Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15860

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,463,707	+				-1.2
3,463,707	+				+0.8
3,463,707	+				-0.3
3,463,707	+				+1.8
3,463,707	+				-0.3
3,463,707	+				-1.5
3,463,707	+				-1.9
3,463,707	+				-0.8
3,463,707	+				-1.4
3,463,707	+				+0.8
3,463,707	+				+0.5
3,463,707	+				+1.0
3,463,708	-				+0.5
3,463,708	-				-0.1
3,463,708	-				+0.3
3,463,708	-				-1.7
3,463,708	-				+0.3
3,463,708	-				-0.5
3,463,708	-				-0.8
3,463,708	-				+1.3
3,463,708	-				+1.3
3,463,708	-				-1.3
3,463,708	-				+0.5
3,463,709	+				-0.1
3,463,709	+				-0.3
3,463,709	+				-0.9
3,463,709	+				-1.0
3,463,709	+				+0.3
3,463,710	-				-1.1
3,463,710	-				-0.5
3,463,710	-				-0.4
3,463,710	-				-2.3
3,463,710	-				-0.7
3,463,710	-				+0.1
3,463,818	+				+0.9
3,463,818	+				+0.1
3,463,923	+	bfr	OKGIIK_15850	0.28	-0.3
3,463,923	+	bfr	OKGIIK_15850	0.28	-0.9
3,463,923	+	bfr	OKGIIK_15850	0.28	-0.6
3,463,924	-	bfr	OKGIIK_15850	0.28	+0.5
3,463,924	-	bfr	OKGIIK_15850	0.28	-1.2
3,463,924	-	bfr	OKGIIK_15850	0.28	+1.1
3,463,924	-	bfr	OKGIIK_15850	0.28	-0.1
3,463,924	-	bfr	OKGIIK_15850	0.28	-0.2
3,463,944	+	bfr	OKGIIK_15850	0.32	-1.1
3,463,944	+	bfr	OKGIIK_15850	0.32	-0.1
3,464,130	+	bfr	OKGIIK_15850	0.72	-1.3
3,464,130	+	bfr	OKGIIK_15850	0.72	-0.8
3,464,130	+	bfr	OKGIIK_15850	0.72	-0.5
3,464,130	+	bfr	OKGIIK_15850	0.72	+1.5
3,464,130	+	bfr	OKGIIK_15850	0.72	-0.9
3,464,130	+	bfr	OKGIIK_15850	0.72	-0.8
3,464,130	+	bfr	OKGIIK_15850	0.72	-2.1
3,464,130	+	bfr	OKGIIK_15850	0.72	-0.3
3,464,130	+	bfr	OKGIIK_15850	0.72	+0.3
3,464,130	+	bfr	OKGIIK_15850	0.72	-1.7
3,464,130	+	bfr	OKGIIK_15850	0.72	-2.0
3,464,130	+	bfr	OKGIIK_15850	0.72	-0.9
3,464,130	+	bfr	OKGIIK_15850	0.72	-0.4
3,464,131	-	bfr	OKGIIK_15850	0.72	+0.8
3,464,131	-	bfr	OKGIIK_15850	0.72	-1.4
3,464,131	-	bfr	OKGIIK_15850	0.72	+1.0
3,464,131	-	bfr	OKGIIK_15850	0.72	-0.1
3,464,131	-	bfr	OKGIIK_15850	0.72	+0.7
3,464,131	-	bfr	OKGIIK_15850	0.72	+0.7
3,464,131	-	bfr	OKGIIK_15850	0.72	-0.1
3,464,155	-	bfr	OKGIIK_15850	0.77	-1.7
3,464,190	+	bfr	OKGIIK_15850	0.84	+0.1
3,464,190	+	bfr	OKGIIK_15850	0.84	+1.1
3,464,190	+	bfr	OKGIIK_15850	0.84	+0.2
3,464,190	+	bfr	OKGIIK_15850	0.84	-1.9
3,464,190	+	bfr	OKGIIK_15850	0.84	+0.1
3,464,191	-	bfr	OKGIIK_15850	0.85	+0.5
3,464,191	-	bfr	OKGIIK_15850	0.85	+0.2
3,464,191	-	bfr	OKGIIK_15850	0.85	+0.9
3,464,191	-	bfr	OKGIIK_15850	0.85	+0.3
3,464,191	-	bfr	OKGIIK_15850	0.85	-1.2
3,464,217	+				+0.3
3,464,217	+				-0.3
3,464,217	+				+2.3
3,464,217	+				-0.7
3,464,217	+				+0.3
3,464,217	+				+0.9
3,464,217	+				-0.3
3,464,218	-				-0.2
3,464,218	-				+0.3
3,464,218	-				-0.1
3,464,218	-				+0.1
3,464,218	-				-0.1
3,464,218	-				+0.3
3,464,218	-				-0.1
3,464,218	-				-2.2
3,464,218	-				-1.5
3,464,218	-				-0.9
3,464,295	+				-0.3
3,464,295	+				+0.1
3,464,295	+				+0.1
3,464,296	-				-0.3
