Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16040

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,499,650	+				-1.3
3,499,651	-				-0.9
3,499,651	-				-1.3
3,499,651	-				-1.5
3,499,651	-				-0.5
3,499,651	-				-1.6
3,499,651	-				-1.4
3,499,651	-				-2.5
3,499,651	-				-2.5
3,499,651	-				-0.6
3,499,651	-				-1.1
3,499,750	+				-1.4
3,499,750	+				-1.5
3,499,750	+				-2.3
3,499,750	+				-1.3
3,499,751	-				-0.5
3,499,751	-				-2.8
3,499,751	-				-1.9
3,499,751	-				-2.8
3,499,764	-				-1.5
3,499,771	+				-4.2
3,499,795	+		OKGIIK_16035	0.12	-1.3
3,499,795	+		OKGIIK_16035	0.12	-0.5
3,499,795	+		OKGIIK_16035	0.12	-2.5
3,499,795	+		OKGIIK_16035	0.12	-0.6
3,499,795	+		OKGIIK_16035	0.12	-0.8
3,499,795	+		OKGIIK_16035	0.12	-1.3
3,499,795	+		OKGIIK_16035	0.12	-1.3
3,499,795	+		OKGIIK_16035	0.12	-0.8
3,499,795	+		OKGIIK_16035	0.12	-0.5
3,499,795	+		OKGIIK_16035	0.12	-0.1
3,499,795	+		OKGIIK_16035	0.12	-1.1
3,499,795	+		OKGIIK_16035	0.12	-1.3
3,499,795	+		OKGIIK_16035	0.12	-1.6
3,499,795	+		OKGIIK_16035	0.12	-2.3
3,499,795	+		OKGIIK_16035	0.12	-0.1
3,499,796	-		OKGIIK_16035	0.13	+0.7
3,499,796	-		OKGIIK_16035	0.13	-0.9
3,499,796	-		OKGIIK_16035	0.13	-2.3
3,499,796	-		OKGIIK_16035	0.13	-0.5
3,499,796	-		OKGIIK_16035	0.13	-0.8
3,499,796	-		OKGIIK_16035	0.13	-2.1
3,499,796	-		OKGIIK_16035	0.13	-1.3
3,499,796	-		OKGIIK_16035	0.13	-0.6
3,499,796	-		OKGIIK_16035	0.13	-0.1
3,499,796	-		OKGIIK_16035	0.13	-1.3
3,499,796	-		OKGIIK_16035	0.13	-0.6
3,499,796	-		OKGIIK_16035	0.13	-0.3
3,499,796	-		OKGIIK_16035	0.13	-0.8
3,500,148	+		OKGIIK_16035	0.59	+0.3
3,500,148	+		OKGIIK_16035	0.59	-1.3
3,500,148	+		OKGIIK_16035	0.59	-1.5
3,500,148	+		OKGIIK_16035	0.59	-0.5
3,500,149	-		OKGIIK_16035	0.59	+0.2
3,500,149	-		OKGIIK_16035	0.59	-1.5
3,500,212	+		OKGIIK_16035	0.68	-3.4
3,500,212	+		OKGIIK_16035	0.68	-0.8
3,500,212	+		OKGIIK_16035	0.68	+1.9
3,500,212	+		OKGIIK_16035	0.68	-1.2
3,500,212	+		OKGIIK_16035	0.68	-0.8
3,500,212	+		OKGIIK_16035	0.68	-0.6
3,500,213	-		OKGIIK_16035	0.68	-0.8
3,500,213	-		OKGIIK_16035	0.68	-1.1
3,500,213	-		OKGIIK_16035	0.68	-1.5
3,500,213	-		OKGIIK_16035	0.68	-1.1
3,500,451	-				-1.8
3,500,451	-				-2.1
3,500,451	-				-2.1
3,500,451	-				-1.5
3,500,451	-				-1.3
3,500,491	+				+0.5
3,500,492	-				-0.5
3,500,492	-				-0.6
3,500,492	-				-1.9
3,500,492	-				-0.8
3,500,886	+		OKGIIK_16040	0.54	-1.8
3,500,886	+		OKGIIK_16040	0.54	-0.5
3,500,887	-		OKGIIK_16040	0.54	-1.9
3,500,970	+		OKGIIK_16040	0.65	+0.5
3,500,970	+		OKGIIK_16040	0.65	-1.1
3,500,970	+		OKGIIK_16040	0.65	-1.6
3,500,970	+		OKGIIK_16040	0.65	-0.3
3,500,970	+		OKGIIK_16040	0.65	-2.7
3,500,970	+		OKGIIK_16040	0.65	-0.5
3,500,970	+		OKGIIK_16040	0.65	-0.5
3,500,970	+		OKGIIK_16040	0.65	-1.6
3,500,970	+		OKGIIK_16040	0.65	-1.7
3,500,970	+		OKGIIK_16040	0.65	-1.6
3,500,970	+		OKGIIK_16040	0.65	-1.8
3,500,970	+		OKGIIK_16040	0.65	-0.2
3,500,970	+		OKGIIK_16040	0.65	-2.6
3,500,970	+		OKGIIK_16040	0.65	-0.8
3,500,970	+		OKGIIK_16040	0.65	-1.1
3,500,970	+		OKGIIK_16040	0.65	-0.8
3,500,970	+		OKGIIK_16040	0.65	-0.8
3,500,970	+		OKGIIK_16040	0.65	-1.6
3,500,970	+		OKGIIK_16040	0.65	-0.3
