Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16065

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,504,543	+				-0.6
3,504,543	+				+0.8
3,504,544	-				+0.3
3,504,544	-				-0.6
3,504,544	-				-0.7
3,504,544	-				-1.1
3,504,544	-				+0.8
3,504,544	-				+1.0
3,504,544	-				+0.2
3,504,544	-				+1.4
3,504,545	+				-0.1
3,504,545	+				-0.1
3,504,545	+				-1.0
3,504,545	+				-1.2
3,504,545	+				-0.3
3,504,545	+				-0.7
3,504,545	+				-1.3
3,504,545	+				-0.3
3,504,545	+				-0.9
3,504,545	+				+0.3
3,504,545	+				-0.6
3,504,545	+				-0.2
3,504,545	+				-1.7
3,504,545	+				-0.6
3,504,546	-				+0.9
3,504,546	-				+0.5
3,504,546	-				+0.3
3,504,546	-				-0.3
3,504,546	-				+1.0
3,504,546	-				-0.1
3,504,546	-				+0.7
3,504,546	-				+0.9
3,504,570	+				+0.3
3,504,570	+				-0.6
3,504,570	+				-0.1
3,504,570	+				+0.3
3,504,570	+				-0.3
3,504,570	+				+0.3
3,504,570	+				-0.3
3,504,570	+				-1.0
3,504,570	+				+1.3
3,504,571	-				-1.3
3,504,571	-				-1.7
3,504,571	-				-0.1
3,504,571	-				-1.4
3,504,571	-				-1.3
3,504,571	-				-0.3
3,504,571	-				-0.7
3,504,571	-				-0.3
3,504,709	-	gpmA	OKGIIK_16060	0.19	-2.1
3,504,880	-	gpmA	OKGIIK_16060	0.42	+0.9
3,504,915	+	gpmA	OKGIIK_16060	0.47	-1.5
3,504,915	+	gpmA	OKGIIK_16060	0.47	-1.3
3,504,915	+	gpmA	OKGIIK_16060	0.47	-0.3
3,504,916	-	gpmA	OKGIIK_16060	0.47	+0.3
3,505,047	+	gpmA	OKGIIK_16060	0.65	+0.3
3,505,138	-	gpmA	OKGIIK_16060	0.77	-0.7
3,505,138	-	gpmA	OKGIIK_16060	0.77	-0.3
3,505,138	-	gpmA	OKGIIK_16060	0.77	+1.1
3,505,203	+	gpmA	OKGIIK_16060	0.85	+0.3
3,505,203	+	gpmA	OKGIIK_16060	0.85	+0.4
3,505,203	+	gpmA	OKGIIK_16060	0.85	+0.4
3,505,203	+	gpmA	OKGIIK_16060	0.85	-0.1
3,505,204	-	gpmA	OKGIIK_16060	0.86	+1.3
3,505,204	-	gpmA	OKGIIK_16060	0.86	+0.7
3,505,204	-	gpmA	OKGIIK_16060	0.86	-0.1
3,505,239	+				+1.0
3,505,239	+				-0.9
3,505,239	+				+0.7
3,505,239	+				+1.3
3,505,239	+				+2.3
3,505,239	+				-1.8
3,505,240	-				-0.3
3,505,240	-				+0.8
3,505,240	-				-0.2
3,505,240	-				+0.3
3,505,242	+				-0.1
3,505,242	+				+0.5
3,505,242	+				-0.2
3,505,242	+				+0.3
3,505,242	+				+0.3
3,505,242	+				-1.7
3,505,243	-				-0.6
3,505,243	-				-0.6
3,505,243	-				-1.7
3,505,308	+				-0.9
3,505,309	-				-1.2
3,505,309	-				+0.3
3,505,309	-				+0.2
3,505,309	-				+0.2
3,505,309	-				+0.6
3,505,309	-				-0.1
3,505,309	-				-0.4
3,505,334	-				-0.5
3,505,418	+				+1.0
3,505,418	+				-0.9
3,505,418	+				-0.1
3,505,418	+				-1.0
