Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16255

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,562,318	+		OKGIIK_16250	0.38	+0.3
3,562,318	+		OKGIIK_16250	0.38	-0.1
3,562,318	+		OKGIIK_16250	0.38	-0.6
3,562,318	+		OKGIIK_16250	0.38	-0.9
3,562,318	+		OKGIIK_16250	0.38	+0.4
3,562,318	+		OKGIIK_16250	0.38	+2.8
3,562,318	+		OKGIIK_16250	0.38	-0.4
3,562,318	+		OKGIIK_16250	0.38	-0.3
3,562,318	+		OKGIIK_16250	0.38	+0.2
3,562,318	+		OKGIIK_16250	0.38	-0.7
3,562,318	+		OKGIIK_16250	0.38	-0.9
3,562,318	+		OKGIIK_16250	0.38	-1.4
3,562,319	-		OKGIIK_16250	0.38	-2.6
3,562,319	-		OKGIIK_16250	0.38	+0.9
3,562,319	-		OKGIIK_16250	0.38	+1.8
3,562,319	-		OKGIIK_16250	0.38	-0.3
3,562,319	-		OKGIIK_16250	0.38	-1.4
3,562,319	-		OKGIIK_16250	0.38	+0.4
3,562,321	+		OKGIIK_16250	0.38	+0.1
3,562,321	+		OKGIIK_16250	0.38	-0.7
3,562,321	+		OKGIIK_16250	0.38	-1.4
3,562,321	+		OKGIIK_16250	0.38	-0.2
3,562,321	+		OKGIIK_16250	0.38	+0.7
3,562,321	+		OKGIIK_16250	0.38	-0.1
3,562,321	+		OKGIIK_16250	0.38	-1.8
3,562,321	+		OKGIIK_16250	0.38	-0.1
3,562,321	+		OKGIIK_16250	0.38	+0.9
3,562,321	+		OKGIIK_16250	0.38	+0.3
3,562,321	+		OKGIIK_16250	0.38	+1.5
3,562,321	+		OKGIIK_16250	0.38	+0.9
3,562,321	+		OKGIIK_16250	0.38	-0.1
3,562,321	+		OKGIIK_16250	0.38	-0.1
3,562,321	+		OKGIIK_16250	0.38	-0.2
3,562,322	-		OKGIIK_16250	0.38	-0.7
3,562,322	-		OKGIIK_16250	0.38	+0.5
3,562,322	-		OKGIIK_16250	0.38	-0.2
3,562,322	-		OKGIIK_16250	0.38	+1.0
3,562,322	-		OKGIIK_16250	0.38	+0.5
3,562,322	-		OKGIIK_16250	0.38	-1.5
3,562,740	+		OKGIIK_16250	0.74	+0.7
3,562,740	+		OKGIIK_16250	0.74	+1.3
3,562,740	+		OKGIIK_16250	0.74	+0.2
3,562,741	-		OKGIIK_16250	0.75	-0.6
3,562,741	-		OKGIIK_16250	0.75	+0.3
3,562,741	-		OKGIIK_16250	0.75	+0.3
3,562,741	-		OKGIIK_16250	0.75	-1.3
3,562,963	+				-1.1
3,562,963	+				+0.5
3,562,963	+				+0.3
3,562,963	+				+0.4
3,562,963	+				-0.2
3,562,963	+				+2.3
3,562,963	+				+0.7
3,562,963	+				-1.7
3,562,963	+				+1.8
3,562,963	+				-0.3
3,562,963	+				-0.9
3,562,963	+				+0.3
3,562,963	+				+1.1
3,562,963	+				+0.7
3,562,963	+				+0.1
3,562,964	-				-0.7
3,562,964	-				+0.3
3,562,964	-				-0.9
3,562,964	-				+0.1
3,562,964	-				-0.1
3,562,964	-				+0.3
3,562,964	-				-0.3
3,562,964	-				-0.5
3,562,964	-				-1.0
3,562,964	-				-0.6
3,562,964	-				-1.2
3,563,109	+	gspM	OKGIIK_16255	0.12	+0.5
3,563,109	+	gspM	OKGIIK_16255	0.12	+0.9
3,563,109	+	gspM	OKGIIK_16255	0.12	+2.0
3,563,110	-	gspM	OKGIIK_16255	0.12	-0.7
3,563,110	-	gspM	OKGIIK_16255	0.12	+0.3
3,563,110	-	gspM	OKGIIK_16255	0.12	-0.7
3,563,110	-	gspM	OKGIIK_16255	0.12	-0.7
3,563,110	-	gspM	OKGIIK_16255	0.12	-0.1
3,563,110	-	gspM	OKGIIK_16255	0.12	+1.3
3,563,110	-	gspM	OKGIIK_16255	0.12	+0.8
3,563,511	+	gspM	OKGIIK_16255	0.74	+0.7
3,563,511	+	gspM	OKGIIK_16255	0.74	+0.8
3,563,511	+	gspM	OKGIIK_16255	0.74	+0.9
3,563,511	+	gspM	OKGIIK_16255	0.74	+0.3
3,563,512	-	gspM	OKGIIK_16255	0.74	+0.4
3,563,512	-	gspM	OKGIIK_16255	0.74	+0.3
3,563,512	-	gspM	OKGIIK_16255	0.74	-1.4
3,563,512	-	gspM	OKGIIK_16255	0.74	-0.8
3,563,538	+	gspM	OKGIIK_16255	0.78	+0.1
3,563,538	+	gspM	OKGIIK_16255	0.78	+0.9
3,563,538	+	gspM	OKGIIK_16255	0.78	+0.9
3,563,539	-	gspM	OKGIIK_16255	0.78	-2.7
3,563,539	-	gspM	OKGIIK_16255	0.78	+0.8
3,563,539	-	gspM	OKGIIK_16255	0.78	+0.5
3,563,539	-	gspM	OKGIIK_16255	0.78	+0.7
3,563,608	-	gspM	OKGIIK_16255	0.89	-0.0
3,563,608	-	gspM	OKGIIK_16255	0.89	+0.2
3,563,608	-	gspM	OKGIIK_16255	0.89	-0.4
3,563,864	+		OKGIIK_16260	0.26	-0.9
3,563,864	+		OKGIIK_16260	0.26	-0.1
3,563,864	+		OKGIIK_16260	0.26	-0.8
3,563,864	+		OKGIIK_16260	0.26	-0.3
3,563,865	-		OKGIIK_16260	0.26	-0.7
3,563,865	-		OKGIIK_16260	0.26	-0.9
3,564,396	+				+1.0
3,564,396	+				+0.2
3,564,396	+				-1.9
3,564,396	+				-0.0
3,564,397	-				-0.3
3,564,397	-				+0.0
3,564,397	-				-0.4
3,564,421	+				-1.2
3,564,421	+				+0.6
3,564,421	+				-0.1
3,564,421	+				-2.0
3,564,421	+				+0.4
3,564,421	+				-0.7
3,564,421	+				+0.4
3,564,421	+				-0.0
3,564,421	+				-0.9
3,564,421	+				+1.3
3,564,422	-				-1.0
3,564,422	-				-0.1
3,564,422	-				-1.2
3,564,422	-				-0.2