3,464,296	-				+0.3
3,464,296	-				+1.3
3,464,296	-				+0.1
3,464,297	+				-0.6
3,464,297	+				-0.4
3,464,297	+				-0.5
3,464,297	+				-0.2
3,464,297	+				-0.9
3,464,297	+				-0.4
3,464,297	+				-2.1
3,464,297	+				+0.5
3,464,297	+				+0.3
3,464,297	+				+1.3
3,464,297	+				-2.4
3,464,297	+				+1.0
3,464,297	+				-1.5
3,464,297	+				-2.1
3,464,297	+				-0.2
3,464,297	+				-0.9
3,464,297	+				-0.9
3,464,297	+				-2.1
3,464,297	+				-0.3
3,464,298	-				-1.8
3,464,298	-				-1.4
3,464,298	-				-0.1
3,464,298	-				+0.1
3,464,298	-				-0.4
3,464,298	-				-1.4
3,464,298	-				-0.9
3,464,298	-				-1.3
3,464,298	-				-0.1
3,464,298	-				-0.1
3,464,298	-				-2.8
3,464,298	-				-1.3
3,464,298	-				-0.3
3,464,298	-				-1.7
3,464,587	+				-1.1
3,464,587	+				-0.5
3,464,587	+				-0.3
3,464,587	+				-1.7
3,464,587	+				-0.3
3,464,587	+				+1.3
3,464,587	+				-1.1
3,464,587	+				-0.1
3,464,587	+				-1.4
3,464,587	+				+0.1
3,464,587	+				+1.7
3,464,587	+				-0.1
3,464,587	+				-1.4
3,464,587	+				-0.8
3,464,587	+				-0.5
3,464,587	+				+0.3
3,464,587	+				-0.9
3,464,587	+				+0.0
3,464,587	+				-0.1
3,464,587	+				+1.9
3,464,587	+				-0.5
3,464,587	+				-0.4
3,464,587	+				+0.8
3,464,587	+				-1.2
3,464,587	+				-0.0
3,464,587	+				+1.3
3,464,587	+				+1.4
3,464,587	+				-0.5
3,464,587	+				-0.5
3,464,587	+				-1.5
3,464,587	+				-2.7
3,464,587	+				+0.1
3,464,588	-				+2.0
3,464,588	-				+1.5
3,464,588	-				-0.1
3,464,588	-				+0.9
3,464,588	-				-0.9
3,464,588	-				-0.5
3,464,588	-				-0.4
3,464,588	-				-0.9
3,464,588	-				-0.5
3,464,588	-				-0.3
3,464,588	-				-0.2
3,464,588	-				-0.5
3,464,588	-				-0.6
3,464,588	-				-1.3
3,464,588	-				+0.6
3,464,588	-				-0.9
3,464,588	-				-0.1
3,464,588	-				+1.9
3,464,588	-				-0.4
3,464,588	-				+0.0
3,464,588	-				-0.5
3,464,588	-				+1.4
3,464,588	-				-0.1
3,464,588	-				-0.2
3,464,588	-				-0.5
3,464,588	-				+0.3
3,464,588	-				-0.4
3,464,588	-				-2.6
3,464,588	-				+0.3
3,464,588	-				-0.3
3,464,588	-				-0.7
3,464,588	-				-0.5
3,464,588	-				-1.3
3,464,588	-				+0.0
3,464,588	-				-0.5
3,464,588	-				+0.3
3,464,588	-				-0.6
3,464,588	-				-0.5
3,464,588	-				-0.1
3,464,588	-				-0.3
3,464,588	-				-1.5
3,464,588	-				+0.3
3,464,720	+		OKGIIK_15860	0.11	+0.3
3,464,720	+		OKGIIK_15860	0.11	+0.5
3,464,721	-		OKGIIK_15860	0.11	+0.3
3,464,721	-		OKGIIK_15860	0.11	-1.1
3,464,721	-		OKGIIK_15860	0.11	-0.9
3,464,721	-		OKGIIK_15860	0.11	-0.6
3,464,721	-		OKGIIK_15860	0.11	+0.8
3,464,753	+		OKGIIK_15860	0.17	-0.3
3,464,753	+		OKGIIK_15860	0.17	-0.1
3,464,754	-		OKGIIK_15860	0.17	-2.2
3,464,787	+		OKGIIK_15860	0.23	-0.5
3,464,787	+		OKGIIK_15860	0.23	+0.1
3,464,787	+		OKGIIK_15860	0.23	-0.3
3,464,787	+		OKGIIK_15860	0.23	-1.3
3,464,787	+		OKGIIK_15860	0.23	+0.3
3,464,788	-		OKGIIK_15860	0.23	+2.6
3,464,788	-		OKGIIK_15860	0.23	-1.7
3,464,788	-		OKGIIK_15860	0.23	-0.5