3,505,499	+				-1.9
3,505,499	+				-0.3
3,505,499	+				+1.2
3,505,499	+				-1.0
3,505,499	+				-0.6
3,505,499	+				-0.2
3,505,500	-				+1.7
3,505,500	-				-1.2
3,505,500	-				+0.9
3,505,500	-				+0.5
3,505,500	-				-2.0
3,505,528	-				-0.3
3,505,555	+				+0.3
3,505,555	+				+0.5
3,505,555	+				+1.5
3,505,555	+				-0.6
3,505,555	+				+1.2
3,505,555	+				+3.5
3,505,555	+				+1.0
3,505,555	+				-0.9
3,505,556	-				-1.1
3,505,556	-				+2.3
3,505,556	-				+2.4
3,505,556	-				+0.5
3,505,556	-				+0.8
3,505,556	-				+1.7
3,505,556	-				+2.0
3,505,556	-				+1.4
3,505,816	+		OKGIIK_16065	0.52	+1.7
3,505,816	+		OKGIIK_16065	0.52	+1.5
3,505,816	+		OKGIIK_16065	0.52	-0.6
3,505,816	+		OKGIIK_16065	0.52	+1.3
3,505,816	+		OKGIIK_16065	0.52	+2.1
3,505,816	+		OKGIIK_16065	0.52	-0.2
3,505,816	+		OKGIIK_16065	0.52	+1.8
3,505,817	-		OKGIIK_16065	0.52	-0.7
3,505,817	-		OKGIIK_16065	0.52	+2.0
3,505,817	-		OKGIIK_16065	0.52	+1.3
3,505,817	-		OKGIIK_16065	0.52	+0.2
3,505,817	-		OKGIIK_16065	0.52	+0.2
3,505,817	-		OKGIIK_16065	0.52	+0.7
3,505,945	+		OKGIIK_16065	0.76	+2.0
3,505,945	+		OKGIIK_16065	0.76	+1.4
3,505,945	+		OKGIIK_16065	0.76	+0.7
3,505,945	+		OKGIIK_16065	0.76	+0.7
3,505,945	+		OKGIIK_16065	0.76	-0.6
3,505,945	+		OKGIIK_16065	0.76	-1.1
3,505,945	+		OKGIIK_16065	0.76	-1.1
3,505,945	+		OKGIIK_16065	0.76	+1.3
3,505,945	+		OKGIIK_16065	0.76	-0.9
3,505,945	+		OKGIIK_16065	0.76	-0.6
3,505,945	+		OKGIIK_16065	0.76	-1.0
3,505,946	-		OKGIIK_16065	0.76	+0.8
3,505,946	-		OKGIIK_16065	0.76	+1.4
3,505,946	-		OKGIIK_16065	0.76	+1.4
3,505,946	-		OKGIIK_16065	0.76	+2.8
3,505,946	-		OKGIIK_16065	0.76	+0.6
3,505,946	-		OKGIIK_16065	0.76	-1.7
3,505,946	-		OKGIIK_16065	0.76	-0.2
3,505,946	-		OKGIIK_16065	0.76	+1.7
3,505,946	-		OKGIIK_16065	0.76	+1.2
3,505,993	+		OKGIIK_16065	0.85	+1.3
3,505,993	+		OKGIIK_16065	0.85	+1.7
3,505,993	+		OKGIIK_16065	0.85	+1.7
3,505,993	+		OKGIIK_16065	0.85	+0.9
3,505,994	-		OKGIIK_16065	0.85	-0.2
3,505,996	+		OKGIIK_16065	0.85	+0.3
3,505,996	+		OKGIIK_16065	0.85	+3.1
3,505,996	+		OKGIIK_16065	0.85	+1.0
3,505,996	+		OKGIIK_16065	0.85	+1.3
3,505,996	+		OKGIIK_16065	0.85	+0.4
3,505,996	+		OKGIIK_16065	0.85	+0.2
3,505,996	+		OKGIIK_16065	0.85	+1.8
3,505,996	+		OKGIIK_16065	0.85	+1.7
3,505,996	+		OKGIIK_16065	0.85	+1.3
3,505,996	+		OKGIIK_16065	0.85	+0.8
3,505,996	+		OKGIIK_16065	0.85	+0.3
3,505,996	+		OKGIIK_16065	0.85	+1.1
3,505,996	+		OKGIIK_16065	0.85	-0.6
3,505,996	+		OKGIIK_16065	0.85	+0.2
