0.9
3,580,291	-		OKGIIK_16305	0.11	-0.6
3,580,291	-		OKGIIK_16305	0.11	+0.7
3,580,291	-		OKGIIK_16305	0.11	-0.1
3,580,291	-		OKGIIK_16305	0.11	+0.3
3,580,291	-		OKGIIK_16305	0.11	-0.7
3,580,291	-		OKGIIK_16305	0.11	+1.3
3,580,314	+		OKGIIK_16305	0.12	+0.4
3,580,314	+		OKGIIK_16305	0.12	-0.7
3,580,347	+		OKGIIK_16305	0.14	-2.8
3,580,347	+		OKGIIK_16305	0.14	+0.7
3,580,347	+		OKGIIK_16305	0.14	-1.8
3,580,348	-		OKGIIK_16305	0.14	-1.7
3,580,348	-		OKGIIK_16305	0.14	-1.6
3,580,348	-		OKGIIK_16305	0.14	-1.4
3,580,348	-		OKGIIK_16305	0.14	-0.7
3,580,348	-		OKGIIK_16305	0.14	-1.8
3,580,348	-		OKGIIK_16305	0.14	+0.2
3,580,360	-		OKGIIK_16305	0.14	-0.2
3,580,360	-		OKGIIK_16305	0.14	+1.0
3,580,431	+		OKGIIK_16305	0.17	+0.7
3,580,431	+		OKGIIK_16305	0.17	+0.3
3,580,431	+		OKGIIK_16305	0.17	-1.1
3,580,431	+		OKGIIK_16305	0.17	+0.3
3,580,431	+		OKGIIK_16305	0.17	+0.2
3,580,431	+		OKGIIK_16305	0.17	+0.6
3,580,431	+		OKGIIK_16305	0.17	-0.0
3,580,431	+		OKGIIK_16305	0.17	-0.1
3,580,432	-		OKGIIK_16305	0.17	-2.4
3,580,432	-		OKGIIK_16305	0.17	-1.3
3,580,432	-		OKGIIK_16305	0.17	-0.5
3,580,432	-		OKGIIK_16305	0.17	-1.4
3,580,432	-		OKGIIK_16305	0.17	+0.3
3,580,432	-		OKGIIK_16305	0.17	+1.1
3,580,432	-		OKGIIK_16305	0.17	-0.3
3,580,432	-		OKGIIK_16305	0.17	-0.7
3,580,432	-		OKGIIK_16305	0.17	-0.6
3,580,432	-		OKGIIK_16305	0.17	-0.1
3,580,432	-		OKGIIK_16305	0.17	-1.3
3,580,477	-		OKGIIK_16305	0.19	+0.8
3,580,477	-		OKGIIK_16305	0.19	-0.1
3,580,477	-		OKGIIK_16305	0.19	+0.4
3,580,497	+		OKGIIK_16305	0.19	-0.1
3,580,497	+		OKGIIK_16305	0.19	+0.1
3,580,498	-		OKGIIK_16305	0.19	-1.2
3,580,498	-		OKGIIK_16305	0.19	+0.3
3,580,498	-		OKGIIK_16305	0.19	-1.2
3,580,541	+		OKGIIK_16305	0.21	-0.1
3,580,541	+		OKGIIK_16305	0.21	+0.7
3,580,541	+		OKGIIK_16305	0.21	+0.7
3,580,542	-		OKGIIK_16305	0.21	+0.4
3,580,542	-		OKGIIK_16305	0.21	+0.9
3,580,542	-		OKGIIK_16305	0.21	+0.3
3,580,542	-		OKGIIK_16305	0.21	-0.7
3,580,542	-		OKGIIK_16305	0.21	+0.3
3,580,542	-		OKGIIK_16305	0.21	+0.9
3,580,542	-		OKGIIK_16305	0.21	-0.2
3,580,542	-		OKGIIK_16305	0.21	+1.3
3,580,560	+		OKGIIK_16305	0.22	-0.3
3,580,560	+		OKGIIK_16305	0.22	+0.1
3,580,710	+		OKGIIK_16305	0.27	+0.4
3,580,710	+		OKGIIK_16305	0.27	+1.3
3,580,710	+		OKGIIK_16305	0.27	-1.9
3,580,874	+		OKGIIK_16305	0.34	+0.7
3,580,926	+		OKGIIK_16305	0.36	-1.5
3,580,926	+		OKGIIK_16305	0.36	+0.7
3,580,926	+		OKGIIK_16305	0.36	+0.4
3,580,926	+		OKGIIK_16305	0.36	-0.4
3,580,926	+		OKGIIK_16305	0.36	-0.2
3,580,926	+		OKGIIK_16305	0.36	-0.6
3,580,926	+		OKGIIK_16305	0.36	-0.7
3,580,926	+		OKGIIK_16305	0.36	-1.1
3,580,926	+		OKGIIK_16305	0.36	-0.6
3,580,926	+		OKGIIK_16305	0.36	+0.3
3,580,926	+		OKGIIK_16305	0.36	+0.9
3,580,927	-		OKGIIK_16305	0.36	+0.4
3,580,927	-		OKGIIK_16305	0.36	-1.2
3,580,927	-		OKGIIK_16305	0.36	+0.3
3,580,927	-		OKGIIK_16305	0.36	+1.0
3,580,927	-		OKGIIK_16305	0.36	+0.7
3,580,927	-		OKGIIK_16305	0.36	-1.2
3,580,927	-		OKGIIK_16305	0.36	+0.8
3,580,927	-		OKGIIK_16305	0.36	+0.3
3,580,927	-		OKGIIK_16305	0.36	+1.8
3,580,927	-		OKGIIK_16305	0.36	-1.9
3,580,927	-		OKGIIK_16305	0.36	+1.9