3,464,788	-		OKGIIK_15860	0.23	-0.4
3,464,788	-		OKGIIK_15860	0.23	-1.0
3,464,788	-		OKGIIK_15860	0.23	+0.3
3,464,970	+		OKGIIK_15860	0.56	-0.4
3,464,970	+		OKGIIK_15860	0.56	+1.6
3,464,970	+		OKGIIK_15860	0.56	-0.1
3,464,970	+		OKGIIK_15860	0.56	-0.9
3,464,970	+		OKGIIK_15860	0.56	-1.4
3,464,970	+		OKGIIK_15860	0.56	+1.8
3,464,971	-		OKGIIK_15860	0.56	-2.5
3,464,971	-		OKGIIK_15860	0.56	+1.3
3,464,971	-		OKGIIK_15860	0.56	-0.3
3,464,971	-		OKGIIK_15860	0.56	-1.3
3,465,066	+		OKGIIK_15860	0.73	-0.9
3,465,066	+		OKGIIK_15860	0.73	+1.1
3,465,067	-		OKGIIK_15860	0.73	+1.3
3,465,067	-		OKGIIK_15860	0.73	+0.5
3,465,067	-		OKGIIK_15860	0.73	+0.3
3,465,067	-		OKGIIK_15860	0.73	+0.2
3,465,067	-		OKGIIK_15860	0.73	-0.7
3,465,067	-		OKGIIK_15860	0.73	-1.2
3,465,067	-		OKGIIK_15860	0.73	+0.4
3,465,094	+		OKGIIK_15860	0.78	+1.7
3,465,094	+		OKGIIK_15860	0.78	-0.1
3,465,094	+		OKGIIK_15860	0.78	-1.1
3,465,094	+		OKGIIK_15860	0.78	-1.2
3,465,094	+		OKGIIK_15860	0.78	-1.1
3,465,094	+		OKGIIK_15860	0.78	+0.1
3,465,094	+		OKGIIK_15860	0.78	-0.8
3,465,095	-		OKGIIK_15860	0.78	+0.5
3,465,095	-		OKGIIK_15860	0.78	+1.8
3,465,095	-		OKGIIK_15860	0.78	+0.3
3,465,095	-		OKGIIK_15860	0.78	+1.1
3,465,095	-		OKGIIK_15860	0.78	-0.9
3,465,095	-		OKGIIK_15860	0.78	+0.5
3,465,198	+				+0.5
3,465,264	+				+2.3
3,465,264	+				-1.7
3,465,264	+				-2.5
3,465,264	+				-1.8
3,465,265	-				+1.5
3,465,265	-				+1.3
3,465,265	-				-0.3
3,465,593	+				-0.4
3,465,605	+				-0.7
3,465,606	-				+0.5
3,465,614	-				-1.6
3,465,641	-				+0.1
3,465,785	+				-0.9
3,465,785	+				-2.7
3,465,800	+				+0.7
3,465,800	+				+0.3
3,465,800	+				-1.1
3,465,800	+				-1.3
3,465,801	-				-0.3
3,465,801	-				-0.9
3,465,801	-				+0.2
3,465,801	-				-1.6
3,465,801	-				-1.4
3,465,801	-				+0.7
3,465,852	+		OKGIIK_15870	0.14	-1.9
3,465,853	-		OKGIIK_15870	0.14	+0.5
3,465,853	-		OKGIIK_15870	0.14	+0.7
3,465,853	-		OKGIIK_15870	0.14	-0.7
3,465,970	+		OKGIIK_15870	0.24	-0.3
3,465,970	+		OKGIIK_15870	0.24	+0.9
3,465,970	+		OKGIIK_15870	0.24	-0.8
3,465,970	+		OKGIIK_15870	0.24	+0.9
3,465,970	+		OKGIIK_15870	0.24	-1.3
3,465,970	+		OKGIIK_15870	0.24	-1.3
3,465,970	+		OKGIIK_15870	0.24	-0.9
3,465,970	+		OKGIIK_15870	0.24	+0.4
3,465,970	+		OKGIIK_15870	0.24	+1.0
3,465,971	-		OKGIIK_15870	0.24	-1.1
3,465,971	-		OKGIIK_15870	0.24	-0.2
3,465,971	-		OKGIIK_15870	0.24	+0.9
3,465,971	-		OKGIIK_15870	0.24	+1.3
3,465,971	-		OKGIIK_15870	0.24	-0.7
3,465,971	-		OKGIIK_15870	0.24	-0.8
3,465,971	-		OKGIIK_15870	0.24	-0.3
3,465,971	-		OKGIIK_15870	0.24	-0.7
3,465,971	-		OKGIIK_15870	0.24	+1.1
3,465,971	-		OKGIIK_15870	0.24	-2.0
3,465,971	-		OKGIIK_15870	0.24	-0.5
3,465,971	-		OKGIIK_15870	0.24	+0.5
3,466,197	+		OKGIIK_15870	0.42	-2.6
3,466,197	+		OKGIIK_15870	0.42	-2.4
3,466,197	+		OKGIIK_15870	0.42	-1.3
3,466,198	-		OKGIIK_15870	0.42	-0.8
3,466,198	-		OKGIIK_15870	0.42	+0.4