3,505,996	+		OKGIIK_16065	0.85	+0.5
3,505,996	+		OKGIIK_16065	0.85	+2.3
3,505,996	+		OKGIIK_16065	0.85	+2.4
3,505,996	+		OKGIIK_16065	0.85	+2.0
3,505,996	+		OKGIIK_16065	0.85	+1.7
3,505,996	+		OKGIIK_16065	0.85	+0.8
3,505,996	+		OKGIIK_16065	0.85	-0.6
3,505,996	+		OKGIIK_16065	0.85	-0.1
3,505,996	+		OKGIIK_16065	0.85	+2.3
3,505,997	-		OKGIIK_16065	0.85	-0.4
3,505,997	-		OKGIIK_16065	0.85	+0.6
3,505,997	-		OKGIIK_16065	0.85	+1.3
3,505,997	-		OKGIIK_16065	0.85	+1.5
3,505,997	-		OKGIIK_16065	0.85	+0.3
3,505,997	-		OKGIIK_16065	0.85	+0.0
3,505,997	-		OKGIIK_16065	0.85	+2.6
3,505,997	-		OKGIIK_16065	0.85	-0.1
3,505,997	-		OKGIIK_16065	0.85	+1.1
3,505,997	-		OKGIIK_16065	0.85	-0.3
3,505,997	-		OKGIIK_16065	0.85	+0.3
3,506,005	+		OKGIIK_16065	0.87	+0.3
3,506,005	+		OKGIIK_16065	0.87	+1.5
3,506,005	+		OKGIIK_16065	0.87	+0.7
3,506,005	+		OKGIIK_16065	0.87	-1.9
3,506,005	+		OKGIIK_16065	0.87	-0.1
3,506,074	+				+0.3
3,506,074	+				+0.7
3,506,074	+				-0.7
3,506,075	-				+0.4
3,506,075	-				-0.7
3,506,075	-				-0.1
3,506,075	-				+0.3
3,506,075	-				-2.9
3,506,131	+				-1.3
3,506,131	+				-1.7
3,506,132	-				-0.3
3,506,132	-				-1.3
3,506,263	+		OKGIIK_16070	0.12	+0.3
3,506,263	+		OKGIIK_16070	0.12	-0.6
3,506,263	+		OKGIIK_16070	0.12	+1.3
3,506,263	+		OKGIIK_16070	0.12	+0.3
3,506,263	+		OKGIIK_16070	0.12	-1.3
3,506,263	+		OKGIIK_16070	0.12	-0.5
3,506,263	+		OKGIIK_16070	0.12	-1.3
3,506,263	+		OKGIIK_16070	0.12	+1.1
3,506,264	-		OKGIIK_16070	0.12	-0.4
3,506,264	-		OKGIIK_16070	0.12	+0.3
3,506,264	-		OKGIIK_16070	0.12	+0.8
3,506,264	-		OKGIIK_16070	0.12	+1.3
3,506,264	-		OKGIIK_16070	0.12	-0.9
3,506,264	-		OKGIIK_16070	0.12	+0.4
3,506,264	-		OKGIIK_16070	0.12	+0.7
3,506,264	-		OKGIIK_16070	0.12	-0.6
3,506,264	-		OKGIIK_16070	0.12	-1.4
3,506,290	+		OKGIIK_16070	0.14	-1.1
3,506,290	+		OKGIIK_16070	0.14	-0.2
3,506,290	+		OKGIIK_16070	0.14	+1.4
3,506,290	+		OKGIIK_16070	0.14	-0.6
3,506,291	-		OKGIIK_16070	0.14	+2.3
3,506,291	-		OKGIIK_16070	0.14	+1.0
3,506,291	-		OKGIIK_16070	0.14	-0.1
3,506,291	-		OKGIIK_16070	0.14	-1.2
3,506,291	-		OKGIIK_16070	0.14	+1.7
3,506,291	-		OKGIIK_16070	0.14	-0.3
3,506,569	+		OKGIIK_16070	0.35	+0.5
3,506,569	+		OKGIIK_16070	0.35	+0.7
3,506,569	+		OKGIIK_16070	0.35	-0.5
3,506,569	+		OKGIIK_16070	0.35	+0.2
3,506,570	-		OKGIIK_16070	0.35	+1.3
3,506,570	-		OKGIIK_16070	0.35	+0.7
3,506,570	-		OKGIIK_16070	0.35	-1.7
3,506,570	-		OKGIIK_16070	0.35	+1.1