3,500,970	+		OKGIIK_16040	0.65	-0.1
3,500,970	+		OKGIIK_16040	0.65	-0.2
3,500,970	+		OKGIIK_16040	0.65	-1.8
3,500,970	+		OKGIIK_16040	0.65	-2.5
3,500,970	+		OKGIIK_16040	0.65	-1.1
3,500,970	+		OKGIIK_16040	0.65	-2.7
3,500,970	+		OKGIIK_16040	0.65	-0.9
3,500,970	+		OKGIIK_16040	0.65	+0.2
3,500,970	+		OKGIIK_16040	0.65	-0.5
3,500,970	+		OKGIIK_16040	0.65	+1.0
3,500,970	+		OKGIIK_16040	0.65	-2.8
3,500,970	+		OKGIIK_16040	0.65	-1.3
3,500,970	+		OKGIIK_16040	0.65	+0.3
3,500,971	-		OKGIIK_16040	0.65	-1.6
3,500,971	-		OKGIIK_16040	0.65	-0.5
3,500,971	-		OKGIIK_16040	0.65	-2.3
3,500,971	-		OKGIIK_16040	0.65	-0.8
3,500,971	-		OKGIIK_16040	0.65	-1.3
3,500,971	-		OKGIIK_16040	0.65	-0.8
3,500,971	-		OKGIIK_16040	0.65	-2.2
3,500,971	-		OKGIIK_16040	0.65	-3.5
3,500,971	-		OKGIIK_16040	0.65	-0.1
3,500,971	-		OKGIIK_16040	0.65	-2.7
3,500,971	-		OKGIIK_16040	0.65	-1.5
3,500,971	-		OKGIIK_16040	0.65	-0.5
3,500,971	-		OKGIIK_16040	0.65	-2.6
3,500,971	-		OKGIIK_16040	0.65	-1.1
3,500,971	-		OKGIIK_16040	0.65	-0.8
3,500,971	-		OKGIIK_16040	0.65	-0.8
3,500,971	-		OKGIIK_16040	0.65	-1.9
3,500,971	-		OKGIIK_16040	0.65	-0.6
3,500,971	-		OKGIIK_16040	0.65	-1.6
3,500,971	-		OKGIIK_16040	0.65	-1.3
3,500,971	-		OKGIIK_16040	0.65	-0.6
3,500,971	-		OKGIIK_16040	0.65	-0.8
3,500,971	-		OKGIIK_16040	0.65	-2.6
3,500,971	-		OKGIIK_16040	0.65	-0.8
3,501,231	+				-0.5
3,501,231	+				-0.8
3,501,231	+				-0.8
3,501,231	+				+0.5
3,501,231	+				-1.3
3,501,231	+				-0.5
3,501,232	-				-2.2
3,501,232	-				-1.3
3,501,232	-				-0.5
3,501,232	-				-1.1
3,501,232	-				-1.8
3,501,232	-				-1.5
3,501,232	-				-0.7
3,501,232	-				-0.8
3,501,385	-		OKGIIK_16045	0.12	+0.4
3,501,548	+		OKGIIK_16045	0.25	+0.5
3,501,587	+		OKGIIK_16045	0.28	-0.8
3,501,587	+		OKGIIK_16045	0.28	-0.6
3,501,587	+		OKGIIK_16045	0.28	-0.5
3,501,587	+		OKGIIK_16045	0.28	+0.2
3,501,587	+		OKGIIK_16045	0.28	-1.1
3,501,587	+		OKGIIK_16045	0.28	-2.5
3,501,587	+		OKGIIK_16045	0.28	-0.3
3,501,587	+		OKGIIK_16045	0.28	-2.3
3,501,587	+		OKGIIK_16045	0.28	-2.6
3,501,587	+		OKGIIK_16045	0.28	-1.6
3,501,587	+		OKGIIK_16045	0.28	-1.5
3,501,587	+		OKGIIK_16045	0.28	-0.8
3,501,587	+		OKGIIK_16045	0.28	-0.8
3,501,587	+		OKGIIK_16045	0.28	-1.1
3,501,587	+		OKGIIK_16045	0.28	-0.1
3,501,588	-		OKGIIK_16045	0.29	-2.9
3,501,588	-		OKGIIK_16045	0.29	-3.0
3,501,588	-		OKGIIK_16045	0.29	-1.6
3,501,588	-		OKGIIK_16045	0.29	-1.1
3,501,588	-		OKGIIK_16045	0.29	-1.6
3,501,588	-		OKGIIK_16045	0.29	-0.8
3,501,588	-		OKGIIK_16045	0.29	-0.5
3,501,588	-		OKGIIK_16045	0.29	+1.1
3,501,588	-		OKGIIK_16045	0.29	-0.5
3,501,588	-		OKGIIK_16045	0.29	-1.5
3,501,588	-		OKGIIK_16045	0.29	-1.6
3,501,588	-		OKGIIK_16045	0.29	-0.5
3,501,588	-		OKGIIK_16045	0.29	-1.6
3,501,588	-		OKGIIK_16045	0.29	-1.6
3,501,588	-		OKGIIK_16045	0.29	-0.6
3,501,588	-		OKGIIK_16045	0.29	-1.5
3,501,588	-		OKGIIK_16045	0.29	-1.5
3,501,588	-		OKGIIK_16045	0.29	-0.5
3,501,588	-		OKGIIK_16045	0.29	-0.8
3,501,588	-		OKGIIK_16045	0.29	-0.7
3,501,588	-		OKGIIK_16045	0.29	-2.4
3,502,094	+		OKGIIK_16045	0.71	-0.9
3,502,094	+		OKGIIK_16045	0.71	-2.4
3,502,095	-		OKGIIK_16045	0.71	-3.1
3,502,095	-		OKGIIK_16045	0.71	-0.1